Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--0032
(522 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z68315-10|CAD59149.1| 109|Caenorhabditis elegans Hypothetical p... 86 2e-17
Z68315-9|CAA92678.1| 106|Caenorhabditis elegans Hypothetical pr... 86 2e-17
Z68315-8|CAA92674.1| 142|Caenorhabditis elegans Hypothetical pr... 86 2e-17
Z92817-3|CAJ43914.1| 511|Caenorhabditis elegans Hypothetical pr... 28 3.5
Z92817-2|CAJ43913.1| 510|Caenorhabditis elegans Hypothetical pr... 28 3.5
Z50741-2|CAA90610.1| 383|Caenorhabditis elegans Hypothetical pr... 28 4.7
AL031637-1|CAA21047.2| 317|Caenorhabditis elegans Hypothetical ... 28 4.7
U23513-3|AAB36862.1| 209|Caenorhabditis elegans Hypothetical pr... 27 8.1
>Z68315-10|CAD59149.1| 109|Caenorhabditis elegans Hypothetical
protein F28C6.7c protein.
Length = 109
Score = 85.8 bits (203), Expect = 2e-17
Identities = 41/79 (51%), Positives = 57/79 (72%)
Frame = +1
Query: 34 MKFNKQVTSSRRKNRKRHFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRG 213
MK N V+S K+RK HF+APSH RR +MS+PL+KELR K ++++PIR DDEV V+RG
Sbjct: 1 MKVNPFVSSDSGKSRKAHFNAPSHERRRIMSAPLTKELRTKHGIRAIPIRTDDEVVVMRG 60
Query: 214 HYKGQQVGKVMQVYVKSLL 270
+KG G+V++ Y K +
Sbjct: 61 RHKG-NTGRVLRCYRKKFV 78
Score = 51.2 bits (117), Expect = 4e-07
Identities = 20/29 (68%), Positives = 27/29 (93%)
Frame = +3
Query: 255 RKKFVVYIERIQREKANGATAYVGIHPSK 341
RKKFV++I++I REKANG+T ++GIHPSK
Sbjct: 74 RKKFVIHIDKITREKANGSTVHIGIHPSK 102
>Z68315-9|CAA92678.1| 106|Caenorhabditis elegans Hypothetical
protein F28C6.7b protein.
Length = 106
Score = 85.8 bits (203), Expect = 2e-17
Identities = 41/79 (51%), Positives = 57/79 (72%)
Frame = +1
Query: 34 MKFNKQVTSSRRKNRKRHFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRG 213
MK N V+S K+RK HF+APSH RR +MS+PL+KELR K ++++PIR DDEV V+RG
Sbjct: 1 MKVNPFVSSDSGKSRKAHFNAPSHERRRIMSAPLTKELRTKHGIRAIPIRTDDEVVVMRG 60
Query: 214 HYKGQQVGKVMQVYVKSLL 270
+KG G+V++ Y K +
Sbjct: 61 RHKG-NTGRVLRCYRKKFV 78
Score = 51.2 bits (117), Expect = 4e-07
Identities = 20/29 (68%), Positives = 27/29 (93%)
Frame = +3
Query: 255 RKKFVVYIERIQREKANGATAYVGIHPSK 341
RKKFV++I++I REKANG+T ++GIHPSK
Sbjct: 74 RKKFVIHIDKITREKANGSTVHIGIHPSK 102
>Z68315-8|CAA92674.1| 142|Caenorhabditis elegans Hypothetical
protein F28C6.7a protein.
Length = 142
Score = 85.8 bits (203), Expect = 2e-17
Identities = 41/79 (51%), Positives = 57/79 (72%)
Frame = +1
Query: 34 MKFNKQVTSSRRKNRKRHFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRG 213
MK N V+S K+RK HF+APSH RR +MS+PL+KELR K ++++PIR DDEV V+RG
Sbjct: 1 MKVNPFVSSDSGKSRKAHFNAPSHERRRIMSAPLTKELRTKHGIRAIPIRTDDEVVVMRG 60
Query: 214 HYKGQQVGKVMQVYVKSLL 270
+KG G+V++ Y K +
Sbjct: 61 RHKG-NTGRVLRCYRKKFV 78
Score = 83.8 bits (198), Expect = 7e-17
Identities = 36/63 (57%), Positives = 51/63 (80%)
Frame = +3
Query: 255 RKKFVVYIERIQREKANGATAYVGIHPSKCVIVKLKMNKDRKAILDRRAKGRLAALGKDK 434
RKKFV++I++I REKANG+T ++GIHPSK I KLK++KDR+A+++R+A GR G K
Sbjct: 74 RKKFVIHIDKITREKANGSTVHIGIHPSKVAITKLKLDKDRRALVERKAAGRSRVTGILK 133
Query: 435 GKY 443
GK+
Sbjct: 134 GKH 136
>Z92817-3|CAJ43914.1| 511|Caenorhabditis elegans Hypothetical
protein W08G11.3b protein.
Length = 511
Score = 28.3 bits (60), Expect = 3.5
Identities = 28/107 (26%), Positives = 51/107 (47%), Gaps = 5/107 (4%)
Frame = +1
Query: 31 RMKFNKQVTSSRRKNRKRHFSAPSHIRRVLMSSPLSKELRQ-----KFNVKSMPIRKDDE 195
R KF + + +K A + I+R+L S++L K N++ IRK+DE
Sbjct: 219 RQKFVQGAQLNVKKAEADLQLANAEIQRLLRELDSSQQLENSSITDKRNIEEELIRKEDE 278
Query: 196 VQVVRGHYKGQQVGKVMQVYVKSLLYTLRGFKEKRPMVQQHMSAFTL 336
+++ +YK + K ++ L LR K+++P V M+ T+
Sbjct: 279 IRL--ANYKSATLLKAANDKIEKL--ELR-LKQEKPAVHNEMTVETI 320
>Z92817-2|CAJ43913.1| 510|Caenorhabditis elegans Hypothetical
protein W08G11.3a protein.
Length = 510
Score = 28.3 bits (60), Expect = 3.5
Identities = 28/107 (26%), Positives = 51/107 (47%), Gaps = 5/107 (4%)
Frame = +1
Query: 31 RMKFNKQVTSSRRKNRKRHFSAPSHIRRVLMSSPLSKELRQ-----KFNVKSMPIRKDDE 195
R KF + + +K A + I+R+L S++L K N++ IRK+DE
Sbjct: 218 RQKFVQGAQLNVKKAEADLQLANAEIQRLLRELDSSQQLENSSITDKRNIEEELIRKEDE 277
Query: 196 VQVVRGHYKGQQVGKVMQVYVKSLLYTLRGFKEKRPMVQQHMSAFTL 336
+++ +YK + K ++ L LR K+++P V M+ T+
Sbjct: 278 IRL--ANYKSATLLKAANDKIEKL--ELR-LKQEKPAVHNEMTVETI 319
>Z50741-2|CAA90610.1| 383|Caenorhabditis elegans Hypothetical
protein F55G7.2 protein.
Length = 383
Score = 27.9 bits (59), Expect = 4.7
Identities = 21/85 (24%), Positives = 39/85 (45%), Gaps = 3/85 (3%)
Frame = +1
Query: 37 KFNKQVTSSRRKNRKRHFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRGH 216
KFN+ V RR N K+ P H + + +++++ + S+P K + H
Sbjct: 94 KFNEAVALFRRDNPKKQLLLPKHWDQSTCTQQVAQKITEIAKDLSVPYPKK-----LNQH 148
Query: 217 YKG---QQVGKVMQVYVKSLLYTLR 282
YKG + G+ M + S++ L+
Sbjct: 149 YKGFSSETYGETMLEQIGSIVDELK 173
>AL031637-1|CAA21047.2| 317|Caenorhabditis elegans Hypothetical
protein Y47H9B.2 protein.
Length = 317
Score = 27.9 bits (59), Expect = 4.7
Identities = 7/24 (29%), Positives = 15/24 (62%)
Frame = -1
Query: 477 KRPPWLWQFPRCIYPCLCQVQPVC 406
++ PW ++ +YP LC++ +C
Sbjct: 249 RKYPWYYKMSSAMYPALCELAGIC 272
>U23513-3|AAB36862.1| 209|Caenorhabditis elegans Hypothetical
protein D2021.8 protein.
Length = 209
Score = 27.1 bits (57), Expect = 8.1
Identities = 15/37 (40%), Positives = 25/37 (67%), Gaps = 2/37 (5%)
Frame = -1
Query: 234 NLL--AFVVSTYNLNFIVFANRHGFYIEFLS*FLRQG 130
NLL A VV ++NL+ ++ A +HG ++E + L+QG
Sbjct: 11 NLLKPAVVVDSFNLHAVISATQHG-HVESVEAALKQG 46
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,780,918
Number of Sequences: 27780
Number of extensions: 261712
Number of successful extensions: 733
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 697
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 733
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1017709248
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -