Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--0035
(712 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g14170.1 68415.m01578 methylmalonate-semialdehyde dehydrogena... 118 4e-27
At1g74920.1 68414.m08691 betaine-aldehyde dehydrogenase, putativ... 62 3e-10
At3g48170.1 68416.m05254 betaine-aldehyde dehydrogenase, putativ... 59 2e-09
At3g24503.1 68416.m03074 aldehyde dehydrogenase (ALDH1a) identic... 56 2e-08
At1g79440.1 68414.m09258 succinate-semialdehyde dehydrogenase (S... 47 1e-05
At1g23800.1 68414.m03002 aldehyde dehydrogenase, mitochondrial (... 46 3e-05
At3g48000.1 68416.m05233 aldehyde dehydrogenase (ALDH2) identica... 44 8e-05
At1g54100.2 68414.m06167 aldehyde dehydrogenase, putative / anti... 44 8e-05
At1g54100.1 68414.m06166 aldehyde dehydrogenase, putative / anti... 44 8e-05
At4g34240.1 68417.m04867 aldehyde dehydrogenase (ALDH3) similar ... 42 4e-04
At2g24270.2 68415.m02900 NADP-dependent glyceraldehyde-3-phospha... 42 4e-04
At2g24270.1 68415.m02899 NADP-dependent glyceraldehyde-3-phospha... 42 4e-04
At4g36250.1 68417.m05156 aldehyde dehydrogenase family protein c... 42 5e-04
At1g44170.2 68414.m05102 aldehyde dehydrogenase, putative (ALDH)... 39 0.004
At1g44170.1 68414.m05101 aldehyde dehydrogenase, putative (ALDH)... 39 0.004
At3g66658.2 68416.m00781 betaine-aldehyde dehydrogenase, putativ... 38 0.005
At3g66658.1 68416.m00782 betaine-aldehyde dehydrogenase, putativ... 38 0.005
At4g34320.1 68417.m04878 expressed protein similar to At14a, GI:... 31 0.75
At3g53390.1 68416.m05892 transducin family protein / WD-40 repea... 29 4.0
At3g46050.1 68416.m04983 kelch repeat-containing F-box family pr... 28 5.3
At1g56080.1 68414.m06439 expressed protein 28 5.3
At3g19080.1 68416.m02423 SWIB complex BAF60b domain-containing p... 28 7.0
At1g48840.1 68414.m05468 expressed protein contains Pfam profile... 28 7.0
At4g03630.1 68417.m00498 root nodule development protein-related... 27 9.3
>At2g14170.1 68415.m01578 methylmalonate-semialdehyde dehydrogenase,
putative similar to methylmalonate-semialdehyde
dehydrogenase [acylating], mitochondrial precursor
(MMSDH) [Rattus norvegicus] SWISS-PROT:Q02253
Length = 607
Score = 118 bits (284), Expect = 4e-27
Identities = 50/83 (60%), Positives = 67/83 (80%)
Frame = +2
Query: 5 TRQDPGATLMMMELLQEAGAPPGVVNIIHGTHGAVNFICDQPEIKAVSFVGGDAAGKHIY 184
+ +DPGA++++ EL EAG P GV+NI+HGT+ VN ICD +I+AVSFVG + AG HIY
Sbjct: 285 SEKDPGASVILAELAMEAGLPDGVLNIVHGTNDTVNAICDDEDIRAVSFVGSNTAGMHIY 344
Query: 185 TRASAAGKRVQSNMGAKNHGVIM 253
RA+A GKR+QSNMGAKNHG+++
Sbjct: 345 ARAAAKGKRIQSNMGAKNHGLVL 367
Score = 105 bits (252), Expect = 3e-23
Identities = 45/65 (69%), Positives = 53/65 (81%)
Frame = +3
Query: 510 KLALDGRAVKVPGFEKGNFVGPTIITDVTPSMECYKEEIFGPVLVCLFVETLDEAIQMIN 689
KL LDGR + VPG+EKGNF+GPTI++ VTP MECYKEEIFGPVLVC+ + DEAI +IN
Sbjct: 454 KLLLDGRDIVVPGYEKGNFIGPTILSGVTPDMECYKEEIFGPVLVCMQANSFDEAISIIN 513
Query: 690 SNPYG 704
N YG
Sbjct: 514 KNKYG 518
Score = 94.3 bits (224), Expect = 7e-20
Identities = 52/107 (48%), Positives = 60/107 (56%)
Frame = +1
Query: 256 DANKEHTLNQLXXXXXXXXXQRCMALSTAVFVGSAKEWIPDLVKREQALKVNAGHVPGTD 435
DAN + TLN L QRCMALST VFVG AK W LV+R +ALKV G P D
Sbjct: 369 DANIDATLNALLAAGFGAAGQRCMALSTVVFVGDAKSWEDKLVERAKALKVTCGSEPDAD 428
Query: 436 VGPVISVAAKDRILRLVESGVKEGVNWLSTVARSKYPDSRKAISSGP 576
+GPVIS AK+RI RL++SGV +G L P K GP
Sbjct: 429 LGPVISKQAKERICRLIQSGVDDGAKLLLDGRDIVVPGYEKGNFIGP 475
>At1g74920.1 68414.m08691 betaine-aldehyde dehydrogenase, putative
identical to betaine-aldehyde dehydrogenase, chloroplast
precursor (BADH) [Arabidopsis thaliana]
SWISS-PROT:Q9S795; strong similarity to betaine aldehyde
dehydrogenase [Amaranthus hypochondriacus] GI:2388710
Length = 501
Score = 62.5 bits (145), Expect = 3e-10
Identities = 28/52 (53%), Positives = 38/52 (73%)
Frame = +3
Query: 552 EKGNFVGPTIITDVTPSMECYKEEIFGPVLVCLFVETLDEAIQMINSNPYGM 707
EKG F+ PTIITDVT SM+ ++EE+FGPVL + DEAI++ N + YG+
Sbjct: 370 EKGFFIEPTIITDVTTSMQIWREEVFGPVLCVKTFASEDEAIELANDSHYGL 421
Score = 42.3 bits (95), Expect = 3e-04
Identities = 20/71 (28%), Positives = 35/71 (49%), Gaps = 1/71 (1%)
Frame = +2
Query: 29 LMMMELLQEAGAPPGVVNIIHGTHGAVNF-ICDQPEIKAVSFVGGDAAGKHIYTRASAAG 205
L + ++ +E G PPGV+N++ G + P + ++F G A G + T A+
Sbjct: 195 LELADICREVGLPPGVLNVLTGFGSEAGAPLASHPGVDKIAFTGSFATGSKVMTAAAQLV 254
Query: 206 KRVQSNMGAKN 238
K V +G K+
Sbjct: 255 KPVSMELGGKS 265
Score = 35.9 bits (79), Expect = 0.027
Identities = 23/77 (29%), Positives = 39/77 (50%), Gaps = 1/77 (1%)
Frame = +1
Query: 316 QRCMALSTAVFVGS-AKEWIPDLVKREQALKVNAGHVPGTDVGPVISVAAKDRILRLVES 492
Q C A S + S A E+I LVK + +K++ G +GPV+S ++IL+ + +
Sbjct: 292 QICSATSRLLVHESIASEFIEKLVKWSKNIKISDPMEEGCRLGPVVSKGQYEKILKFIST 351
Query: 493 GVKEGVNWLSTVARSKY 543
EG L +R ++
Sbjct: 352 AKSEGATILHGGSRPEH 368
>At3g48170.1 68416.m05254 betaine-aldehyde dehydrogenase, putative
similar to betaine-aldehyde dehydrogenase, chloroplast
precursor (BADH) [Arabidopsis thaliana]
SWISS-PROT:Q9S795
Length = 503
Score = 59.3 bits (137), Expect = 2e-09
Identities = 27/58 (46%), Positives = 38/58 (65%)
Frame = +3
Query: 534 VKVPGFEKGNFVGPTIITDVTPSMECYKEEIFGPVLVCLFVETLDEAIQMINSNPYGM 707
V+ +KG FV P I+++VT SME ++EE+FGP L T DEAIQ+ N + YG+
Sbjct: 364 VRPEHLKKGYFVEPAIVSNVTTSMEIWREEVFGPALCVKTFSTEDEAIQLANDSQYGL 421
Score = 41.1 bits (92), Expect = 7e-04
Identities = 21/71 (29%), Positives = 33/71 (46%), Gaps = 1/71 (1%)
Frame = +2
Query: 29 LMMMELLQEAGAPPGVVNIIHGTHGAVNF-ICDQPEIKAVSFVGGDAAGKHIYTRASAAG 205
L + ++ +E G PPGV+NI+ G + P + + F G G I T A+
Sbjct: 195 LELADICREVGLPPGVLNILTGLGTEAGAPLASHPHVDKIVFTGSTTTGSSIMTSAAKLV 254
Query: 206 KRVQSNMGAKN 238
K V +G K+
Sbjct: 255 KPVSLELGGKS 265
Score = 34.3 bits (75), Expect = 0.081
Identities = 23/77 (29%), Positives = 37/77 (48%), Gaps = 1/77 (1%)
Frame = +1
Query: 316 QRCMALSTA-VFVGSAKEWIPDLVKREQALKVNAGHVPGTDVGPVISVAAKDRILRLVES 492
Q C A S V A E++ LVK + +K++ G +GPV+S +R+L+ V +
Sbjct: 292 QICSATSRLLVHERIADEFLDKLVKWTKNIKISDPFEEGCRLGPVVSKGQYERVLKFVSN 351
Query: 493 GVKEGVNWLSTVARSKY 543
EG L R ++
Sbjct: 352 ARNEGATVLCGGVRPEH 368
>At3g24503.1 68416.m03074 aldehyde dehydrogenase (ALDH1a) identical
to aldehyde dehydrogenase ALDH1a [Arabidopsis thaliana]
gi|20530143|gb|AAM27004
Length = 501
Score = 56.4 bits (130), Expect = 2e-08
Identities = 23/52 (44%), Positives = 36/52 (69%)
Frame = +3
Query: 552 EKGNFVGPTIITDVTPSMECYKEEIFGPVLVCLFVETLDEAIQMINSNPYGM 707
+KG F+ PTI DVT M+ Y++EIFGPV+ + +T++E I+ N+ YG+
Sbjct: 376 DKGYFIQPTIFADVTEDMKIYQDEIFGPVMSLMKFKTVEEGIKCANNTKYGL 427
Score = 40.7 bits (91), Expect = 0.001
Identities = 27/76 (35%), Positives = 39/76 (51%), Gaps = 4/76 (5%)
Frame = +2
Query: 23 ATLMMMELLQEAGAPPGVVNIIHG---THGAVNFICDQPEIKAVSFVGGDAAGKHIYTRA 193
+ L L +EAG P GV+NI+ G T GA I ++ VSF G G+ I A
Sbjct: 200 SALFYAHLSKEAGIPDGVLNIVTGFGSTAGAA--IASHMDVDKVSFTGSTDVGRKIMQAA 257
Query: 194 SAAG-KRVQSNMGAKN 238
+A+ K+V +G K+
Sbjct: 258 AASNLKKVSLELGGKS 273
>At1g79440.1 68414.m09258 succinate-semialdehyde dehydrogenase
(SSADH1) similar to succinate-semialdehyde dehydrogenase
[NADP+] (SSDH) [Escherichia coli] SWISS-PROT:P25526;
identical to succinic semialdehyde dehydrogenase mRNA,
nuclear gene encoding mitochondrial protein GI:6684441;
contains TIGRfam profile TIGR01780:succinic semialdehyde
dehydrogenase; contains Pfam profile PF00171: aldehyde
dehydrogenase (NAD) family protein
Length = 528
Score = 47.2 bits (107), Expect = 1e-05
Identities = 21/79 (26%), Positives = 39/79 (49%), Gaps = 1/79 (1%)
Frame = +2
Query: 17 PGATLMMMELLQEAGAPPGVVNIIHGTHGAV-NFICDQPEIKAVSFVGGDAAGKHIYTRA 193
P L EL +AG PPG +N++ G + + + P+++ ++F G A GK + A
Sbjct: 228 PLTALAAAELALQAGVPPGALNVVMGNAPEIGDALLTSPQVRKITFTGSTAVGKKLMAAA 287
Query: 194 SAAGKRVQSNMGAKNHGVI 250
+ K+V +G ++
Sbjct: 288 APTVKKVSLELGGNAPSIV 306
Score = 41.1 bits (92), Expect = 7e-04
Identities = 20/48 (41%), Positives = 30/48 (62%)
Frame = +3
Query: 564 FVGPTIITDVTPSMECYKEEIFGPVLVCLFVETLDEAIQMINSNPYGM 707
F PT+I DV+ +M KEEIFGPV + +T ++AI++ N G+
Sbjct: 409 FYEPTVIRDVSDNMIMSKEEIFGPVAPLIRFKTEEDAIRIANDTIAGL 456
>At1g23800.1 68414.m03002 aldehyde dehydrogenase, mitochondrial
(ALDH3) nearly identical to mitochondrial aldehyde
dehydrogenase ALDH3 [Arabidopsis thaliana]
gi|19850249|gb|AAL99612; contains Pfam profile PF00171:
aldehyde dehydrogenase (NAD) family protein
Length = 534
Score = 45.6 bits (103), Expect = 3e-05
Identities = 21/51 (41%), Positives = 30/51 (58%)
Frame = +3
Query: 555 KGNFVGPTIITDVTPSMECYKEEIFGPVLVCLFVETLDEAIQMINSNPYGM 707
KG ++ PT+ +DV M +EIFGPV L + LDE I N++ YG+
Sbjct: 410 KGYYIQPTVFSDVKDDMLIATDEIFGPVQTILKFKDLDEVIARANNSRYGL 460
Score = 45.2 bits (102), Expect = 4e-05
Identities = 31/84 (36%), Positives = 44/84 (52%), Gaps = 4/84 (4%)
Frame = +2
Query: 11 QDPGATLMMMELLQEAGAPPGVVNIIHG---THGAVNFICDQPEIKAVSFVGGDAAGKHI 181
Q P + L++ +LL EAG P GVVNI+ G T GA I ++ V+F G GK I
Sbjct: 229 QTPLSALLVGKLLHEAGLPDGVVNIVSGFGATAGAA--IASHMDVDKVAFTGSTDVGKII 286
Query: 182 YTRASAAG-KRVQSNMGAKNHGVI 250
AS + K V +G K+ ++
Sbjct: 287 LELASKSNLKAVTLELGGKSPFIV 310
>At3g48000.1 68416.m05233 aldehyde dehydrogenase (ALDH2) identical
to aldehyde dehydrogenase [Arabidopsis thaliana]
GI:8574427; similar to mitochondrial aldehyde
dehydrogenase [Arabidopsis thaliana]
gi|19850249|gb|AAL99612; identical to cDNA aldehyde
dehydrogenase AtALDH2a GI:20530140
Length = 538
Score = 44.4 bits (100), Expect = 8e-05
Identities = 20/52 (38%), Positives = 30/52 (57%)
Frame = +3
Query: 552 EKGNFVGPTIITDVTPSMECYKEEIFGPVLVCLFVETLDEAIQMINSNPYGM 707
+KG F+ PT+ ++V M ++EIFGPV L +DE I+ N YG+
Sbjct: 413 DKGYFIQPTVFSNVKDDMLIAQDEIFGPVQSILKFSDVDEVIKRANETKYGL 464
Score = 36.3 bits (80), Expect = 0.020
Identities = 26/84 (30%), Positives = 40/84 (47%), Gaps = 4/84 (4%)
Frame = +2
Query: 11 QDPGATLMMMELLQEAGAPPGVVNIIHG---THGAVNFICDQPEIKAVSFVGGDAAGKHI 181
Q P +L EAG PPGV+NI+ G T GA + ++ ++F G GK I
Sbjct: 233 QTPLTAFYAGKLFLEAGLPPGVLNIVSGFGATAGAA--LASHMDVDKLAFTGSTDTGKVI 290
Query: 182 YTRASAAG-KRVQSNMGAKNHGVI 250
A+ + K V +G K+ ++
Sbjct: 291 LGLAANSNLKPVTLELGGKSPFIV 314
>At1g54100.2 68414.m06167 aldehyde dehydrogenase, putative /
antiquitin, putative strong similarity to SP|Q41247
Aldehyde dehydrogenase family 7 member A1 (EC 1.2.1.3)
(Antiquitin 1) (Brassica
turgor-responsive/drought-induced gene 26 protein)
(Btg-26) {Brassica napus}; similar to turgor-responsive
protein 26G (aldehyde dehydrogenase family 7 member A1)
[Pisum sativum] SWISS-PROT:P25795
Length = 508
Score = 44.4 bits (100), Expect = 8e-05
Identities = 26/66 (39%), Positives = 39/66 (59%)
Frame = +3
Query: 510 KLALDGRAVKVPGFEKGNFVGPTIITDVTPSMECYKEEIFGPVLVCLFVETLDEAIQMIN 689
K+ G+AV+ +GNFV PTII +++ KEE+F PVL L ++ EA+ + N
Sbjct: 364 KILTGGKAVE----GEGNFVEPTII-EISADAAVVKEELFAPVLYVLKFKSFGEAVAINN 418
Query: 690 SNPYGM 707
S P G+
Sbjct: 419 SVPQGL 424
>At1g54100.1 68414.m06166 aldehyde dehydrogenase, putative /
antiquitin, putative strong similarity to SP|Q41247
Aldehyde dehydrogenase family 7 member A1 (EC 1.2.1.3)
(Antiquitin 1) (Brassica
turgor-responsive/drought-induced gene 26 protein)
(Btg-26) {Brassica napus}; similar to turgor-responsive
protein 26G (aldehyde dehydrogenase family 7 member A1)
[Pisum sativum] SWISS-PROT:P25795
Length = 508
Score = 44.4 bits (100), Expect = 8e-05
Identities = 26/66 (39%), Positives = 39/66 (59%)
Frame = +3
Query: 510 KLALDGRAVKVPGFEKGNFVGPTIITDVTPSMECYKEEIFGPVLVCLFVETLDEAIQMIN 689
K+ G+AV+ +GNFV PTII +++ KEE+F PVL L ++ EA+ + N
Sbjct: 364 KILTGGKAVE----GEGNFVEPTII-EISADAAVVKEELFAPVLYVLKFKSFGEAVAINN 418
Query: 690 SNPYGM 707
S P G+
Sbjct: 419 SVPQGL 424
>At4g34240.1 68417.m04867 aldehyde dehydrogenase (ALDH3) similar to
aldehyde dehydrogenase [Arabidopsis thaliana]
gi|17065876|emb|CAC84903; contains Pfam profile PF00171:
aldehyde dehydrogenase (NAD) family protein; identical
to cDNA aldehyde dehydrogenase (ALDH3 gene) GI:17065875,
aldehyde dehydrogenase [Arabidopsis thaliana]
GI:17065876
Length = 550
Score = 41.9 bits (94), Expect = 4e-04
Identities = 17/44 (38%), Positives = 28/44 (63%)
Frame = +3
Query: 567 VGPTIITDVTPSMECYKEEIFGPVLVCLFVETLDEAIQMINSNP 698
+ PTI+ DV + +EEIFGP+L + V+ +++ Q+I S P
Sbjct: 392 ISPTILLDVPEASSMMQEEIFGPLLPIITVQKIEDGFQVIRSKP 435
>At2g24270.2 68415.m02900 NADP-dependent glyceraldehyde-3-phosphate
dehydrogenase, putative similar to NADP-dependent
glyceraldehyde-3-phosphate dehydrogenase
(NON-phosphorylating glyceraldehyde 3-phosphate;
glyceraldehyde-3-phosphate dehydrogenase [NADP+])
[Nicotiana plumbaginifolia] SWISS-PROT:P93338
Length = 496
Score = 41.9 bits (94), Expect = 4e-04
Identities = 17/52 (32%), Positives = 32/52 (61%)
Frame = +3
Query: 555 KGNFVGPTIITDVTPSMECYKEEIFGPVLVCLFVETLDEAIQMINSNPYGME 710
+GN + P ++ +V P M EE FGPV+ L + +++E I N++ +G++
Sbjct: 369 EGNLIWPLLLDNVRPDMRIAWEEPFGPVVPVLRINSVEEGINHCNASNFGLQ 420
Score = 33.1 bits (72), Expect = 0.19
Identities = 21/76 (27%), Positives = 37/76 (48%), Gaps = 1/76 (1%)
Frame = +2
Query: 29 LMMMELLQEAGAPPGVVNIIHGTHGAV-NFICDQPEIKAVSFVGGDAAGKHIYTRASAAG 205
L M+ AG P G+++ I G + +F+ P + +SF GGD G I +A
Sbjct: 202 LHMVHCFHLAGFPKGLISCITGKGSEIGDFLTMHPAVNCISFTGGD-TGISISKKAGMI- 259
Query: 206 KRVQSNMGAKNHGVIM 253
+Q +G K+ +++
Sbjct: 260 -PLQMELGGKDACIVL 274
>At2g24270.1 68415.m02899 NADP-dependent glyceraldehyde-3-phosphate
dehydrogenase, putative similar to NADP-dependent
glyceraldehyde-3-phosphate dehydrogenase
(NON-phosphorylating glyceraldehyde 3-phosphate;
glyceraldehyde-3-phosphate dehydrogenase [NADP+])
[Nicotiana plumbaginifolia] SWISS-PROT:P93338
Length = 496
Score = 41.9 bits (94), Expect = 4e-04
Identities = 17/52 (32%), Positives = 32/52 (61%)
Frame = +3
Query: 555 KGNFVGPTIITDVTPSMECYKEEIFGPVLVCLFVETLDEAIQMINSNPYGME 710
+GN + P ++ +V P M EE FGPV+ L + +++E I N++ +G++
Sbjct: 369 EGNLIWPLLLDNVRPDMRIAWEEPFGPVVPVLRINSVEEGINHCNASNFGLQ 420
Score = 33.1 bits (72), Expect = 0.19
Identities = 21/76 (27%), Positives = 37/76 (48%), Gaps = 1/76 (1%)
Frame = +2
Query: 29 LMMMELLQEAGAPPGVVNIIHGTHGAV-NFICDQPEIKAVSFVGGDAAGKHIYTRASAAG 205
L M+ AG P G+++ I G + +F+ P + +SF GGD G I +A
Sbjct: 202 LHMVHCFHLAGFPKGLISCITGKGSEIGDFLTMHPAVNCISFTGGD-TGISISKKAGMI- 259
Query: 206 KRVQSNMGAKNHGVIM 253
+Q +G K+ +++
Sbjct: 260 -PLQMELGGKDACIVL 274
>At4g36250.1 68417.m05156 aldehyde dehydrogenase family protein
contais aldehyde dehydrogenase (NADP) family protein
domain, Pfam:PF00171
Length = 484
Score = 41.5 bits (93), Expect = 5e-04
Identities = 19/45 (42%), Positives = 27/45 (60%)
Frame = +3
Query: 564 FVGPTIITDVTPSMECYKEEIFGPVLVCLFVETLDEAIQMINSNP 698
+V PTI+ D E EEIFGP+L + V + E+I +IN+ P
Sbjct: 327 YVEPTILLDPPLDSEIMNEEIFGPILPIITVRDIQESIGIINTKP 371
>At1g44170.2 68414.m05102 aldehyde dehydrogenase, putative (ALDH)
similar to aldehyde dehydrogenase ALDH [Craterostigma
plantagineum] gi|17065918|emb|CAC84900
Length = 484
Score = 38.7 bits (86), Expect = 0.004
Identities = 18/44 (40%), Positives = 25/44 (56%)
Frame = +3
Query: 567 VGPTIITDVTPSMECYKEEIFGPVLVCLFVETLDEAIQMINSNP 698
+ PTI+ DV EEIFGP+L L + L+E+ +I S P
Sbjct: 329 IAPTILLDVPLDSLIMSEEIFGPLLPILTLNNLEESFDVIRSRP 372
>At1g44170.1 68414.m05101 aldehyde dehydrogenase, putative (ALDH)
similar to aldehyde dehydrogenase ALDH [Craterostigma
plantagineum] gi|17065918|emb|CAC84900
Length = 484
Score = 38.7 bits (86), Expect = 0.004
Identities = 18/44 (40%), Positives = 25/44 (56%)
Frame = +3
Query: 567 VGPTIITDVTPSMECYKEEIFGPVLVCLFVETLDEAIQMINSNP 698
+ PTI+ DV EEIFGP+L L + L+E+ +I S P
Sbjct: 329 IAPTILLDVPLDSLIMSEEIFGPLLPILTLNNLEESFDVIRSRP 372
>At3g66658.2 68416.m00781 betaine-aldehyde dehydrogenase, putative
similar to betaine-aldehyde dehydrogenase, chloroplast
precursor (BADH) [Spinacia oleracea] SWISS-PROT:P17202;
contains non-consensus splice site (GC) at intron 13
Length = 596
Score = 38.3 bits (85), Expect = 0.005
Identities = 15/45 (33%), Positives = 28/45 (62%)
Frame = +3
Query: 573 PTIITDVTPSMECYKEEIFGPVLVCLFVETLDEAIQMINSNPYGM 707
PT++ +V +M+ KEE FGP++ + T +E I++ N + Y +
Sbjct: 417 PTVLINVNHNMKIMKEEAFGPIMPIMQFSTDEEVIKLANDSRYAL 461
>At3g66658.1 68416.m00782 betaine-aldehyde dehydrogenase, putative
similar to betaine-aldehyde dehydrogenase, chloroplast
precursor (BADH) [Spinacia oleracea] SWISS-PROT:P17202;
contains non-consensus splice site (GC) at intron 13
Length = 554
Score = 38.3 bits (85), Expect = 0.005
Identities = 15/45 (33%), Positives = 28/45 (62%)
Frame = +3
Query: 573 PTIITDVTPSMECYKEEIFGPVLVCLFVETLDEAIQMINSNPYGM 707
PT++ +V +M+ KEE FGP++ + T +E I++ N + Y +
Sbjct: 417 PTVLINVNHNMKIMKEEAFGPIMPIMQFSTDEEVIKLANDSRYAL 461
>At4g34320.1 68417.m04878 expressed protein similar to At14a,
GI:11994571 and GI:11994573 [Arabidopsis thaliana]
Length = 374
Score = 31.1 bits (67), Expect = 0.75
Identities = 20/56 (35%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Frame = +1
Query: 325 MALSTAVFVGSAKEWIPDLVKR-EQALKVNAGHVPGTDVGPVISVAAKDRILRLVE 489
+A +TAV +GS +WI L K E ALK + G ++V D I L+E
Sbjct: 243 LAAATAVPLGSMGKWIDSLWKNYENALKGQKEVISSMQAGTFVAVKDLDNIRVLIE 298
>At3g53390.1 68416.m05892 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to Dystrophia myotonica-containing WD repeat
motif protein DMR-N9 protein (DMWD) (DM9) (SP:Q08274)
[Mus musculus]; simlar to DMR protein GI:18028289 [Homo
sapiens];
Length = 558
Score = 28.7 bits (61), Expect = 4.0
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = +2
Query: 137 KAVSFVGGDAAGKHIYTRASAAGKRVQSN 223
+A+SFVGG+ GK + T + +G SN
Sbjct: 104 RALSFVGGNGGGKSVSTSSRISGSFAASN 132
>At3g46050.1 68416.m04983 kelch repeat-containing F-box family
protein contains F-box domain Pfam:PF00646 and Kelch
motif Pfam:PF01344
Length = 370
Score = 28.3 bits (60), Expect = 5.3
Identities = 14/37 (37%), Positives = 20/37 (54%), Gaps = 3/37 (8%)
Frame = -1
Query: 115 EVHRTVCPVNDIN---NARRSPGFLKELHHHERGSRI 14
E R CPV+ + N SPG+L + H +RG R+
Sbjct: 258 EEDRGWCPVDGLEGLPNRPTSPGYLTSVAHSDRGRRV 294
>At1g56080.1 68414.m06439 expressed protein
Length = 310
Score = 28.3 bits (60), Expect = 5.3
Identities = 14/27 (51%), Positives = 19/27 (70%)
Frame = -3
Query: 533 RATVESQFTPSFTPDSTSLKILSLAAT 453
R ++ QF+P+FTP T KILS AA+
Sbjct: 165 RQSMTPQFSPAFTPSGTP-KILSTAAS 190
>At3g19080.1 68416.m02423 SWIB complex BAF60b domain-containing
protein contains Pfam profile PF02201: BAF60b domain of
the SWIB complex
Length = 462
Score = 27.9 bits (59), Expect = 7.0
Identities = 15/31 (48%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
Frame = +1
Query: 616 KRKYSGRFSSVCSLRPSTKRFR*STQ-TRTE 705
KRK G F+ VCSL P + F T+ RTE
Sbjct: 257 KRKGGGGFAKVCSLSPELQAFTGVTELARTE 287
>At1g48840.1 68414.m05468 expressed protein contains Pfam profile:
PF04842 plant protein of unknown function (DUF639)
Length = 691
Score = 27.9 bits (59), Expect = 7.0
Identities = 23/84 (27%), Positives = 34/84 (40%), Gaps = 3/84 (3%)
Frame = +3
Query: 462 QGQNLKACGVRCKGRRKLALDGRAVKVPGFEK---GNFVGPTIITDVTPSMECYKEEIFG 632
Q ++ GVR KG + L LDG P E + G I+TD + E K F
Sbjct: 206 QSESSLLSGVRSKGEKILELDGTVTTQPVLEHIGISTWPGRLILTDHSLYFEAIKVVSFD 265
Query: 633 PVLVCLFVETLDEAIQMINSNPYG 704
+ L + I+ + P+G
Sbjct: 266 TPKRYSLSDDLKQVIKPELTGPWG 289
>At4g03630.1 68417.m00498 root nodule development protein-related
similar to N7 protein [Medicago truncatula]
gi|3273101|emb|CAA76808; contains similarity to SKP1
interacting partner 1 GI:10716947 from [Arabidopsis
thaliana], PMID:11387208
Length = 220
Score = 27.5 bits (58), Expect = 9.3
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = +3
Query: 462 QGQNLKACGVRCKGRRKLALDGRAVKVPGF 551
+G+NL+A G C + L L+ + K PGF
Sbjct: 101 KGKNLEAIGFACLHLKTLKLNCQGFKFPGF 130
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,613,108
Number of Sequences: 28952
Number of extensions: 280911
Number of successful extensions: 894
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 844
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 890
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1535986264
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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