Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0032
         (522 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY752905-1|AAV30079.1|  100|Anopheles gambiae peroxidase 11 prot...    27   0.50 
AY334004-1|AAR01129.1|  194|Anopheles gambiae integrin protein.        25   1.2  
AY334003-1|AAR01128.1|  194|Anopheles gambiae integrin protein.        25   1.2  
AY334002-1|AAR01127.1|  194|Anopheles gambiae integrin protein.        25   1.2  
AY334001-1|AAR01126.1|  194|Anopheles gambiae integrin protein.        25   1.2  
AF492464-1|AAM11657.1|  803|Anopheles gambiae beta nu integrin s...    25   1.2  
AJ439060-16|CAD27767.1|  278|Anopheles gambiae hypothetical prot...    25   1.5  
AY081778-1|AAL91655.1|  507|Anopheles gambiae cytochrome P450 pr...    24   2.7  
AF487537-1|AAL93298.1|  507|Anopheles gambiae cytochrome P450 CY...    24   3.6  
AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodi...    23   4.7  
AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.            23   4.7  
AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.    23   6.2  

>AY752905-1|AAV30079.1|  100|Anopheles gambiae peroxidase 11
           protein.
          Length = 100

 Score = 26.6 bits (56), Expect = 0.50
 Identities = 12/35 (34%), Positives = 20/35 (57%)
 Frame = -1

Query: 210 TYNLNFIVFANRHGFYIEFLS*FLRQGRGHQHSPY 106
           T+ L  ++FA R+ F  +  S  +++GR H   PY
Sbjct: 27  TFGLTRLLFAGRNPFGSDLASLNIQRGRDHALRPY 61


>AY334004-1|AAR01129.1|  194|Anopheles gambiae integrin protein.
          Length = 194

 Score = 25.4 bits (53), Expect = 1.2
 Identities = 16/41 (39%), Positives = 18/41 (43%), Gaps = 1/41 (2%)
 Frame = -2

Query: 482 CLRGLHGCG-SFLGVFTLVFAKCSQSALCSAIEDCFAVFIH 363
           C  G   C  SF G F        Q ALCS+ EDC    +H
Sbjct: 42  CNCGRCSCDESFFGPFCET-KDGEQPALCSSYEDCIRCAVH 81


>AY334003-1|AAR01128.1|  194|Anopheles gambiae integrin protein.
          Length = 194

 Score = 25.4 bits (53), Expect = 1.2
 Identities = 16/41 (39%), Positives = 18/41 (43%), Gaps = 1/41 (2%)
 Frame = -2

Query: 482 CLRGLHGCG-SFLGVFTLVFAKCSQSALCSAIEDCFAVFIH 363
           C  G   C  SF G F        Q ALCS+ EDC    +H
Sbjct: 42  CNCGRCSCDESFFGPFCET-KDGEQPALCSSYEDCIRCAVH 81


>AY334002-1|AAR01127.1|  194|Anopheles gambiae integrin protein.
          Length = 194

 Score = 25.4 bits (53), Expect = 1.2
 Identities = 16/41 (39%), Positives = 18/41 (43%), Gaps = 1/41 (2%)
 Frame = -2

Query: 482 CLRGLHGCG-SFLGVFTLVFAKCSQSALCSAIEDCFAVFIH 363
           C  G   C  SF G F        Q ALCS+ EDC    +H
Sbjct: 42  CNCGRCSCDESFFGPFCET-KDGEQPALCSSYEDCIRCAVH 81


>AY334001-1|AAR01126.1|  194|Anopheles gambiae integrin protein.
          Length = 194

 Score = 25.4 bits (53), Expect = 1.2
 Identities = 16/41 (39%), Positives = 18/41 (43%), Gaps = 1/41 (2%)
 Frame = -2

Query: 482 CLRGLHGCG-SFLGVFTLVFAKCSQSALCSAIEDCFAVFIH 363
           C  G   C  SF G F        Q ALCS+ EDC    +H
Sbjct: 42  CNCGRCSCDESFFGPFCET-KDGEQPALCSSYEDCIRCAVH 81


>AF492464-1|AAM11657.1|  803|Anopheles gambiae beta nu integrin
           subunit AgBnu protein.
          Length = 803

 Score = 25.4 bits (53), Expect = 1.2
 Identities = 16/41 (39%), Positives = 18/41 (43%), Gaps = 1/41 (2%)
 Frame = -2

Query: 482 CLRGLHGCG-SFLGVFTLVFAKCSQSALCSAIEDCFAVFIH 363
           C  G   C  SF G F        Q ALCS+ EDC    +H
Sbjct: 618 CNCGRCSCDESFFGPFCET-KDGEQPALCSSYEDCIRCAVH 657


>AJ439060-16|CAD27767.1|  278|Anopheles gambiae hypothetical protein
           protein.
          Length = 278

 Score = 25.0 bits (52), Expect = 1.5
 Identities = 11/26 (42%), Positives = 14/26 (53%)
 Frame = -1

Query: 135 QGRGHQHSPYM*RSTEMPLPVFPS*G 58
           Q  GH HS    +S  +P+PVF   G
Sbjct: 150 QAAGHLHSSVSEKSKTVPVPVFQKVG 175


>AY081778-1|AAL91655.1|  507|Anopheles gambiae cytochrome P450
           protein.
          Length = 507

 Score = 24.2 bits (50), Expect = 2.7
 Identities = 10/19 (52%), Positives = 12/19 (63%)
 Frame = -2

Query: 164 TLNFCLSSLDRGEDINTRL 108
           T+NFCL  L +  DI  RL
Sbjct: 319 TMNFCLYELAKNPDIQGRL 337


>AF487537-1|AAL93298.1|  507|Anopheles gambiae cytochrome P450
           CYP6P2 protein.
          Length = 507

 Score = 23.8 bits (49), Expect = 3.6
 Identities = 10/19 (52%), Positives = 12/19 (63%)
 Frame = -2

Query: 164 TLNFCLSSLDRGEDINTRL 108
           T+NFCL  L +  DI  RL
Sbjct: 320 TMNFCLYELAKHPDIQERL 338


>AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodium
            channel alpha subunitprotein.
          Length = 2139

 Score = 23.4 bits (48), Expect = 4.7
 Identities = 12/39 (30%), Positives = 22/39 (56%), Gaps = 3/39 (7%)
 Frame = -1

Query: 285  SSQCIQQTFYVHLHHFA---NLLAFVVSTYNLNFIVFAN 178
            SS+C+ + F +  H+F    NL  FVV   ++  +V ++
Sbjct: 1667 SSECLMKIFALRYHYFIEPWNLFDFVVVILSILGLVLSD 1705


>AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.
          Length = 1356

 Score = 23.4 bits (48), Expect = 4.7
 Identities = 7/18 (38%), Positives = 11/18 (61%)
 Frame = +2

Query: 308 CNSICRHSPFKVCDCQVE 361
           C ++C    F  CDC++E
Sbjct: 740 CFALCHCCDFYACDCKME 757


>AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.
          Length = 1187

 Score = 23.0 bits (47), Expect = 6.2
 Identities = 15/69 (21%), Positives = 36/69 (52%)
 Frame = +1

Query: 136  SKELRQKFNVKSMPIRKDDEVQVVRGHYKGQQVGKVMQVYVKSLLYTLRGFKEKRPMVQQ 315
            SKEL+ K++ +   ++++DE++ +    K  ++ KV     K     + G ++K P + +
Sbjct: 884  SKELKAKYHQRDKLLKQNDELK-LEIKKKENEITKVRNEN-KDGYDRISGMEQKYPWIPE 941

Query: 316  HMSAFTLQS 342
                F +++
Sbjct: 942  DKEFFGVKN 950


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 538,718
Number of Sequences: 2352
Number of extensions: 12128
Number of successful extensions: 33
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 47783067
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)