Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--0028
(400 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P42677 Cluster: 40S ribosomal protein S27; n=74; Bilate... 154 5e-37
UniRef50_Q71UM5 Cluster: 40S ribosomal protein S27-like protein;... 149 2e-35
UniRef50_UPI00015B4FAB Cluster: PREDICTED: similar to myotubular... 147 8e-35
UniRef50_Q7RVN2 Cluster: 40S ribosomal protein S27; n=17; Fungi/... 146 1e-34
UniRef50_UPI00005A14C9 Cluster: PREDICTED: similar to ribosomal ... 93 1e-18
UniRef50_Q7R0I3 Cluster: Ribosomal protein S27; n=1; Giardia lam... 93 2e-18
UniRef50_Q9AW40 Cluster: 40S ribosomal protein S27; n=1; Guillar... 87 2e-16
UniRef50_A2DGQ3 Cluster: Ribosomal protein S27, putative; n=4; T... 78 6e-14
UniRef50_Q3LW62 Cluster: Ribosomal protein S27; n=1; Bigelowiell... 76 3e-13
UniRef50_Q6QI38 Cluster: LRRGT00170; n=2; Rattus norvegicus|Rep:... 75 4e-13
UniRef50_Q5T4L4 Cluster: Ribosomal protein S27; n=30; Fungi/Meta... 73 2e-12
UniRef50_Q6QI46 Cluster: LRRGT00162; n=1; Rattus norvegicus|Rep:... 71 1e-11
UniRef50_Q8SS34 Cluster: 40S RIBOSOMAL PROTEIN S27; n=1; Encepha... 62 4e-09
UniRef50_Q22CK0 Cluster: Putative uncharacterized protein; n=1; ... 62 5e-09
UniRef50_Q8ZTY4 Cluster: 30S ribosomal protein S27e; n=10; Archa... 55 4e-07
UniRef50_Q9YF01 Cluster: 30S ribosomal protein S27e; n=4; Thermo... 53 2e-06
UniRef50_Q8TGN0 Cluster: Uncharacterized protein YKL156C-A; n=1;... 48 5e-05
UniRef50_A0RY94 Cluster: Ribosomal protein S27E; n=1; Cenarchaeu... 47 1e-04
UniRef50_Q9HRT7 Cluster: 30S ribosomal protein S27e; n=7; Euryar... 47 2e-04
UniRef50_UPI00006C13E4 Cluster: PREDICTED: similar to ribosomal ... 46 3e-04
UniRef50_Q8U474 Cluster: 30S ribosomal protein S27e; n=9; Euryar... 46 3e-04
UniRef50_Q8TY87 Cluster: 30S ribosomal protein S27e; n=13; Archa... 46 3e-04
UniRef50_A7DPS1 Cluster: Ribosomal protein S27E; n=1; Candidatus... 46 4e-04
UniRef50_Q6QI40 Cluster: LRRGT00168; n=1; Rattus norvegicus|Rep:... 45 5e-04
UniRef50_Q18KR1 Cluster: Ribosomal protein S27.eR; n=3; Halobact... 42 0.006
UniRef50_Q1PS48 Cluster: Cxpwmw06; n=1; Periplaneta americana|Re... 40 0.018
UniRef50_Q9HIX2 Cluster: 30S ribosomal protein S27e; n=4; Thermo... 39 0.031
UniRef50_A7PBG8 Cluster: Chromosome chr16 scaffold_10, whole gen... 34 0.89
UniRef50_Q7X8M6 Cluster: OJ000223_09.12 protein; n=3; Oryza sati... 31 6.3
UniRef50_Q7QFC6 Cluster: ENSANGP00000020801; n=2; Culicidae|Rep:... 31 8.3
>UniRef50_P42677 Cluster: 40S ribosomal protein S27; n=74;
Bilateria|Rep: 40S ribosomal protein S27 - Homo sapiens
(Human)
Length = 84
Score = 154 bits (374), Expect = 5e-37
Identities = 67/79 (84%), Positives = 71/79 (89%)
Frame = +3
Query: 18 MPLAIDLLHPSPASERRKHKLKRLVPHPNSYFMDVKCPGCYKITTVFSHAQRVVVCAGCS 197
MPLA DLLHPSP E+RKHK KRLV PNSYFMDVKCPGCYKITTVFSHAQ VV+C GCS
Sbjct: 1 MPLAKDLLHPSPEEEKRKHKKKRLVQSPNSYFMDVKCPGCYKITTVFSHAQTVVLCVGCS 60
Query: 198 TILCQPTGGRARLTEGCSF 254
T+LCQPTGG+ARLTEGCSF
Sbjct: 61 TVLCQPTGGKARLTEGCSF 79
>UniRef50_Q71UM5 Cluster: 40S ribosomal protein S27-like protein;
n=100; Eukaryota|Rep: 40S ribosomal protein S27-like
protein - Homo sapiens (Human)
Length = 84
Score = 149 bits (361), Expect = 2e-35
Identities = 65/79 (82%), Positives = 70/79 (88%)
Frame = +3
Query: 18 MPLAIDLLHPSPASERRKHKLKRLVPHPNSYFMDVKCPGCYKITTVFSHAQRVVVCAGCS 197
MPLA DLLHPS E++KHK KRLV PNSYFMDVKCPGCYKITTVFSHAQ VV+C GCS
Sbjct: 1 MPLARDLLHPSLEEEKKKHKKKRLVQSPNSYFMDVKCPGCYKITTVFSHAQTVVLCVGCS 60
Query: 198 TILCQPTGGRARLTEGCSF 254
T+LCQPTGG+ARLTEGCSF
Sbjct: 61 TVLCQPTGGKARLTEGCSF 79
>UniRef50_UPI00015B4FAB Cluster: PREDICTED: similar to myotubularin;
n=2; Apocrita|Rep: PREDICTED: similar to myotubularin -
Nasonia vitripennis
Length = 2064
Score = 147 bits (356), Expect = 8e-35
Identities = 65/86 (75%), Positives = 70/86 (81%)
Frame = +3
Query: 3 SARVTMPLAIDLLHPSPASERRKHKLKRLVPHPNSYFMDVKCPGCYKITTVFSHAQRVVV 182
S +MPLA D LHPSPA E+RKHKLKRLV PNSYFMDVKCPGCY I T+FSHAQR V
Sbjct: 1975 SGSKSMPLAKDFLHPSPAEEKRKHKLKRLVQKPNSYFMDVKCPGCYAIKTIFSHAQRPVE 2034
Query: 183 CAGCSTILCQPTGGRARLTEGCSFEE 260
C GC TILC PTGG+ARLTEGCSF +
Sbjct: 2035 CDGCRTILCTPTGGKARLTEGCSFRK 2060
>UniRef50_Q7RVN2 Cluster: 40S ribosomal protein S27; n=17;
Fungi/Metazoa group|Rep: 40S ribosomal protein S27 -
Neurospora crassa
Length = 82
Score = 146 bits (355), Expect = 1e-34
Identities = 63/79 (79%), Positives = 71/79 (89%)
Frame = +3
Query: 18 MPLAIDLLHPSPASERRKHKLKRLVPHPNSYFMDVKCPGCYKITTVFSHAQRVVVCAGCS 197
M LA+DLL+PSPASE RKHKLK LVP P S+FMDVKCPGC+ ITTVFSHAQ VV+C GC+
Sbjct: 1 MVLAVDLLNPSPASEARKHKLKTLVPAPRSFFMDVKCPGCFTITTVFSHAQTVVICQGCT 60
Query: 198 TILCQPTGGRARLTEGCSF 254
T+LCQPTGG+ARLTEGCSF
Sbjct: 61 TVLCQPTGGKARLTEGCSF 79
>UniRef50_UPI00005A14C9 Cluster: PREDICTED: similar to ribosomal
protein S27; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to ribosomal protein S27 - Canis familiaris
Length = 115
Score = 93.5 bits (222), Expect = 1e-18
Identities = 45/64 (70%), Positives = 50/64 (78%)
Frame = +3
Query: 18 MPLAIDLLHPSPASERRKHKLKRLVPHPNSYFMDVKCPGCYKITTVFSHAQRVVVCAGCS 197
MPL DLLHPSP ++RKHK K LV PNSYFMD+KCPGCYKITTVFSHAQ VV+ A
Sbjct: 1 MPLVKDLLHPSP-EKKRKHKKKHLVQSPNSYFMDMKCPGCYKITTVFSHAQTVVLKA--Q 57
Query: 198 TILC 209
T+ C
Sbjct: 58 TLRC 61
>UniRef50_Q7R0I3 Cluster: Ribosomal protein S27; n=1; Giardia
lamblia ATCC 50803|Rep: Ribosomal protein S27 - Giardia
lamblia ATCC 50803
Length = 81
Score = 93.1 bits (221), Expect = 2e-18
Identities = 38/70 (54%), Positives = 49/70 (70%)
Frame = +3
Query: 30 IDLLHPSPASERRKHKLKRLVPHPNSYFMDVKCPGCYKITTVFSHAQRVVVCAGCSTILC 209
+DLL+P P E+RKHKLKRLV PNSYF+++KC GC I V+SHA V C GC++ +
Sbjct: 3 VDLLYPDPVEEQRKHKLKRLVQGPNSYFLEIKCAGCQDIVVVYSHANTPVFCPGCTSQIS 62
Query: 210 QPTGGRARLT 239
PTGG+ T
Sbjct: 63 IPTGGKCAFT 72
>UniRef50_Q9AW40 Cluster: 40S ribosomal protein S27; n=1; Guillardia
theta|Rep: 40S ribosomal protein S27 - Guillardia theta
(Cryptomonas phi)
Length = 81
Score = 86.6 bits (205), Expect = 2e-16
Identities = 33/65 (50%), Positives = 46/65 (70%)
Frame = +3
Query: 60 ERRKHKLKRLVPHPNSYFMDVKCPGCYKITTVFSHAQRVVVCAGCSTILCQPTGGRARLT 239
E+ KHK KR++P+PNSYF+++ C C +FSH+Q +VC C+ LC PTGG+ARL
Sbjct: 14 EKMKHKKKRIIPNPNSYFINIICKNCKNKNIIFSHSQTKIVCKNCALNLCYPTGGKARLI 73
Query: 240 EGCSF 254
+GC F
Sbjct: 74 KGCKF 78
>UniRef50_A2DGQ3 Cluster: Ribosomal protein S27, putative; n=4;
Trichomonas vaginalis G3|Rep: Ribosomal protein S27,
putative - Trichomonas vaginalis G3
Length = 86
Score = 78.2 bits (184), Expect = 6e-14
Identities = 34/73 (46%), Positives = 44/73 (60%)
Frame = +3
Query: 24 LAIDLLHPSPASERRKHKLKRLVPHPNSYFMDVKCPGCYKITTVFSHAQRVVVCAGCSTI 203
L +D+LHPS E +K K LVP+P S F+ ++CP C +TT FSH+ V C C T
Sbjct: 4 LDVDILHPSVEQEAHTNKKKTLVPNPRSEFLSLRCPSCTGLTTAFSHSNVPVFCKNCQTP 63
Query: 204 LCQPTGGRARLTE 242
L PTGGR L +
Sbjct: 64 LATPTGGRILLAD 76
>UniRef50_Q3LW62 Cluster: Ribosomal protein S27; n=1; Bigelowiella
natans|Rep: Ribosomal protein S27 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 93
Score = 75.8 bits (178), Expect = 3e-13
Identities = 32/81 (39%), Positives = 51/81 (62%)
Frame = +3
Query: 30 IDLLHPSPASERRKHKLKRLVPHPNSYFMDVKCPGCYKITTVFSHAQRVVVCAGCSTILC 209
+DL +PS +E +KHKLKRL+ PNS+++ KC C KI +FSH+ C CST+L
Sbjct: 8 LDLSNPSKKTEAKKHKLKRLIQSPNSHYIATKCLKCKKINIIFSHSVFWKTCVDCSTLLT 67
Query: 210 QPTGGRARLTEGCSFEENNIN 272
+P+GG+ + ++ + +N
Sbjct: 68 RPSGGKFKSSKSMQIVKRLLN 88
>UniRef50_Q6QI38 Cluster: LRRGT00170; n=2; Rattus norvegicus|Rep:
LRRGT00170 - Rattus norvegicus (Rat)
Length = 496
Score = 75.4 bits (177), Expect = 4e-13
Identities = 32/53 (60%), Positives = 38/53 (71%)
Frame = +3
Query: 60 ERRKHKLKRLVPHPNSYFMDVKCPGCYKITTVFSHAQRVVVCAGCSTILCQPT 218
E+RKHK K LV P+SYFMDVK GCYK+ +FS VV+ GCST+ CQPT
Sbjct: 202 EKRKHKKKHLVQSPSSYFMDVKYLGCYKVPNIFSQEHTVVLYDGCSTVFCQPT 254
>UniRef50_Q5T4L4 Cluster: Ribosomal protein S27; n=30; Fungi/Metazoa
group|Rep: Ribosomal protein S27 - Homo sapiens (Human)
Length = 66
Score = 73.3 bits (172), Expect = 2e-12
Identities = 32/39 (82%), Positives = 33/39 (84%)
Frame = +3
Query: 18 MPLAIDLLHPSPASERRKHKLKRLVPHPNSYFMDVKCPG 134
MPLA DLLHPSP E+RKHK KRLV PNSYFMDVKCPG
Sbjct: 1 MPLAKDLLHPSPEEEKRKHKKKRLVQSPNSYFMDVKCPG 39
>UniRef50_Q6QI46 Cluster: LRRGT00162; n=1; Rattus norvegicus|Rep:
LRRGT00162 - Rattus norvegicus (Rat)
Length = 291
Score = 70.5 bits (165), Expect = 1e-11
Identities = 34/56 (60%), Positives = 40/56 (71%)
Frame = +3
Query: 15 TMPLAIDLLHPSPASERRKHKLKRLVPHPNSYFMDVKCPGCYKITTVFSHAQRVVV 182
TM L L + E+RKHK +RLV PNSYFMDV+CPG Y+ITTVFS AQ VV+
Sbjct: 166 TMKLRRVCLQTAAKEEQRKHKKRRLVQSPNSYFMDVQCPGRYEITTVFSRAQTVVL 221
>UniRef50_Q8SS34 Cluster: 40S RIBOSOMAL PROTEIN S27; n=1;
Encephalitozoon cuniculi|Rep: 40S RIBOSOMAL PROTEIN S27
- Encephalitozoon cuniculi
Length = 85
Score = 62.1 bits (144), Expect = 4e-09
Identities = 30/84 (35%), Positives = 44/84 (52%)
Frame = +3
Query: 24 LAIDLLHPSPASERRKHKLKRLVPHPNSYFMDVKCPGCYKITTVFSHAQRVVVCAGCSTI 203
+A DL P+ +K RL N +FM V+C GC T +SH+Q + C GC I
Sbjct: 1 MASDLAFPTREKVGSTYKKDRLYREGNGFFMYVRCGGCRHTTCCYSHSQTNISCPGCGDI 60
Query: 204 LCQPTGGRARLTEGCSFEENNINI 275
+ +GGRA ++ C F++ NI
Sbjct: 61 ILTSSGGRAVVSPNCEFKKIIRNI 84
>UniRef50_Q22CK0 Cluster: Putative uncharacterized protein; n=1;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 217
Score = 61.7 bits (143), Expect = 5e-09
Identities = 26/50 (52%), Positives = 35/50 (70%)
Frame = +3
Query: 33 DLLHPSPASERRKHKLKRLVPHPNSYFMDVKCPGCYKITTVFSHAQRVVV 182
DLL+P E++K+K KRL+ PNSYFMDVKC C I +FS+AQ ++
Sbjct: 4 DLLNPIYEEEKQKNKFKRLIQAPNSYFMDVKCAQCQNIQMIFSNAQSTII 53
Score = 37.9 bits (84), Expect = 0.072
Identities = 13/25 (52%), Positives = 19/25 (76%)
Frame = +3
Query: 192 CSTILCQPTGGRARLTEGCSFEENN 266
CS ILC+PTGG+ ++ GC+F+ N
Sbjct: 193 CSAILCKPTGGKVQIQAGCAFKIKN 217
>UniRef50_Q8ZTY4 Cluster: 30S ribosomal protein S27e; n=10;
Archaea|Rep: 30S ribosomal protein S27e - Pyrobaculum
aerophilum
Length = 67
Score = 55.2 bits (127), Expect = 4e-07
Identities = 24/52 (46%), Positives = 30/52 (57%)
Frame = +3
Query: 81 KRLVPHPNSYFMDVKCPGCYKITTVFSHAQRVVVCAGCSTILCQPTGGRARL 236
K L+P P S F+ +CP C FSHA VV C C +L PTGG+A+L
Sbjct: 7 KVLIPQPKSKFIKTRCPDCGNEQITFSHAAMVVRCLVCGRVLAIPTGGKAKL 58
>UniRef50_Q9YF01 Cluster: 30S ribosomal protein S27e; n=4;
Thermoprotei|Rep: 30S ribosomal protein S27e - Aeropyrum
pernix
Length = 73
Score = 53.2 bits (122), Expect = 2e-06
Identities = 23/52 (44%), Positives = 30/52 (57%)
Frame = +3
Query: 81 KRLVPHPNSYFMDVKCPGCYKITTVFSHAQRVVVCAGCSTILCQPTGGRARL 236
K L+P P S F+ V CP C VFSH+ C C +L +PTGG+AR+
Sbjct: 13 KVLIPRPRSRFLLVTCPKCGNRQVVFSHSTFRARCLNCGEVLVEPTGGKARI 64
>UniRef50_Q8TGN0 Cluster: Uncharacterized protein YKL156C-A; n=1;
Saccharomyces cerevisiae|Rep: Uncharacterized protein
YKL156C-A - Saccharomyces cerevisiae (Baker's yeast)
Length = 38
Score = 48.4 bits (110), Expect = 5e-05
Identities = 22/35 (62%), Positives = 26/35 (74%)
Frame = -1
Query: 136 QPGHLTSMK*ELGCGTSRLSLCFLLSDAGEGCNKS 32
QPGHLTS K +LG T+ +LCFL S+A GCNKS
Sbjct: 4 QPGHLTSRKYDLGPWTNVFNLCFLASEAAVGCNKS 38
>UniRef50_A0RY94 Cluster: Ribosomal protein S27E; n=1; Cenarchaeum
symbiosum|Rep: Ribosomal protein S27E - Cenarchaeum
symbiosum
Length = 224
Score = 47.2 bits (107), Expect = 1e-04
Identities = 20/49 (40%), Positives = 28/49 (57%)
Frame = +3
Query: 90 VPHPNSYFMDVKCPGCYKITTVFSHAQRVVVCAGCSTILCQPTGGRARL 236
VP P S F+ ++C C T V+S A+ V C C +L +P GG+A L
Sbjct: 8 VPEPTSRFVKIECESCGSPTIVYSMAKSAVNCRFCGNLLAEPAGGKAVL 56
>UniRef50_Q9HRT7 Cluster: 30S ribosomal protein S27e; n=7;
Euryarchaeota|Rep: 30S ribosomal protein S27e -
Halobacterium salinarium (Halobacterium halobium)
Length = 57
Score = 46.8 bits (106), Expect = 2e-04
Identities = 21/42 (50%), Positives = 24/42 (57%)
Frame = +3
Query: 111 FMDVKCPGCYKITTVFSHAQRVVVCAGCSTILCQPTGGRARL 236
F +V+CP C TVF A V CA C T L +PTGG A L
Sbjct: 5 FYNVECPDCENEQTVFGKASTEVACAVCGTTLARPTGGEADL 46
>UniRef50_UPI00006C13E4 Cluster: PREDICTED: similar to ribosomal
protein S27; n=1; Homo sapiens|Rep: PREDICTED: similar
to ribosomal protein S27 - Homo sapiens
Length = 83
Score = 46.0 bits (104), Expect = 3e-04
Identities = 27/59 (45%), Positives = 30/59 (50%)
Frame = +3
Query: 18 MPLAIDLLHPSPASERRKHKLKRLVPHPNSYFMDVKCPGCYKITTVFSHAQRVVVCAGC 194
MPL DL HP +RR KRLV + Y MDVKC GC K V+ VV C C
Sbjct: 1 MPLTKDLPHPL---QRRSGNKKRLVQSQDCYVMDVKCSGCPKAAVVWEFC--VVDCPAC 54
>UniRef50_Q8U474 Cluster: 30S ribosomal protein S27e; n=9;
Euryarchaeota|Rep: 30S ribosomal protein S27e -
Pyrococcus furiosus
Length = 63
Score = 46.0 bits (104), Expect = 3e-04
Identities = 21/49 (42%), Positives = 26/49 (53%)
Frame = +3
Query: 81 KRLVPHPNSYFMDVKCPGCYKITTVFSHAQRVVVCAGCSTILCQPTGGR 227
K ++P P S F+ VKC C VFSH V C C L +PTGG+
Sbjct: 3 KPIIPMPRSRFLRVKCIDCGNEQIVFSHPATKVRCLICGATLVEPTGGK 51
>UniRef50_Q8TY87 Cluster: 30S ribosomal protein S27e; n=13;
Archaea|Rep: 30S ribosomal protein S27e - Methanopyrus
kandleri
Length = 73
Score = 46.0 bits (104), Expect = 3e-04
Identities = 20/50 (40%), Positives = 28/50 (56%)
Frame = +3
Query: 87 LVPHPNSYFMDVKCPGCYKITTVFSHAQRVVVCAGCSTILCQPTGGRARL 236
LVP P S F+ V+C C +F +A V C C L +PTGG+A++
Sbjct: 15 LVPQPRSRFLRVECVDCGNEQIIFGNASTEVKCHICGRTLAKPTGGKAKI 64
>UniRef50_A7DPS1 Cluster: Ribosomal protein S27E; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: Ribosomal protein
S27E - Candidatus Nitrosopumilus maritimus SCM1
Length = 65
Score = 45.6 bits (103), Expect = 4e-04
Identities = 17/49 (34%), Positives = 27/49 (55%)
Frame = +3
Query: 90 VPHPNSYFMDVKCPGCYKITTVFSHAQRVVVCAGCSTILCQPTGGRARL 236
+P P+S F V C C ++ V+SHA V C C + + TG +A++
Sbjct: 8 IPKPSSKFQKVNCNECGELQIVYSHASTQVACNSCGNAIAEATGSKAKI 56
>UniRef50_Q6QI40 Cluster: LRRGT00168; n=1; Rattus norvegicus|Rep:
LRRGT00168 - Rattus norvegicus (Rat)
Length = 109
Score = 45.2 bits (102), Expect = 5e-04
Identities = 21/33 (63%), Positives = 25/33 (75%)
Frame = +3
Query: 21 PLAIDLLHPSPASERRKHKLKRLVPHPNSYFMD 119
PLA DL HP P E+RK+K KRLV PNSYF++
Sbjct: 8 PLAKDL-HPCPEEEKRKYKKKRLVQSPNSYFVE 39
>UniRef50_Q18KR1 Cluster: Ribosomal protein S27.eR; n=3;
Halobacteriaceae|Rep: Ribosomal protein S27.eR -
Haloquadratum walsbyi (strain DSM 16790)
Length = 75
Score = 41.5 bits (93), Expect = 0.006
Identities = 18/40 (45%), Positives = 21/40 (52%)
Frame = +3
Query: 111 FMDVKCPGCYKITTVFSHAQRVVVCAGCSTILCQPTGGRA 230
F ++CP C +F A VV CA C T L PTGG A
Sbjct: 5 FYQLQCPDCNNEQVIFGKASTVVNCAVCGTTLATPTGGDA 44
>UniRef50_Q1PS48 Cluster: Cxpwmw06; n=1; Periplaneta americana|Rep:
Cxpwmw06 - Periplaneta americana (American cockroach)
Length = 54
Score = 39.9 bits (89), Expect = 0.018
Identities = 15/35 (42%), Positives = 27/35 (77%)
Frame = -3
Query: 212 LTKDR*ASSADHHSLCVTKNCCNLVTARALNIHEI 108
LT+DR S +++LC+T++ C+LV RAL++H++
Sbjct: 20 LTQDRRTSCTHYYTLCMTEHRCDLVATRALHVHKV 54
>UniRef50_Q9HIX2 Cluster: 30S ribosomal protein S27e; n=4;
Thermoplasmatales|Rep: 30S ribosomal protein S27e -
Thermoplasma acidophilum
Length = 65
Score = 39.1 bits (87), Expect = 0.031
Identities = 14/41 (34%), Positives = 21/41 (51%)
Frame = +3
Query: 102 NSYFMDVKCPGCYKITTVFSHAQRVVVCAGCSTILCQPTGG 224
N +F+ +KC C + VF+ V C C + +PTGG
Sbjct: 13 NGHFVKIKCRDCGNVQVVFARPSSTVTCNICGATIAKPTGG 53
>UniRef50_A7PBG8 Cluster: Chromosome chr16 scaffold_10, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr16 scaffold_10, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 302
Score = 34.3 bits (75), Expect = 0.89
Identities = 15/48 (31%), Positives = 25/48 (52%)
Frame = +3
Query: 102 NSYFMDVKCPGCYKITTVFSHAQRVVVCAGCSTILCQPTGGRARLTEG 245
N++ + CP C + + ++V CAGC I+ QP G +R + G
Sbjct: 239 NNFVIKGNCPACRR--QFIGYKNQIVRCAGCGNIVWQPKGDVSRGSRG 284
>UniRef50_Q7X8M6 Cluster: OJ000223_09.12 protein; n=3; Oryza
sativa|Rep: OJ000223_09.12 protein - Oryza sativa subsp.
japonica (Rice)
Length = 424
Score = 31.5 bits (68), Expect = 6.3
Identities = 22/68 (32%), Positives = 32/68 (47%)
Frame = +3
Query: 27 AIDLLHPSPASERRKHKLKRLVPHPNSYFMDVKCPGCYKITTVFSHAQRVVVCAGCSTIL 206
A+ LLHP L ++PH S +D CP Y+I ++ RVV C+++
Sbjct: 148 AVRLLHPFTGDTAELPPLGTVLPHLGSRLLD--CPAPYRIRSL----ARVV----CASVS 197
Query: 207 CQPTGGRA 230
C TG A
Sbjct: 198 CSATGAGA 205
>UniRef50_Q7QFC6 Cluster: ENSANGP00000020801; n=2; Culicidae|Rep:
ENSANGP00000020801 - Anopheles gambiae str. PEST
Length = 611
Score = 31.1 bits (67), Expect = 8.3
Identities = 15/36 (41%), Positives = 18/36 (50%)
Frame = +3
Query: 123 KCPGCYKITTVFSHAQRVVVCAGCSTILCQPTGGRA 230
+CP C K TV Q C C TI CQP G++
Sbjct: 545 QCPNCKKEFTVTRRKQH---CRHCGTIYCQPCLGKS 577
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 398,263,701
Number of Sequences: 1657284
Number of extensions: 7023724
Number of successful extensions: 15948
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 15660
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15946
length of database: 575,637,011
effective HSP length: 92
effective length of database: 423,166,883
effective search space used: 16926675320
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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