Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0030
         (456 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4 prot...    26   0.19 
DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8 prot...    21   4.1  
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     21   5.5  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    21   5.5  
AJ850297-1|CAH64517.1|  539|Tribolium castaneum putative esteras...    21   5.5  
AJ850295-1|CAH64515.1|  539|Tribolium castaneum putative esteras...    21   5.5  
AJ850294-1|CAH64514.1|  539|Tribolium castaneum putative esteras...    21   5.5  
AJ850293-1|CAH64513.1|  539|Tribolium castaneum putative esteras...    21   5.5  
AJ850292-1|CAH64512.1|  539|Tribolium castaneum putative esteras...    21   5.5  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      21   7.2  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      21   7.2  
AJ829922-1|CAH25640.1|  193|Tribolium castaneum twist bHLH trans...    21   7.2  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    20   9.5  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    20   9.5  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    20   9.5  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    20   9.5  

>EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4
           protein.
          Length = 475

 Score = 25.8 bits (54), Expect = 0.19
 Identities = 9/28 (32%), Positives = 15/28 (53%)
 Frame = +3

Query: 261 NAFRFEGWGSRCNYTEILELISRGAWRI 344
           N+ ++ G      Y EI+EL   G W++
Sbjct: 286 NSGKYTGEAGMLGYNEIVELQKEGGWKV 313


>DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8
           protein.
          Length = 496

 Score = 21.4 bits (43), Expect = 4.1
 Identities = 9/26 (34%), Positives = 13/26 (50%)
 Frame = +3

Query: 261 NAFRFEGWGSRCNYTEILELISRGAW 338
           +A R+ G      Y EI+E  + G W
Sbjct: 290 DAGRYTGERGMMGYNEIVEAQNAGGW 315


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 21.0 bits (42), Expect = 5.5
 Identities = 11/35 (31%), Positives = 16/35 (45%)
 Frame = +3

Query: 228 HHPPPISAVSTNAFRFEGWGSRCNYTEILELISRG 332
           +HP  +   S      E  GS  N +EIL++   G
Sbjct: 531 NHPFHLHGHSFRVVAMERVGSHVNVSEILKMDQNG 565


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.0 bits (42), Expect = 5.5
 Identities = 8/27 (29%), Positives = 17/27 (62%)
 Frame = -3

Query: 445 KRLFYFYFIA*MDDELTAHLVLSGYWS 365
           +R++YFY ++   +     L+ SGY++
Sbjct: 54  RRIYYFYCVSITFNVHLLFLLCSGYFT 80


>AJ850297-1|CAH64517.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 21.0 bits (42), Expect = 5.5
 Identities = 7/15 (46%), Positives = 8/15 (53%)
 Frame = -3

Query: 262 LVLTAEIGGGWWYLP 218
           + LT      WWYLP
Sbjct: 266 IALTVPRYQAWWYLP 280


>AJ850295-1|CAH64515.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 21.0 bits (42), Expect = 5.5
 Identities = 7/15 (46%), Positives = 8/15 (53%)
 Frame = -3

Query: 262 LVLTAEIGGGWWYLP 218
           + LT      WWYLP
Sbjct: 266 IALTVPRYQAWWYLP 280


>AJ850294-1|CAH64514.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 21.0 bits (42), Expect = 5.5
 Identities = 7/15 (46%), Positives = 8/15 (53%)
 Frame = -3

Query: 262 LVLTAEIGGGWWYLP 218
           + LT      WWYLP
Sbjct: 266 IALTVPRYQAWWYLP 280


>AJ850293-1|CAH64513.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 21.0 bits (42), Expect = 5.5
 Identities = 7/15 (46%), Positives = 8/15 (53%)
 Frame = -3

Query: 262 LVLTAEIGGGWWYLP 218
           + LT      WWYLP
Sbjct: 266 IALTVPRYQAWWYLP 280


>AJ850292-1|CAH64512.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 21.0 bits (42), Expect = 5.5
 Identities = 7/15 (46%), Positives = 8/15 (53%)
 Frame = -3

Query: 262 LVLTAEIGGGWWYLP 218
           + LT      WWYLP
Sbjct: 266 IALTVPRYQAWWYLP 280


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 20.6 bits (41), Expect = 7.2
 Identities = 7/12 (58%), Positives = 8/12 (66%)
 Frame = +3

Query: 228 HHPPPISAVSTN 263
           HH PP + V TN
Sbjct: 742 HHQPPRNPVGTN 753


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 20.6 bits (41), Expect = 7.2
 Identities = 7/12 (58%), Positives = 8/12 (66%)
 Frame = +3

Query: 228 HHPPPISAVSTN 263
           HH PP + V TN
Sbjct: 634 HHQPPRNPVGTN 645


>AJ829922-1|CAH25640.1|  193|Tribolium castaneum twist bHLH
           transcription factor protein.
          Length = 193

 Score = 20.6 bits (41), Expect = 7.2
 Identities = 8/15 (53%), Positives = 9/15 (60%)
 Frame = +2

Query: 212 PHG*VPPPPAYFRCE 256
           PH  VPPP  Y+  E
Sbjct: 16  PHQEVPPPFGYYHEE 30


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 20.2 bits (40), Expect = 9.5
 Identities = 6/15 (40%), Positives = 11/15 (73%)
 Frame = -2

Query: 98  VRISLEKLVPACGIR 54
           + +S+  L+ ACG+R
Sbjct: 416 IPVSISLLIAACGLR 430


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 20.2 bits (40), Expect = 9.5
 Identities = 6/15 (40%), Positives = 11/15 (73%)
 Frame = -2

Query: 98  VRISLEKLVPACGIR 54
           + +S+  L+ ACG+R
Sbjct: 416 IPVSISLLIAACGLR 430


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 20.2 bits (40), Expect = 9.5
 Identities = 6/15 (40%), Positives = 11/15 (73%)
 Frame = -2

Query: 98  VRISLEKLVPACGIR 54
           + +S+  L+ ACG+R
Sbjct: 416 IPVSISLLIAACGLR 430


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 20.2 bits (40), Expect = 9.5
 Identities = 6/15 (40%), Positives = 11/15 (73%)
 Frame = -2

Query: 98  VRISLEKLVPACGIR 54
           + +S+  L+ ACG+R
Sbjct: 416 IPVSISLLIAACGLR 430


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 119,877
Number of Sequences: 336
Number of extensions: 2585
Number of successful extensions: 16
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 10406187
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)