Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0018
         (491 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY069733-1|AAL39878.1|  541|Drosophila melanogaster LP05116p pro...    83   1e-16
AE014296-2793|AAF49418.2|  541|Drosophila melanogaster CG9701-PA...    83   1e-16

>AY069733-1|AAL39878.1|  541|Drosophila melanogaster LP05116p
           protein.
          Length = 541

 Score = 83.4 bits (197), Expect = 1e-16
 Identities = 37/81 (45%), Positives = 52/81 (64%)
 Frame = +2

Query: 11  PNSIYDVLTHLKNKYNDPIFYVTENGWATSPEVGLEDDDRITYYRAALENILDSLDAGVR 190
           P  +Y++L  +  +YN P   VTENG   S   GLED  R+ YY   L  +LD+++ G  
Sbjct: 382 PKGMYNLLMWIHREYNAPEIIVTENG--VSDRGGLEDYARVDYYNLYLSAVLDAMEDGAN 439

Query: 191 LKGYMAWSLMDNYEWMAGYTE 253
           + GY+AWSLMD+YEW AG++E
Sbjct: 440 ISGYIAWSLMDSYEWKAGFSE 460



 Score = 46.4 bits (105), Expect = 2e-05
 Identities = 19/39 (48%), Positives = 26/39 (66%)
 Frame = +1

Query: 256 FGLYEVDFSDPARPRTPRKSAFVYKEILRSRVIDHDYEP 372
           FGLY VDF+ P R RTP+ SA V+ ++ ++  ID  Y P
Sbjct: 462 FGLYHVDFNSPQRTRTPKISARVFAQLCKTNTIDWSYRP 500


>AE014296-2793|AAF49418.2|  541|Drosophila melanogaster CG9701-PA
           protein.
          Length = 541

 Score = 83.4 bits (197), Expect = 1e-16
 Identities = 37/81 (45%), Positives = 52/81 (64%)
 Frame = +2

Query: 11  PNSIYDVLTHLKNKYNDPIFYVTENGWATSPEVGLEDDDRITYYRAALENILDSLDAGVR 190
           P  +Y++L  +  +YN P   VTENG   S   GLED  R+ YY   L  +LD+++ G  
Sbjct: 382 PKGMYNLLMWIHREYNAPEIIVTENG--VSDRGGLEDYARVDYYNLYLSAVLDAMEDGAN 439

Query: 191 LKGYMAWSLMDNYEWMAGYTE 253
           + GY+AWSLMD+YEW AG++E
Sbjct: 440 ISGYIAWSLMDSYEWKAGFSE 460



 Score = 46.4 bits (105), Expect = 2e-05
 Identities = 19/39 (48%), Positives = 26/39 (66%)
 Frame = +1

Query: 256 FGLYEVDFSDPARPRTPRKSAFVYKEILRSRVIDHDYEP 372
           FGLY VDF+ P R RTP+ SA V+ ++ ++  ID  Y P
Sbjct: 462 FGLYHVDFNSPQRTRTPKISARVFAQLCKTNTIDWSYRP 500


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,701,780
Number of Sequences: 53049
Number of extensions: 436986
Number of successful extensions: 1295
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1274
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1293
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1721789184
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)