Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0028
         (400 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY118959-1|AAM50819.1|   84|Drosophila melanogaster LD37859p pro...   160   5e-40
AE014297-3747|AAF56428.1|   84|Drosophila melanogaster CG10423-P...   160   5e-40
AY113459-1|AAM29464.1|  361|Drosophila melanogaster RE36989p pro...    29   1.7  
AE014134-864|AAF52211.2|  388|Drosophila melanogaster CG14040-PA...    29   1.7  
AY051495-1|AAK92919.1|  490|Drosophila melanogaster GH14842p pro...    28   5.3  
AF231037-1|AAF34806.1|  490|Drosophila melanogaster SP512 protei...    28   5.3  
AF220194-1|AAL50332.1|  490|Drosophila melanogaster APPL interac...    28   5.3  
AE014296-182|AAN11462.1|  490|Drosophila melanogaster CG1200-PB,...    28   5.3  
BT001795-1|AAN71550.1|  483|Drosophila melanogaster RH26053p pro...    27   7.0  
AE014296-183|AAF47446.1|  483|Drosophila melanogaster CG1200-PA,...    27   7.0  

>AY118959-1|AAM50819.1|   84|Drosophila melanogaster LD37859p
           protein.
          Length = 84

 Score =  160 bits (389), Expect = 5e-40
 Identities = 70/79 (88%), Positives = 74/79 (93%)
 Frame = +3

Query: 18  MPLAIDLLHPSPASERRKHKLKRLVPHPNSYFMDVKCPGCYKITTVFSHAQRVVVCAGCS 197
           MPLA DLLHP PA E+RKHKLKRLV HPNSYFMDVKCPGCY+ITTVFSHAQ VVVCAGC+
Sbjct: 1   MPLAKDLLHPLPAEEKRKHKLKRLVQHPNSYFMDVKCPGCYRITTVFSHAQGVVVCAGCA 60

Query: 198 TILCQPTGGRARLTEGCSF 254
           TILCQPTGGRA+LTEGCSF
Sbjct: 61  TILCQPTGGRAKLTEGCSF 79


>AE014297-3747|AAF56428.1|   84|Drosophila melanogaster CG10423-PA
           protein.
          Length = 84

 Score =  160 bits (389), Expect = 5e-40
 Identities = 70/79 (88%), Positives = 74/79 (93%)
 Frame = +3

Query: 18  MPLAIDLLHPSPASERRKHKLKRLVPHPNSYFMDVKCPGCYKITTVFSHAQRVVVCAGCS 197
           MPLA DLLHP PA E+RKHKLKRLV HPNSYFMDVKCPGCY+ITTVFSHAQ VVVCAGC+
Sbjct: 1   MPLAKDLLHPLPAEEKRKHKLKRLVQHPNSYFMDVKCPGCYRITTVFSHAQGVVVCAGCA 60

Query: 198 TILCQPTGGRARLTEGCSF 254
           TILCQPTGGRA+LTEGCSF
Sbjct: 61  TILCQPTGGRAKLTEGCSF 79


>AY113459-1|AAM29464.1|  361|Drosophila melanogaster RE36989p
           protein.
          Length = 361

 Score = 29.5 bits (63), Expect = 1.7
 Identities = 10/28 (35%), Positives = 16/28 (57%)
 Frame = +1

Query: 295 YLILRFFFQLYNGVIFFKFTTMDPSEHY 378
           Y++  F + LYN + F    T DP+ +Y
Sbjct: 88  YMVPAFLYCLYNNLAFVNLATFDPTTYY 115


>AE014134-864|AAF52211.2|  388|Drosophila melanogaster CG14040-PA
           protein.
          Length = 388

 Score = 29.5 bits (63), Expect = 1.7
 Identities = 10/28 (35%), Positives = 16/28 (57%)
 Frame = +1

Query: 295 YLILRFFFQLYNGVIFFKFTTMDPSEHY 378
           Y++  F + LYN + F    T DP+ +Y
Sbjct: 88  YMVPAFLYCLYNNLAFVNLATFDPTTYY 115


>AY051495-1|AAK92919.1|  490|Drosophila melanogaster GH14842p
           protein.
          Length = 490

 Score = 27.9 bits (59), Expect = 5.3
 Identities = 14/35 (40%), Positives = 21/35 (60%)
 Frame = +3

Query: 3   SARVTMPLAIDLLHPSPASERRKHKLKRLVPHPNS 107
           SA VT+  + DLL P+ A+ RR+ KL  +  +  S
Sbjct: 130 SAPVTIGASTDLLAPNTAATRRRRKLPEIPKNKKS 164


>AF231037-1|AAF34806.1|  490|Drosophila melanogaster SP512 protein
           protein.
          Length = 490

 Score = 27.9 bits (59), Expect = 5.3
 Identities = 14/35 (40%), Positives = 21/35 (60%)
 Frame = +3

Query: 3   SARVTMPLAIDLLHPSPASERRKHKLKRLVPHPNS 107
           SA VT+  + DLL P+ A+ RR+ KL  +  +  S
Sbjct: 130 SAPVTIGASTDLLAPNTAATRRRRKLPEIPKNKKS 164


>AF220194-1|AAL50332.1|  490|Drosophila melanogaster APPL
           interaction protein 1 protein.
          Length = 490

 Score = 27.9 bits (59), Expect = 5.3
 Identities = 14/35 (40%), Positives = 21/35 (60%)
 Frame = +3

Query: 3   SARVTMPLAIDLLHPSPASERRKHKLKRLVPHPNS 107
           SA VT+  + DLL P+ A+ RR+ KL  +  +  S
Sbjct: 130 SAPVTIGASTDLLAPNTAATRRRRKLPEIPKNKKS 164


>AE014296-182|AAN11462.1|  490|Drosophila melanogaster CG1200-PB,
           isoform B protein.
          Length = 490

 Score = 27.9 bits (59), Expect = 5.3
 Identities = 14/35 (40%), Positives = 21/35 (60%)
 Frame = +3

Query: 3   SARVTMPLAIDLLHPSPASERRKHKLKRLVPHPNS 107
           SA VT+  + DLL P+ A+ RR+ KL  +  +  S
Sbjct: 130 SAPVTIGASTDLLAPNTAATRRRRKLPEIPKNKKS 164


>BT001795-1|AAN71550.1|  483|Drosophila melanogaster RH26053p
           protein.
          Length = 483

 Score = 27.5 bits (58), Expect = 7.0
 Identities = 13/29 (44%), Positives = 19/29 (65%)
 Frame = +3

Query: 3   SARVTMPLAIDLLHPSPASERRKHKLKRL 89
           SA VT+  + DLL P+ A+ RR+ KL  +
Sbjct: 130 SAPVTIGASTDLLAPNTAATRRRRKLPEI 158


>AE014296-183|AAF47446.1|  483|Drosophila melanogaster CG1200-PA,
           isoform A protein.
          Length = 483

 Score = 27.5 bits (58), Expect = 7.0
 Identities = 13/29 (44%), Positives = 19/29 (65%)
 Frame = +3

Query: 3   SARVTMPLAIDLLHPSPASERRKHKLKRL 89
           SA VT+  + DLL P+ A+ RR+ KL  +
Sbjct: 130 SAPVTIGASTDLLAPNTAATRRRRKLPEI 158


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,074,972
Number of Sequences: 53049
Number of extensions: 334608
Number of successful extensions: 835
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 804
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 835
length of database: 24,988,368
effective HSP length: 77
effective length of database: 20,903,595
effective search space used: 1149697725
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)