Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0025
         (832 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF990671-1|ABS30732.1| 1256|Anopheles gambiae voltage-gated calc...    25   3.7  
U29486-1|AAC46995.1|  695|Anopheles gambiae ATP-binding-cassette...    24   6.5  
U29485-1|AAC46994.1|  695|Anopheles gambiae ATP-binding-cassette...    24   6.5  
U29484-1|AAC47423.1|  673|Anopheles gambiae ATP-binding-cassette...    24   6.5  

>EF990671-1|ABS30732.1| 1256|Anopheles gambiae voltage-gated calcium
           channel alpha2-delta subunit 1 protein.
          Length = 1256

 Score = 24.6 bits (51), Expect = 3.7
 Identities = 9/35 (25%), Positives = 23/35 (65%), Gaps = 1/35 (2%)
 Frame = +3

Query: 318 IDLPEINDPPNIVTD-DEPKVEDYIKLGRRDMIMQ 419
           ++LPE+++P N + +  + +  + ++  R +M+MQ
Sbjct: 577 VELPEVDNPSNTINERHDQRYANTLQELRNEMVMQ 611


>U29486-1|AAC46995.1|  695|Anopheles gambiae ATP-binding-cassette
           protein protein.
          Length = 695

 Score = 23.8 bits (49), Expect = 6.5
 Identities = 14/51 (27%), Positives = 25/51 (49%)
 Frame = +2

Query: 626 YYVNKYFVKTKDLRYYTIPLLTFITSTITYPMVVVSTCMAVAGSSLRLATL 778
           Y V+ YF+            + F+ ++ITYPM+ + T      ++L + TL
Sbjct: 510 YRVDTYFLGKTIAELPLFIAVPFVFTSITYPMIGLRTGATHYLTTLFIVTL 560


>U29485-1|AAC46994.1|  695|Anopheles gambiae ATP-binding-cassette
           protein protein.
          Length = 695

 Score = 23.8 bits (49), Expect = 6.5
 Identities = 14/51 (27%), Positives = 25/51 (49%)
 Frame = +2

Query: 626 YYVNKYFVKTKDLRYYTIPLLTFITSTITYPMVVVSTCMAVAGSSLRLATL 778
           Y V+ YF+            + F+ ++ITYPM+ + T      ++L + TL
Sbjct: 510 YRVDTYFLGKTIAELPLFIAVPFVFTSITYPMIGLRTGATHYLTTLFIVTL 560


>U29484-1|AAC47423.1|  673|Anopheles gambiae ATP-binding-cassette
           protein protein.
          Length = 673

 Score = 23.8 bits (49), Expect = 6.5
 Identities = 14/51 (27%), Positives = 25/51 (49%)
 Frame = +2

Query: 626 YYVNKYFVKTKDLRYYTIPLLTFITSTITYPMVVVSTCMAVAGSSLRLATL 778
           Y V+ YF+            + F+ ++ITYPM+ + T      ++L + TL
Sbjct: 488 YRVDTYFLGKTIAELPLFIAVPFVFTSITYPMIGLRTGATHYLTTLFIVTL 538


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 941,399
Number of Sequences: 2352
Number of extensions: 20569
Number of successful extensions: 42
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 42
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 87651612
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)