Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0018
         (491 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF080565-1|AAC31945.1|  324|Anopheles gambiae Antennapedia homeo...    25   1.4  
AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific tran...    24   2.5  
AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific tran...    24   2.5  
AY725820-1|AAU50568.1|  593|Anopheles gambiae fruitless female-s...    24   2.5  
CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskel...    23   7.5  
AF487534-1|AAL93295.1|  509|Anopheles gambiae cytochrome P450 CY...    23   7.5  
AF119382-1|AAD27585.1|  394|Anopheles gambiae caudal protein hom...    23   7.5  

>AF080565-1|AAC31945.1|  324|Anopheles gambiae Antennapedia homeotic
           protein protein.
          Length = 324

 Score = 25.0 bits (52), Expect = 1.4
 Identities = 11/24 (45%), Positives = 16/24 (66%)
 Frame = -2

Query: 250 GVSCHPFIVIHQTPGHVALEPHSG 179
           G  C+P  V HQTP H+A+  ++G
Sbjct: 170 GQECYPEQV-HQTPQHMAMYTNAG 192


>AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific
           transcription factor FRU-MA protein.
          Length = 960

 Score = 24.2 bits (50), Expect = 2.5
 Identities = 9/34 (26%), Positives = 16/34 (47%)
 Frame = +3

Query: 300 HPAQVRVRLQGDLEEQGHRPRLRARHYRHDHRRG 401
           HP+  + + Q     Q  +P  +  H+ H H+ G
Sbjct: 259 HPSSHQQQSQQHPSSQHQQPTHQTHHHHHHHQHG 292


>AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific
           transcription factor FRU-MB protein.
          Length = 759

 Score = 24.2 bits (50), Expect = 2.5
 Identities = 9/34 (26%), Positives = 16/34 (47%)
 Frame = +3

Query: 300 HPAQVRVRLQGDLEEQGHRPRLRARHYRHDHRRG 401
           HP+  + + Q     Q  +P  +  H+ H H+ G
Sbjct: 259 HPSSHQQQSQQHPSSQHQQPTHQTHHHHHHHQHG 292


>AY725820-1|AAU50568.1|  593|Anopheles gambiae fruitless
           female-specific zinc-fingerC isoform protein.
          Length = 593

 Score = 24.2 bits (50), Expect = 2.5
 Identities = 9/34 (26%), Positives = 16/34 (47%)
 Frame = +3

Query: 300 HPAQVRVRLQGDLEEQGHRPRLRARHYRHDHRRG 401
           HP+  + + Q     Q  +P  +  H+ H H+ G
Sbjct: 211 HPSSHQQQSQQHPSSQHQQPTHQTHHHHHHHQHG 244


>CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative
           cytoskeletal structural protein protein.
          Length = 1645

 Score = 22.6 bits (46), Expect = 7.5
 Identities = 14/60 (23%), Positives = 26/60 (43%), Gaps = 2/60 (3%)
 Frame = +2

Query: 86  GWATS--PEVGLEDDDRITYYRAALENILDSLDAGVRLKGYMAWSLMDNYEWMAGYTELS 259
           GW  +  P+V    D  +T   A    + + L+  +  K  + WS   ++  + G  E+S
Sbjct: 584 GWEQTKPPDVPNRIDIDVTGCSAVSLRLYEPLEGAITTKFKVQWSSRSDFSNVVGEREIS 643


>AF487534-1|AAL93295.1|  509|Anopheles gambiae cytochrome P450
           CYP6P3 protein.
          Length = 509

 Score = 22.6 bits (46), Expect = 7.5
 Identities = 12/42 (28%), Positives = 18/42 (42%)
 Frame = +3

Query: 231 NGWQDTPNFRFVRG*LFGSRPPSHPAQVRVRLQGDLEEQGHR 356
           NG+   PN  F+ G   G     H A +   L    +++G R
Sbjct: 32  NGFPYAPNPHFLFGHAKGQAQTRHGADIHQELYRYFKQRGER 73


>AF119382-1|AAD27585.1|  394|Anopheles gambiae caudal protein
           homolog protein.
          Length = 394

 Score = 22.6 bits (46), Expect = 7.5
 Identities = 10/21 (47%), Positives = 12/21 (57%), Gaps = 1/21 (4%)
 Frame = -2

Query: 220 HQTPGH-VALEPHSGIETIQN 161
           H  PGH  AL  H G+ T Q+
Sbjct: 350 HHHPGHHAALHAHLGVPTSQH 370


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 505,157
Number of Sequences: 2352
Number of extensions: 10641
Number of successful extensions: 24
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 43554477
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)