Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--0025
(832 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF000264-8|AAK70649.2| 165|Caenorhabditis elegans Hypothetical ... 50 2e-06
AF000264-10|AAC71129.2| 272|Caenorhabditis elegans Hypothetical... 40 0.003
X76114-1|CAA53720.1| 290|Caenorhabditis elegans Oxoglutarate/ma... 33 0.19
U23525-8|AAC46570.1| 290|Caenorhabditis elegans Hypothetical pr... 33 0.19
U64857-6|AAN84847.1| 172|Caenorhabditis elegans Hypothetical pr... 29 4.1
Z66567-9|CAA91495.1| 1268|Caenorhabditis elegans Hypothetical pr... 29 5.4
Z66562-7|CAA91467.1| 1268|Caenorhabditis elegans Hypothetical pr... 29 5.4
X65055-1|CAA46191.1| 1254|Caenorhabditis elegans P-glycoprotein ... 29 5.4
U00052-8|AAK21421.2| 707|Caenorhabditis elegans Hypothetical pr... 28 7.1
AL023835-10|CAA19494.2| 691|Caenorhabditis elegans Hypothetical... 28 7.1
Z71259-11|CAI46575.1| 370|Caenorhabditis elegans Hypothetical p... 28 9.4
Z71259-10|CAA95794.4| 373|Caenorhabditis elegans Hypothetical p... 28 9.4
Z69662-5|CAA93500.3| 449|Caenorhabditis elegans Hypothetical pr... 28 9.4
>AF000264-8|AAK70649.2| 165|Caenorhabditis elegans Hypothetical
protein F43E2.11 protein.
Length = 165
Score = 50.4 bits (115), Expect = 2e-06
Identities = 26/87 (29%), Positives = 40/87 (45%), Gaps = 2/87 (2%)
Frame = +1
Query: 16 NMDEIEKERIAALPSQILVTTICHPMEYAKVLIQLGYEPLAPR--RSTTLFGRPAMILPN 189
N+D + + I + ++ T HP+ + LIQ GYEP R FG ILPN
Sbjct: 61 NLDHLRQRSIQSEFQTLVAMTSVHPITVVRELIQFGYEPFPTTCGRKYIFFGEEMAILPN 120
Query: 190 VFQYIKYIKASDGFFGCYRGLSQECLV 270
+ Y+K + + F ++GL V
Sbjct: 121 ILSYMKQLSKAKKFSTLFKGLDSAICV 147
>AF000264-10|AAC71129.2| 272|Caenorhabditis elegans Hypothetical
protein F43E2.7a protein.
Length = 272
Score = 39.5 bits (88), Expect = 0.003
Identities = 18/42 (42%), Positives = 25/42 (59%)
Frame = +3
Query: 387 IKLGRRDMIMQTVAVVIAHPFHVVSVRMMASFIGKEEHYSSC 512
I+ G RD +++ VAV A PF V R +A IG E Y++C
Sbjct: 74 IRNGFRDSVIRVVAVTAARPFAVCFARQVAQVIGNETKYTTC 115
Score = 37.9 bits (84), Expect = 0.009
Identities = 27/103 (26%), Positives = 49/103 (47%), Gaps = 16/103 (15%)
Frame = +2
Query: 518 AIVSIYKDDGILGFLHGLIPKVLGDLTCLAVTGVLAYYVNKYFVK--------------- 652
A+ I K +G G GL P+++G+L + ++ + + + ++
Sbjct: 118 ALAVIGKQEGPGGLFSGLAPQIVGELLVIWGVHLITHGIQRAILRIEFGDTKNKDETKAK 177
Query: 653 -TKDLRYYTIPLLTFITSTITYPMVVVSTCMAVAGSSLRLATL 778
KD+ + + F+ ++ YP VVST MAVAGS L ++ L
Sbjct: 178 AAKDVHKFIHTAVPFLVNSFGYPYSVVSTVMAVAGSGLAVSFL 220
>X76114-1|CAA53720.1| 290|Caenorhabditis elegans
Oxoglutarate/malate carrier protein protein.
Length = 290
Score = 33.5 bits (73), Expect = 0.19
Identities = 27/83 (32%), Positives = 40/83 (48%), Gaps = 4/83 (4%)
Frame = +2
Query: 452 CCVSSNDGLIYWERRTLQ---LLLGAI-VSIYKDDGILGFLHGLIPKVLGDLTCLAVTGV 619
CC D L+ + +T Q L +G + + IYK+DGIL F +G+ VL LT
Sbjct: 24 CCTHPLD-LLKVQLQTQQQGKLTIGQLSLKIYKNDGILAFYNGVSASVLRQLTYSTTRFG 82
Query: 620 LAYYVNKYFVKTKDLRYYTIPLL 688
+ V K + + L +Y LL
Sbjct: 83 IYETVKKQLPQDQPLPFYQKALL 105
>U23525-8|AAC46570.1| 290|Caenorhabditis elegans Hypothetical
protein K11G12.5 protein.
Length = 290
Score = 33.5 bits (73), Expect = 0.19
Identities = 27/83 (32%), Positives = 40/83 (48%), Gaps = 4/83 (4%)
Frame = +2
Query: 452 CCVSSNDGLIYWERRTLQ---LLLGAI-VSIYKDDGILGFLHGLIPKVLGDLTCLAVTGV 619
CC D L+ + +T Q L +G + + IYK+DGIL F +G+ VL LT
Sbjct: 24 CCTHPLD-LLKVQLQTQQQGKLTIGQLSLKIYKNDGILAFYNGVSASVLRQLTYSTTRFG 82
Query: 620 LAYYVNKYFVKTKDLRYYTIPLL 688
+ V K + + L +Y LL
Sbjct: 83 IYETVKKQLPQDQPLPFYQKALL 105
>U64857-6|AAN84847.1| 172|Caenorhabditis elegans Hypothetical
protein C37C3.12 protein.
Length = 172
Score = 29.1 bits (62), Expect = 4.1
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = -1
Query: 712 CYCACYKCKQWNRVISK 662
CYC C KCK++NR+ K
Sbjct: 107 CYCCC-KCKEYNRIHKK 122
>Z66567-9|CAA91495.1| 1268|Caenorhabditis elegans Hypothetical
protein ZK455.7 protein.
Length = 1268
Score = 28.7 bits (61), Expect = 5.4
Identities = 13/62 (20%), Positives = 29/62 (46%)
Frame = +2
Query: 566 GLIPKVLGDLTCLAVTGVLAYYVNKYFVKTKDLRYYTIPLLTFITSTITYPMVVVSTCMA 745
G+ +V+ + + + +N+Y + + R I + +P++++ TCMA
Sbjct: 236 GMANEVIAGIRTVMAFNAQPFEINRYAHQLNEARRMGIRKAIILAICTAFPLMLMFTCMA 295
Query: 746 VA 751
VA
Sbjct: 296 VA 297
>Z66562-7|CAA91467.1| 1268|Caenorhabditis elegans Hypothetical
protein ZK455.7 protein.
Length = 1268
Score = 28.7 bits (61), Expect = 5.4
Identities = 13/62 (20%), Positives = 29/62 (46%)
Frame = +2
Query: 566 GLIPKVLGDLTCLAVTGVLAYYVNKYFVKTKDLRYYTIPLLTFITSTITYPMVVVSTCMA 745
G+ +V+ + + + +N+Y + + R I + +P++++ TCMA
Sbjct: 236 GMANEVIAGIRTVMAFNAQPFEINRYAHQLNEARRMGIRKAIILAICTAFPLMLMFTCMA 295
Query: 746 VA 751
VA
Sbjct: 296 VA 297
>X65055-1|CAA46191.1| 1254|Caenorhabditis elegans P-glycoprotein C
protein.
Length = 1254
Score = 28.7 bits (61), Expect = 5.4
Identities = 13/62 (20%), Positives = 29/62 (46%)
Frame = +2
Query: 566 GLIPKVLGDLTCLAVTGVLAYYVNKYFVKTKDLRYYTIPLLTFITSTITYPMVVVSTCMA 745
G+ +V+ + + + +N+Y + + R I + +P++++ TCMA
Sbjct: 236 GMANEVIAGIRTVMAFNAQPFEINRYAHQLNEARRMGIRKAIILAICTAFPLMLMFTCMA 295
Query: 746 VA 751
VA
Sbjct: 296 VA 297
>U00052-8|AAK21421.2| 707|Caenorhabditis elegans Hypothetical
protein K02F3.2 protein.
Length = 707
Score = 28.3 bits (60), Expect = 7.1
Identities = 14/54 (25%), Positives = 25/54 (46%)
Frame = +2
Query: 512 LGAIVSIYKDDGILGFLHGLIPKVLGDLTCLAVTGVLAYYVNKYFVKTKDLRYY 673
L + K +G+LG GL+P+++G A+ + Y+ F K + Y
Sbjct: 416 LDCFKKVVKFEGLLGLYRGLLPQIVGVAPEKAIKLTMNDYMRDKFTKDGKIPLY 469
>AL023835-10|CAA19494.2| 691|Caenorhabditis elegans Hypothetical
protein Y37A1B.11 protein.
Length = 691
Score = 28.3 bits (60), Expect = 7.1
Identities = 12/33 (36%), Positives = 22/33 (66%)
Frame = +2
Query: 215 RLRMVSSVATGAYRKNAWSYRRKSTHIEGNSSR 313
R + ++SVA+G ++A +KS+H+ G+S R
Sbjct: 654 RSQSITSVASGKTSRSATPESKKSSHLSGSSRR 686
>Z71259-11|CAI46575.1| 370|Caenorhabditis elegans Hypothetical
protein F13G3.7b protein.
Length = 370
Score = 27.9 bits (59), Expect = 9.4
Identities = 14/32 (43%), Positives = 20/32 (62%)
Frame = +2
Query: 491 RRTLQLLLGAIVSIYKDDGILGFLHGLIPKVL 586
RRTL L + I ++YK DGI GF G + ++
Sbjct: 202 RRTLGLRV--IRAVYKVDGIFGFYRGFLSAIM 231
>Z71259-10|CAA95794.4| 373|Caenorhabditis elegans Hypothetical
protein F13G3.7a protein.
Length = 373
Score = 27.9 bits (59), Expect = 9.4
Identities = 14/32 (43%), Positives = 20/32 (62%)
Frame = +2
Query: 491 RRTLQLLLGAIVSIYKDDGILGFLHGLIPKVL 586
RRTL L + I ++YK DGI GF G + ++
Sbjct: 205 RRTLGLRV--IRAVYKVDGIFGFYRGFLSAIM 234
>Z69662-5|CAA93500.3| 449|Caenorhabditis elegans Hypothetical
protein F56D5.6 protein.
Length = 449
Score = 27.9 bits (59), Expect = 9.4
Identities = 8/27 (29%), Positives = 19/27 (70%)
Frame = +3
Query: 321 DLPEINDPPNIVTDDEPKVEDYIKLGR 401
++ E+N+ N++ D++ +ED ++L R
Sbjct: 292 NVEEVNESGNVILDEDENIEDNVELAR 318
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,233,424
Number of Sequences: 27780
Number of extensions: 447724
Number of successful extensions: 1073
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1032
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1072
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2061488408
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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