Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--0012
(692 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_06_1721 - 39426957-39428005,39428812-39428839 97 2e-20
05_04_0255 + 19462668-19462695,19463443-19464491 96 2e-20
06_03_0718 + 23840198-23840409,23841368-23841518,23842190-238422... 91 1e-18
08_01_0142 - 1121762-1122822,1123087-1123114 87 1e-17
11_01_0448 - 3469398-3469676,3470015-3470284,3470386-3470476,347... 82 5e-16
12_01_0448 + 3537661-3538018,3538920-3539047,3539740-3539763,354... 70 2e-12
06_01_0093 - 776567-777335,777449-777747 32 0.50
05_02_0156 + 7163756-7163834,7165447-7166225 31 0.66
05_02_0152 + 7126802-7127315,7127451-7129190,7130718-7131778 30 2.0
01_01_0516 + 3778891-3779069,3779436-3779541,3780526-3780888 30 2.0
12_02_0167 - 14824241-14824279,14824385-14824423,14824509-148247... 29 4.6
06_03_1000 - 26778993-26779478 29 4.6
06_01_1052 + 8312752-8312862,8312969-8313041,8313285-8313362,831... 29 4.6
05_04_0303 - 20010761-20011756 29 4.6
03_01_0404 + 3138624-3140096 29 4.6
02_04_0621 - 24502383-24502476,24502532-24504015,24504125-245041... 29 4.6
10_08_0752 - 20315656-20315834,20315923-20315971,20316201-203162... 28 6.1
05_04_0173 + 18724367-18724476,18724570-18724651,18724750-187248... 28 6.1
05_02_0133 + 6949546-6949740,6950132-6950350,6951092-6951307 28 6.1
04_04_0920 + 29429114-29430934 28 6.1
04_01_0610 - 7997406-7998047,7998379-7998426,8000719-8001143,800... 28 6.1
02_05_0466 + 29278009-29278575 28 6.1
09_06_0192 - 21450158-21450276,21451084-21451573,21451750-214518... 28 8.1
07_03_1769 + 29377784-29377878,29377993-29378180,29378340-293784... 28 8.1
05_07_0206 - 28405109-28406671 28 8.1
04_03_0243 - 13271384-13272865,13272987-13273248,13274617-13276067 28 8.1
03_04_0243 + 19298293-19299117 28 8.1
03_02_0367 + 7834072-7834479,7834555-7834779,7834858-7835082,783... 28 8.1
02_05_0285 - 27498946-27499122,27499944-27500108,27500828-275009... 28 8.1
02_01_0210 + 1402037-1402066,1402449-1402544,1402611-1403033,140... 28 8.1
>01_06_1721 - 39426957-39428005,39428812-39428839
Length = 358
Score = 96.7 bits (230), Expect = 2e-20
Identities = 48/103 (46%), Positives = 64/103 (62%)
Frame = +2
Query: 212 GQAFAXXXXXXXXXXXXXXXQLLFSSDAVLSENISGVILFHETLYQKADDGTPLVSLLEK 391
G+ FA +LLF++ L +++SGVILF ETLYQK DG P V +L++
Sbjct: 37 GKRFASINVENVEENRRSLRELLFTTPGAL-QHLSGVILFEETLYQKTKDGKPFVDVLKE 95
Query: 392 KGIIPGIKVDKGVVPLFGSEDECTTQGLDDLAQRCAQYKRTAA 520
G++PGIKVDKG V + G+ E TTQG DDL +RCA+Y A
Sbjct: 96 GGVLPGIKVDKGTVEVAGTNKETTTQGHDDLGKRCAKYYEAGA 138
Score = 81.4 bits (192), Expect = 6e-16
Identities = 38/60 (63%), Positives = 42/60 (70%)
Frame = +1
Query: 508 EDGCHFAKWRCVLKIGRNTPSYQAIQENANVLARYASICQSQRIVPIVEPEVLPDGEHDL 687
E G FAKWR VLKIG N PS +I NA LARYA ICQ +VPIVEPE+L DG HD+
Sbjct: 135 EAGARFAKWRAVLKIGPNEPSQLSIDLNAQGLARYAIICQENGLVPIVEPEILVDGSHDI 194
Score = 53.6 bits (123), Expect = 1e-07
Identities = 27/42 (64%), Positives = 30/42 (71%)
Frame = +3
Query: 129 QEELKKIAQAIVAPAKGILAADESTGTMGKRLQDIGVENTEE 254
++EL K A I P KGILAADESTGT+GKR I VEN EE
Sbjct: 9 KDELIKNAAYIGTPGKGILAADESTGTIGKRFASINVENVEE 50
>05_04_0255 + 19462668-19462695,19463443-19464491
Length = 358
Score = 96.3 bits (229), Expect = 2e-20
Identities = 48/103 (46%), Positives = 63/103 (61%)
Frame = +2
Query: 212 GQAFAXXXXXXXXXXXXXXXQLLFSSDAVLSENISGVILFHETLYQKADDGTPLVSLLEK 391
G+ FA +LLF + L + +SGVILF ETLYQK DG P V +L++
Sbjct: 37 GKRFASINVENVEENRRSLRELLFCTPGAL-QYLSGVILFEETLYQKTKDGKPFVDVLKE 95
Query: 392 KGIIPGIKVDKGVVPLFGSEDECTTQGLDDLAQRCAQYKRTAA 520
G++PGIKVDKG + + G+E E TTQG DDL +RCA+Y A
Sbjct: 96 GGVLPGIKVDKGTIEVAGTEKETTTQGHDDLGKRCAKYYEAGA 138
Score = 82.2 bits (194), Expect = 4e-16
Identities = 39/60 (65%), Positives = 42/60 (70%)
Frame = +1
Query: 508 EDGCHFAKWRCVLKIGRNTPSYQAIQENANVLARYASICQSQRIVPIVEPEVLPDGEHDL 687
E G FAKWR VLKIG N PS AI NA LARYA ICQ +VPIVEPE+L DG HD+
Sbjct: 135 EAGARFAKWRAVLKIGPNEPSQLAIDLNAQGLARYAIICQENGLVPIVEPEILVDGPHDI 194
Score = 53.6 bits (123), Expect = 1e-07
Identities = 27/42 (64%), Positives = 30/42 (71%)
Frame = +3
Query: 129 QEELKKIAQAIVAPAKGILAADESTGTMGKRLQDIGVENTEE 254
++EL K A I P KGILAADESTGT+GKR I VEN EE
Sbjct: 9 KDELIKNAAYIGTPGKGILAADESTGTIGKRFASINVENVEE 50
>06_03_0718 +
23840198-23840409,23841368-23841518,23842190-23842294,
23843476-23843608,23844164-23844849,23844937-23845299
Length = 549
Score = 90.6 bits (215), Expect = 1e-18
Identities = 47/106 (44%), Positives = 64/106 (60%)
Frame = +2
Query: 272 QLLFSSDAVLSENISGVILFHETLYQKADDGTPLVSLLEKKGIIPGIKVDKGVVPLFGSE 451
+LLF++ + +SGVILF ETLYQ GTP V +L+ G++PGIKVDKG V + G+
Sbjct: 248 ELLFTTPGAF-QYLSGVILFEETLYQSTAAGTPFVDVLKAGGVVPGIKVDKGTVDIAGTN 306
Query: 452 DECTTQGLDDLAQRCAQYKRTAATSPSGVAC*RLAATPPRTKLSRK 589
E TTQGLD L RCA+Y A A ++ A ++L+ K
Sbjct: 307 GETTTQGLDSLGARCAKYYEAGARFAKWRAVLKIGAAGEPSELAVK 352
Score = 77.8 bits (183), Expect = 8e-15
Identities = 37/61 (60%), Positives = 43/61 (70%), Gaps = 1/61 (1%)
Frame = +1
Query: 508 EDGCHFAKWRCVLKIGR-NTPSYQAIQENANVLARYASICQSQRIVPIVEPEVLPDGEHD 684
E G FAKWR VLKIG PS A+++NA LARYA ICQ +VPIVEPE+L DG HD
Sbjct: 326 EAGARFAKWRAVLKIGAAGEPSELAVKQNAEGLARYALICQENGLVPIVEPEILTDGAHD 385
Query: 685 L 687
+
Sbjct: 386 I 386
Score = 54.8 bits (126), Expect = 6e-08
Identities = 27/39 (69%), Positives = 29/39 (74%)
Frame = +3
Query: 135 ELKKIAQAIVAPAKGILAADESTGTMGKRLQDIGVENTE 251
EL K A+ I P KGILAADESTGT+GKRL I VEN E
Sbjct: 202 ELIKTAKYIATPGKGILAADESTGTIGKRLASINVENVE 240
>08_01_0142 - 1121762-1122822,1123087-1123114
Length = 362
Score = 87.0 bits (206), Expect = 1e-17
Identities = 43/83 (51%), Positives = 55/83 (66%)
Frame = +2
Query: 272 QLLFSSDAVLSENISGVILFHETLYQKADDGTPLVSLLEKKGIIPGIKVDKGVVPLFGSE 451
+LLF++ L + +SGVILF ETLYQ DGTP V +L G++ GIKVDKG V L G++
Sbjct: 57 ELLFTAPGAL-DCLSGVILFEETLYQSTRDGTPFVDVLAAAGVLAGIKVDKGTVELAGTD 115
Query: 452 DECTTQGLDDLAQRCAQYKRTAA 520
E TTQG D L +RC +Y A
Sbjct: 116 RETTTQGHDGLGERCRRYYAAGA 138
Score = 74.5 bits (175), Expect = 7e-14
Identities = 36/60 (60%), Positives = 41/60 (68%), Gaps = 2/60 (3%)
Frame = +1
Query: 514 GCHFAKWRCVLKIGR--NTPSYQAIQENANVLARYASICQSQRIVPIVEPEVLPDGEHDL 687
G FAKWR VL IGR + PS A+ NA LARYA ICQ +VPIVEPE+L DGEH +
Sbjct: 137 GARFAKWRAVLSIGRASSRPSQLAVDANAQGLARYAIICQENGLVPIVEPEILVDGEHGI 196
Score = 56.4 bits (130), Expect = 2e-08
Identities = 28/42 (66%), Positives = 32/42 (76%)
Frame = +3
Query: 129 QEELKKIAQAIVAPAKGILAADESTGTMGKRLQDIGVENTEE 254
++EL + A I P KGILAADESTGT+GKRL IGVEN EE
Sbjct: 9 KDELIRNAAYIGTPGKGILAADESTGTIGKRLASIGVENVEE 50
>11_01_0448 -
3469398-3469676,3470015-3470284,3470386-3470476,
3470581-3470690,3470867-3471136,3471768-3471914
Length = 388
Score = 81.8 bits (193), Expect = 5e-16
Identities = 41/74 (55%), Positives = 50/74 (67%)
Frame = +2
Query: 299 LSENISGVILFHETLYQKADDGTPLVSLLEKKGIIPGIKVDKGVVPLFGSEDECTTQGLD 478
L + ISG ILF ETLYQ DG +V +L ++ I+PGIKVDKG+VPL GS +E QGLD
Sbjct: 98 LGQYISGAILFEETLYQSTVDGKKIVDILTEQKIVPGIKVDKGLVPLAGSNNESWCQGLD 157
Query: 479 DLAQRCAQYKRTAA 520
LA R A Y + A
Sbjct: 158 GLASREAAYYQQGA 171
Score = 65.3 bits (152), Expect = 4e-11
Identities = 33/60 (55%), Positives = 41/60 (68%)
Frame = +1
Query: 508 EDGCHFAKWRCVLKIGRNTPSYQAIQENANVLARYASICQSQRIVPIVEPEVLPDGEHDL 687
+ G FAKWR V+ I N PS A++E A LARYA+I Q +VPIVEPE+L DGEH +
Sbjct: 168 QQGARFAKWRTVVSIP-NGPSELAVKEAAWGLARYAAISQDNGLVPIVEPEILLDGEHGI 226
Score = 52.0 bits (119), Expect = 4e-07
Identities = 24/40 (60%), Positives = 29/40 (72%)
Frame = +3
Query: 132 EELKKIAQAIVAPAKGILAADESTGTMGKRLQDIGVENTE 251
+EL K A+ I +P +GILA DES T GKRL IG+ENTE
Sbjct: 43 DELVKTAKTIASPGRGILAMDESNATCGKRLASIGLENTE 82
>12_01_0448 +
3537661-3538018,3538920-3539047,3539740-3539763,
3542051-3542317,3542994-3543530
Length = 437
Score = 70.1 bits (164), Expect = 2e-12
Identities = 33/59 (55%), Positives = 41/59 (69%)
Frame = +2
Query: 299 LSENISGVILFHETLYQKADDGTPLVSLLEKKGIIPGIKVDKGVVPLFGSEDECTTQGL 475
L + ISG ILF ETLYQ DG +V +L ++GI+PGI VDKG+VPL GS+ E GL
Sbjct: 205 LGQYISGAILFEETLYQSTVDGRRIVDVLAEQGIVPGINVDKGLVPLAGSDPESLEDGL 263
Score = 31.1 bits (67), Expect = 0.87
Identities = 12/15 (80%), Positives = 14/15 (93%)
Frame = +1
Query: 637 IVPIVEPEVLPDGEH 681
+VPIVEPE+L DGEH
Sbjct: 263 LVPIVEPEILLDGEH 277
>06_01_0093 - 776567-777335,777449-777747
Length = 355
Score = 31.9 bits (69), Expect = 0.50
Identities = 13/25 (52%), Positives = 18/25 (72%)
Frame = -3
Query: 471 PWVVHSSSDPNSGTTPLSTLMPGMM 397
P+ HSSSDP S + PL +L+P M+
Sbjct: 67 PYSHHSSSDPMSASNPLVSLLPAMV 91
>05_02_0156 + 7163756-7163834,7165447-7166225
Length = 285
Score = 31.5 bits (68), Expect = 0.66
Identities = 16/35 (45%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Frame = +1
Query: 400 HPRHQGRQGCRPAVRIGRRM-HHPGSGRPRPALRP 501
HPRH+ R+ P R R + H G P PALRP
Sbjct: 96 HPRHRRRRAAPPRPRRLRPVGHRKAPGDPLPALRP 130
>05_02_0152 + 7126802-7127315,7127451-7129190,7130718-7131778
Length = 1104
Score = 29.9 bits (64), Expect = 2.0
Identities = 16/42 (38%), Positives = 19/42 (45%)
Frame = +1
Query: 367 PSGLPAGEEGHHPRHQGRQGCRPAVRIGRRMHHPGSGRPRPA 492
P+G PAG H P G +GC GR H G +PA
Sbjct: 915 PAGWPAGRR-HGPGEGGDRGCSRRWLRGRETHGDGGDSGQPA 955
>01_01_0516 + 3778891-3779069,3779436-3779541,3780526-3780888
Length = 215
Score = 29.9 bits (64), Expect = 2.0
Identities = 11/21 (52%), Positives = 17/21 (80%)
Frame = -2
Query: 229 SCKRLPIVPVDSSAARIPFAG 167
+C +LP+VP+D++AA FAG
Sbjct: 142 TCDKLPVVPLDAAAAHSIFAG 162
>12_02_0167 -
14824241-14824279,14824385-14824423,14824509-14824797,
14824898-14824991,14825129-14825639,14825751-14826014,
14826103-14826549,14826628-14826801,14827003-14827323
Length = 725
Score = 28.7 bits (61), Expect = 4.6
Identities = 17/47 (36%), Positives = 25/47 (53%)
Frame = +2
Query: 344 YQKADDGTPLVSLLEKKGIIPGIKVDKGVVPLFGSEDECTTQGLDDL 484
YQK DDGT + E +G+ IK + V S++ C+ + DDL
Sbjct: 143 YQKNDDGTIFMPNAEDQGLYEAIK--ELVAEQQASQEACSQRREDDL 187
>06_03_1000 - 26778993-26779478
Length = 161
Score = 28.7 bits (61), Expect = 4.6
Identities = 21/65 (32%), Positives = 26/65 (40%)
Frame = +1
Query: 214 ASVCRTSAWRTQRRPSSLSPTAIQL*RCALREHLWCDPVPRDPLPEG*RWNPSGLPAGEE 393
ASV +A + ++PT+ ALR C P PR P P G R G
Sbjct: 60 ASVSAAAAAVVESSDGCVTPTSAG---SALRPATVCPPAPRKPRPAGKRMTKRCCCGGGG 116
Query: 394 GHHPR 408
G PR
Sbjct: 117 GGRPR 121
>06_01_1052 +
8312752-8312862,8312969-8313041,8313285-8313362,
8313443-8313523,8313706-8313779,8313865-8313919,
8314031-8314079,8314222-8314359,8314455-8314536,
8315131-8315209,8315357-8315400,8315479-8315673,
8316110-8316185,8317427-8317507,8317623-8317703,
8318128-8318204,8318402-8318499,8318672-8318809,
8319397-8319478,8319564-8319642,8319885-8319931,
8320014-8320228,8320330-8320450,8320529-8320648,
8320731-8320849,8320964-8321036,8321112-8321231,
8321538-8321606,8321756-8321926,8322004-8322051,
8322192-8322333,8323244-8323341,8323684-8323828,
8323928-8324013,8324112-8324222,8324456-8324530,
8324836-8324901,8325036-8325224,8325315-8325425,
8326616-8326696,8327192-8327371
Length = 1385
Score = 28.7 bits (61), Expect = 4.6
Identities = 17/33 (51%), Positives = 21/33 (63%)
Frame = -2
Query: 223 KRLPIVPVDSSAARIPFAGATIA*AIFLSSSCS 125
K L IV +SS ARIP ++IA +FLS S S
Sbjct: 562 KDLGIVSHESSNARIPLHVSSIAHQLFLSGSAS 594
>05_04_0303 - 20010761-20011756
Length = 331
Score = 28.7 bits (61), Expect = 4.6
Identities = 24/65 (36%), Positives = 27/65 (41%), Gaps = 5/65 (7%)
Frame = +1
Query: 298 ALREHLWCD-PVPRDP---LPEG*RWNPSGLPAGEEGHHPRHQGRQGCRPAVR-IGRRMH 462
A EHL+ PVP P P G P P G HHP G PA R +G
Sbjct: 197 AATEHLFATGPVPFLPPGRAPAGGDPYPPFAPMGGHHHHPPQIGHFHHHPAARPLGHYGS 256
Query: 463 HPGSG 477
PG+G
Sbjct: 257 GPGAG 261
>03_01_0404 + 3138624-3140096
Length = 490
Score = 28.7 bits (61), Expect = 4.6
Identities = 20/61 (32%), Positives = 28/61 (45%), Gaps = 4/61 (6%)
Frame = -3
Query: 630 ALTDGGVAGENIGVFLDSLVRGGVAANLQHATPLGEVA-AVLL---YWAQRWARSSRPWV 463
A T G+AGE +GVF V G + T + A A L W R+ +S PW+
Sbjct: 172 AYTRTGMAGEGLGVFRAMFVDGVAPDAVVLTTAIAACAQAGALECGEWVHRYVEASAPWL 231
Query: 462 V 460
+
Sbjct: 232 L 232
>02_04_0621 -
24502383-24502476,24502532-24504015,24504125-24504177,
24504871-24504984,24505068-24505202,24505960-24506055,
24506692-24506827
Length = 703
Score = 28.7 bits (61), Expect = 4.6
Identities = 18/57 (31%), Positives = 23/57 (40%), Gaps = 2/57 (3%)
Frame = +1
Query: 358 RWNPSGLPAGEEGHHPRHQGRQGCRPAVRIGRRMHHPGS--GRPRPALRPVQEDGCH 522
R NP +P+G P R A + R + P S GRPR +R E H
Sbjct: 6 RRNPKSVPSGSSSMKPPRPPRGPSFQAPAVPRPLPEPSSPGGRPRKRVRFASEASSH 62
>10_08_0752 -
20315656-20315834,20315923-20315971,20316201-20316230,
20317325-20317501,20319012-20319277,20319367-20319715
Length = 349
Score = 28.3 bits (60), Expect = 6.1
Identities = 16/47 (34%), Positives = 24/47 (51%), Gaps = 4/47 (8%)
Frame = -3
Query: 594 GVFLDSLVRGGVAANLQHAT----PLGEVAAVLLYWAQRWARSSRPW 466
G L+ L+ GG ++NL+ T L + L+ WAQ A+ R W
Sbjct: 227 GFDLELLIAGGSSSNLRGYTISLVDLWTITTCLVNWAQSLAKRKRVW 273
>05_04_0173 +
18724367-18724476,18724570-18724651,18724750-18724840,
18725060-18725172,18725270-18725342,18725445-18725565,
18725665-18725782,18726609-18726748,18726824-18726881,
18727007-18727077,18727181-18727733
Length = 509
Score = 28.3 bits (60), Expect = 6.1
Identities = 23/73 (31%), Positives = 30/73 (41%), Gaps = 3/73 (4%)
Frame = +1
Query: 307 EHLWCDPVPRDPLPEG*RWNPSGLPAGEEGHH-PRHQGRQGCRPAVRIGRRM--HHPGSG 477
E+ W DP+P D P LP E H + RQ R A +R HP
Sbjct: 313 EYFWSDPLPCD---------PKSLPKYESSHEFQTKKKRQQMRQADEAAKRQKTQHP--- 360
Query: 478 RPRPALRPVQEDG 516
+P L P+Q+ G
Sbjct: 361 QPHGRLPPIQQTG 373
>05_02_0133 + 6949546-6949740,6950132-6950350,6951092-6951307
Length = 209
Score = 28.3 bits (60), Expect = 6.1
Identities = 17/55 (30%), Positives = 19/55 (34%)
Frame = +3
Query: 474 WTTSPSAAPSTRGRLPLRQVALRAEDWPQHPLVPSYPGKRQCSRPLRLHLSEPTH 638
W AA G A AE L PG+ QCS L H+ P H
Sbjct: 10 WRVGDDAAGGGGGGAVAAGAAAAAEAEHMRRLHSHAPGEHQCSSALVKHIKAPVH 64
>04_04_0920 + 29429114-29430934
Length = 606
Score = 28.3 bits (60), Expect = 6.1
Identities = 14/42 (33%), Positives = 20/42 (47%)
Frame = +1
Query: 556 RNTPSYQAIQENANVLARYASICQSQRIVPIVEPEVLPDGEH 681
R TPS ++ LA + C P++EP+ LPD H
Sbjct: 18 RRTPSQTSLWTIRRQLASFVLHCSRSCASPLLEPKNLPDEFH 59
>04_01_0610 -
7997406-7998047,7998379-7998426,8000719-8001143,
8002301-8002589
Length = 467
Score = 28.3 bits (60), Expect = 6.1
Identities = 16/38 (42%), Positives = 17/38 (44%), Gaps = 3/38 (7%)
Frame = +1
Query: 403 PRHQGRQGCRPAVRIGRRMHHPGSGRPR---PALRPVQ 507
PRH R CRP R H P RPR P RP +
Sbjct: 402 PRHPPRPWCRPHTPRPRSPHSPTHPRPRLHHPLPRPTR 439
>02_05_0466 + 29278009-29278575
Length = 188
Score = 28.3 bits (60), Expect = 6.1
Identities = 12/33 (36%), Positives = 15/33 (45%)
Frame = +1
Query: 391 EGHHPRHQGRQGCRPAVRIGRRMHHPGSGRPRP 489
+GH +HQ Q + G HHP G P P
Sbjct: 129 KGHQQQHQQHQHQHHPQQHGMPQHHPQHGMPMP 161
>09_06_0192 -
21450158-21450276,21451084-21451573,21451750-21451862,
21451992-21452376,21452461-21452529,21453165-21453264,
21454465-21454637,21454737-21454782,21454879-21454954,
21455160-21455196,21455799-21456041
Length = 616
Score = 27.9 bits (59), Expect = 8.1
Identities = 17/56 (30%), Positives = 28/56 (50%), Gaps = 3/56 (5%)
Frame = +1
Query: 247 QRRPSSLSPTAIQL*RCALREHLWCDPVPRDPLPE---G*RWNPSGLPAGEEGHHP 405
++R P+ + L + LR +P P P P+ R NP+G+ +G+EG P
Sbjct: 6 RKRKKKGRPSLLDLQKRTLRLEKLQEPPPPPPPPQPRRSTRRNPAGVDSGDEGTAP 61
>07_03_1769 +
29377784-29377878,29377993-29378180,29378340-29378472,
29378580-29378715,29378996-29379072,29379162-29380830,
29380935-29381018,29381120-29381224,29381302-29381358
Length = 847
Score = 27.9 bits (59), Expect = 8.1
Identities = 18/54 (33%), Positives = 23/54 (42%)
Frame = +3
Query: 462 PPRVWTTSPSAAPSTRGRLPLRQVALRAEDWPQHPLVPSYPGKRQCSRPLRLHL 623
PP W +S +R R LR PQ P VP++ R S P+R L
Sbjct: 530 PPMQWLSSIKVHSGSRVASSPRLKTLR----PQSPAVPNHAAGRSYSHPVRKQL 579
>05_07_0206 - 28405109-28406671
Length = 520
Score = 27.9 bits (59), Expect = 8.1
Identities = 18/51 (35%), Positives = 29/51 (56%)
Frame = +3
Query: 150 AQAIVAPAKGILAADESTGTMGKRLQDIGVENTEETVVVIANCYSALTLCS 302
A ++AP G++AA ST T+G L D+ +N + +V + C + L L S
Sbjct: 49 AYLLLAPLPGLVAAHLSTFTLGD-LADLW-QNLQYNLVSVLLCSTLLVLVS 97
>04_03_0243 - 13271384-13272865,13272987-13273248,13274617-13276067
Length = 1064
Score = 27.9 bits (59), Expect = 8.1
Identities = 19/46 (41%), Positives = 22/46 (47%), Gaps = 3/46 (6%)
Frame = +2
Query: 509 RTAATSPSGVAC*RLAAT---PPRTKLSRKTPMFSPATPPSVRANA 637
+ A + SGV RL + PP L RKTP SP T RA A
Sbjct: 849 KLADAAVSGVISLRLYTSEQSPPSGDLKRKTPTSSPPTSDRKRARA 894
>03_04_0243 + 19298293-19299117
Length = 274
Score = 27.9 bits (59), Expect = 8.1
Identities = 23/66 (34%), Positives = 31/66 (46%), Gaps = 4/66 (6%)
Frame = +1
Query: 199 PPVQWASVCRTSAW-RTQRRPSSLSPTAIQL*RCALREHLWCDPVPRDP--LP-EG*RWN 366
P WA+ ++W RT P+S SPT+ + R +L PR LP + RW
Sbjct: 181 PGAAWAAAMAPTSWSRTSAPPASSSPTSPRRARSSLTCSRVAPSTPRSATLLPRQPRRWR 240
Query: 367 PSGLPA 384
P GL A
Sbjct: 241 P-GLVA 245
>03_02_0367 +
7834072-7834479,7834555-7834779,7834858-7835082,
7835333-7836219,7836298-7836468,7836551-7836839,
7836925-7836963,7837069-7837107
Length = 760
Score = 27.9 bits (59), Expect = 8.1
Identities = 17/52 (32%), Positives = 27/52 (51%)
Frame = +2
Query: 338 TLYQKADDGTPLVSLLEKKGIIPGIKVDKGVVPLFGSEDECTTQGLDDLAQR 493
T YQK DDGT ++ E + + IK + V S++ C+ + DDL +
Sbjct: 187 TRYQKKDDGTIIMPNPEDQRVYEAIK--ELVADQQASQEACSQRREDDLLMK 236
>02_05_0285 -
27498946-27499122,27499944-27500108,27500828-27500960,
27501052-27501171,27502436-27502980
Length = 379
Score = 27.9 bits (59), Expect = 8.1
Identities = 24/62 (38%), Positives = 28/62 (45%), Gaps = 1/62 (1%)
Frame = -2
Query: 685 GRARHQVRLRARQLARCVGSDRW-RRSGREHWRFPG*LGTRGCCGQSSARNATWRSGSRP 509
G RH LR L G+ R+ RRSGR R P L Q R A W + SRP
Sbjct: 28 GGRRHGGALRRPSLR---GAARFLRRSGRRAMREPSLLVREAAADQLEERQADW-AYSRP 83
Query: 508 LV 503
+V
Sbjct: 84 VV 85
>02_01_0210 +
1402037-1402066,1402449-1402544,1402611-1403033,
1403126-1403215,1403330-1403401,1403851-1403980,
1404172-1404269
Length = 312
Score = 27.9 bits (59), Expect = 8.1
Identities = 14/36 (38%), Positives = 17/36 (47%)
Frame = +3
Query: 546 EDWPQHPLVPSYPGKRQCSRPLRLHLSEPTHRANCR 653
E +PQ P VPS P R LRL P ++ R
Sbjct: 10 EKYPQMPHVPSEPSNPTIGRSLRLRRISPPYQLIAR 45
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,248,683
Number of Sequences: 37544
Number of extensions: 555680
Number of successful extensions: 2235
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 2084
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2227
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1768474200
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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