Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--0015
(461 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81460-2|CAB03831.1| 439|Caenorhabditis elegans Hypothetical pr... 29 1.6
AF000193-1|AAB52891.1| 715|Caenorhabditis elegans Hypothetical ... 29 2.1
AF099918-1|AAK29840.2| 820|Caenorhabditis elegans Hypothetical ... 28 2.8
AF068721-9|AAC19265.1| 570|Caenorhabditis elegans Hypothetical ... 28 2.8
U40933-6|AAQ23123.1| 199|Caenorhabditis elegans C.elegans homeo... 28 3.7
Z81034-4|CAB02729.1| 541|Caenorhabditis elegans Hypothetical pr... 27 6.5
Z82275-3|CAL44962.1| 478|Caenorhabditis elegans Hypothetical pr... 27 8.6
Z82265-8|CAB05169.2| 478|Caenorhabditis elegans Hypothetical pr... 27 8.6
Z81461-6|CAB03837.1| 272|Caenorhabditis elegans Hypothetical pr... 27 8.6
U37429-9|AAA79344.3| 796|Caenorhabditis elegans Hypothetical pr... 27 8.6
AF039052-7|AAO91672.2| 462|Caenorhabditis elegans Hypothetical ... 27 8.6
AF039052-6|AAF98635.2| 534|Caenorhabditis elegans Hypothetical ... 27 8.6
AC006693-10|AAF60376.1| 578|Caenorhabditis elegans Hypothetical... 27 8.6
>Z81460-2|CAB03831.1| 439|Caenorhabditis elegans Hypothetical
protein C04A11.2 protein.
Length = 439
Score = 29.1 bits (62), Expect = 1.6
Identities = 19/72 (26%), Positives = 30/72 (41%)
Frame = -1
Query: 245 TSPIVIAAPMSLTMMLSARETEAVASATTFSRASPPEAKDLRTRLKMRISPSAEPTDAET 66
++P+V LT SAR + AS +P +++R S + P T
Sbjct: 153 STPVVRNILQQLTTPRSARTSTRAASGNRTPTGTPNMTRNVRPVTNRTSSSNVSPAAQVT 212
Query: 65 LGTARTKLSRVP 30
GT+ SR+P
Sbjct: 213 PGTSSNHRSRLP 224
>AF000193-1|AAB52891.1| 715|Caenorhabditis elegans Hypothetical
protein T20B6.2 protein.
Length = 715
Score = 28.7 bits (61), Expect = 2.1
Identities = 22/101 (21%), Positives = 49/101 (48%)
Frame = -1
Query: 416 YRSSNLQ*SVDDELGDVLQNTADLGCVVRQVDRDLL*EVVDGWSNFASEEIDLELDLTSP 237
Y SSN+ D+L ++L+N L +V + ++ ++DG + S++ EL P
Sbjct: 67 YNSSNIIIISVDKLTNILENMQSLARLVNGISLEI--GLMDG--SIPSDDAIAELLHMGP 122
Query: 236 IVIAAPMSLTMMLSARETEAVASATTFSRASPPEAKDLRTR 114
+ + +S+ +++ + + + + ++SP E L R
Sbjct: 123 VKLQELISMDTAAASKSIKDLGTLSGTLQSSPAEVTTLENR 163
>AF099918-1|AAK29840.2| 820|Caenorhabditis elegans Hypothetical
protein H05C05.1a protein.
Length = 820
Score = 28.3 bits (60), Expect = 2.8
Identities = 14/55 (25%), Positives = 26/55 (47%)
Frame = -1
Query: 194 ARETEAVASATTFSRASPPEAKDLRTRLKMRISPSAEPTDAETLGTARTKLSRVP 30
A + E +S + ++ EAK + K + PSA +D + T T +++ P
Sbjct: 689 AEKPEGSSSGSATEKSKEIEAKSKKDDTKKPLEPSAASSDPSSSSTTTTTITKEP 743
>AF068721-9|AAC19265.1| 570|Caenorhabditis elegans Hypothetical
protein ZK1055.7 protein.
Length = 570
Score = 28.3 bits (60), Expect = 2.8
Identities = 13/28 (46%), Positives = 19/28 (67%)
Frame = -1
Query: 140 PEAKDLRTRLKMRISPSAEPTDAETLGT 57
P + D + R+K+ +SP+A P DAE GT
Sbjct: 491 PRSTDEKIRVKL-VSPAATPYDAEKAGT 517
>U40933-6|AAQ23123.1| 199|Caenorhabditis elegans C.elegans homeobox
protein 19,isoform b protein.
Length = 199
Score = 27.9 bits (59), Expect = 3.7
Identities = 18/64 (28%), Positives = 32/64 (50%), Gaps = 3/64 (4%)
Frame = -1
Query: 302 VVDGWSNFASEEI---DLELDLTSPIVIAAPMSLTMMLSARETEAVASATTFSRASPPEA 132
V+DGW+N A+ ++ + DL +P ++ M L +SAR+ + S + P +A
Sbjct: 43 VIDGWTNMATSQLAMFAIANDLRTPTLVELQMLLG--VSARKHDYKRSRKSVCERKPRQA 100
Query: 131 KDLR 120
R
Sbjct: 101 YSAR 104
>Z81034-4|CAB02729.1| 541|Caenorhabditis elegans Hypothetical
protein C15C6.3 protein.
Length = 541
Score = 27.1 bits (57), Expect = 6.5
Identities = 18/78 (23%), Positives = 28/78 (35%)
Frame = -1
Query: 245 TSPIVIAAPMSLTMMLSARETEAVASATTFSRASPPEAKDLRTRLKMRISPSAEPTDAET 66
T P A P L + + + + + +PP + R K +PSA DA
Sbjct: 82 TDPDKRAIPSLLDIRTHKPQMKDLGPQVIYPNRAPPNPSSSQNRFKRDSAPSAPARDAPM 141
Query: 65 LGTARTKLSRVPT*LTRR 12
+ P +TRR
Sbjct: 142 FRGRTISQRQAPPQITRR 159
>Z82275-3|CAL44962.1| 478|Caenorhabditis elegans Hypothetical
protein F02H6.2 protein.
Length = 478
Score = 26.6 bits (56), Expect = 8.6
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -1
Query: 329 QVDRDLL*EVVDGWSNFASEEIDLELD 249
Q +RD EV+D F EE+D E+D
Sbjct: 28 QAERDGWNEVIDNVGEFEDEEVDEEVD 54
>Z82265-8|CAB05169.2| 478|Caenorhabditis elegans Hypothetical
protein F02H6.2 protein.
Length = 478
Score = 26.6 bits (56), Expect = 8.6
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -1
Query: 329 QVDRDLL*EVVDGWSNFASEEIDLELD 249
Q +RD EV+D F EE+D E+D
Sbjct: 28 QAERDGWNEVIDNVGEFEDEEVDEEVD 54
>Z81461-6|CAB03837.1| 272|Caenorhabditis elegans Hypothetical
protein C04F12.8 protein.
Length = 272
Score = 26.6 bits (56), Expect = 8.6
Identities = 21/64 (32%), Positives = 30/64 (46%), Gaps = 1/64 (1%)
Frame = -1
Query: 215 SLTMMLSARETEAVASATTFSRASPPEAKDLRTR-LKMRISPSAEPTDAETLGTARTKLS 39
SL S+ + SA+T+ R S A L T L+ SPS+ P + L T+ + S
Sbjct: 187 SLPSAQSSASKQRAFSASTY-RPSVSSASSLATSSLRRAYSPSSLPASSLALTTSYSLFS 245
Query: 38 RVPT 27
PT
Sbjct: 246 PAPT 249
>U37429-9|AAA79344.3| 796|Caenorhabditis elegans Hypothetical
protein F09E5.5 protein.
Length = 796
Score = 26.6 bits (56), Expect = 8.6
Identities = 12/41 (29%), Positives = 20/41 (48%)
Frame = +3
Query: 261 INLFGREVGPAVNNFLEKIPVYLTDYAAEVSRVLEYVAQLV 383
INL +E + + Y TDY AE S+ E+ + ++
Sbjct: 459 INLTIQEFNELAGKYRDAFTAYKTDYFAERSKYQEFTSNII 499
>AF039052-7|AAO91672.2| 462|Caenorhabditis elegans Hypothetical
protein T22D1.3b protein.
Length = 462
Score = 26.6 bits (56), Expect = 8.6
Identities = 11/40 (27%), Positives = 23/40 (57%)
Frame = -1
Query: 302 VVDGWSNFASEEIDLELDLTSPIVIAAPMSLTMMLSARET 183
++ G+ NF ++ LE ++T + I AP+ + M + E+
Sbjct: 39 ILPGFINFGVHDVSLETNITKDLKIKAPLVSSPMDTVTES 78
>AF039052-6|AAF98635.2| 534|Caenorhabditis elegans Hypothetical
protein T22D1.3a protein.
Length = 534
Score = 26.6 bits (56), Expect = 8.6
Identities = 11/40 (27%), Positives = 23/40 (57%)
Frame = -1
Query: 302 VVDGWSNFASEEIDLELDLTSPIVIAAPMSLTMMLSARET 183
++ G+ NF ++ LE ++T + I AP+ + M + E+
Sbjct: 39 ILPGFINFGVHDVSLETNITKDLKIKAPLVSSPMDTVTES 78
>AC006693-10|AAF60376.1| 578|Caenorhabditis elegans Hypothetical
protein W02H5.8 protein.
Length = 578
Score = 26.6 bits (56), Expect = 8.6
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = +1
Query: 19 VSYVGTRLNLVLAVPRVSASVGSA 90
++Y G RLN LA R +AS G+A
Sbjct: 106 INYTGDRLNFGLAAERFNASGGTA 129
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,212,959
Number of Sequences: 27780
Number of extensions: 164896
Number of successful extensions: 535
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 516
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 535
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 818426686
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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