Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--0006
(657 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z22181-7|CAA80189.2| 62|Caenorhabditis elegans Hypothetical pr... 32 0.31
Z32683-16|CAA83631.1| 1061|Caenorhabditis elegans Hypothetical p... 31 0.95
Z32680-6|CAA83602.1| 1061|Caenorhabditis elegans Hypothetical pr... 31 0.95
Z92973-6|CAI79258.1| 440|Caenorhabditis elegans Hypothetical pr... 29 3.8
U43375-7|AAA83624.1| 271|Caenorhabditis elegans Hypothetical pr... 28 5.1
U88308-3|AAB42329.2| 430|Caenorhabditis elegans Resistance to i... 27 8.9
U88167-2|AAB42225.3| 908|Caenorhabditis elegans Hypothetical pr... 27 8.9
U80847-7|AAO91744.1| 778|Caenorhabditis elegans Hypothetical pr... 27 8.9
U80847-6|AAK68190.1| 796|Caenorhabditis elegans Hypothetical pr... 27 8.9
U80847-5|AAK68189.1| 793|Caenorhabditis elegans Hypothetical pr... 27 8.9
>Z22181-7|CAA80189.2| 62|Caenorhabditis elegans Hypothetical
protein ZK632.9 protein.
Length = 62
Score = 32.3 bits (70), Expect = 0.31
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +2
Query: 122 GGKQRTKKEASEHTNHFDPSGHSRKIVTKLMNAEHNKK 235
G +RTK + EH + P G +RK+V N E +K
Sbjct: 23 GSGKRTKSDRVEHKHASQPGGDTRKVVQTASNGEAKRK 60
>Z32683-16|CAA83631.1| 1061|Caenorhabditis elegans Hypothetical
protein C28A5.6 protein.
Length = 1061
Score = 30.7 bits (66), Expect = 0.95
Identities = 20/82 (24%), Positives = 36/82 (43%), Gaps = 1/82 (1%)
Frame = +2
Query: 53 SEAFFD-EYDYYNFDHDKHIFTGHGGKQRTKKEASEHTNHFDPSGHSRKIVTKLMNAEHN 229
S+ F D + D + H+ + G+ KKE+ + T+ +PS T+ N E +
Sbjct: 139 SDCFSDKDLDAVSASSSSHLISEEDGEVGEKKESEQPTDMVEPSSAPTTEETETENEEED 198
Query: 230 KKTSNTKH*WIADQ*TTMASRR 295
K K A++ +A +R
Sbjct: 199 DKEKTDKEKLDAEKEKALAEKR 220
>Z32680-6|CAA83602.1| 1061|Caenorhabditis elegans Hypothetical
protein C28A5.6 protein.
Length = 1061
Score = 30.7 bits (66), Expect = 0.95
Identities = 20/82 (24%), Positives = 36/82 (43%), Gaps = 1/82 (1%)
Frame = +2
Query: 53 SEAFFD-EYDYYNFDHDKHIFTGHGGKQRTKKEASEHTNHFDPSGHSRKIVTKLMNAEHN 229
S+ F D + D + H+ + G+ KKE+ + T+ +PS T+ N E +
Sbjct: 139 SDCFSDKDLDAVSASSSSHLISEEDGEVGEKKESEQPTDMVEPSSAPTTEETETENEEED 198
Query: 230 KKTSNTKH*WIADQ*TTMASRR 295
K K A++ +A +R
Sbjct: 199 DKEKTDKEKLDAEKEKALAEKR 220
>Z92973-6|CAI79258.1| 440|Caenorhabditis elegans Hypothetical
protein Y6G8.5 protein.
Length = 440
Score = 28.7 bits (61), Expect = 3.8
Identities = 19/60 (31%), Positives = 26/60 (43%), Gaps = 6/60 (10%)
Frame = +1
Query: 394 FFCS--HKISTSPTHRG----CDLERDNATNEPSSKSVYFGRNTVQCLISNNGLVSPELL 555
FFC H + T P G D ++ N P+ S F N++QCL N +P L
Sbjct: 311 FFCGYQHSVITYPFFTGKVADADECKNRCLNNPACMSSEFRYNSMQCLNFNTASANPYYL 370
>U43375-7|AAA83624.1| 271|Caenorhabditis elegans Hypothetical
protein K09C4.4 protein.
Length = 271
Score = 28.3 bits (60), Expect = 5.1
Identities = 16/73 (21%), Positives = 34/73 (46%), Gaps = 2/73 (2%)
Frame = -1
Query: 363 EHPPEHSSGIRNSVLLSFGNSIVLLLAIVVY*SAIHQCLVFEVFLLCSAFMSFVTIFLEC 184
E P+ + G + L+ + +++ + + + + + VF L + SF+ + C
Sbjct: 104 ECAPDKNRGFACTSLVVLVGIVRMIMLPIASPAVLGKADTWFVFPLAALISSFLVLIWVC 163
Query: 183 --PDGSKWLVCSD 151
P+ KWLVC +
Sbjct: 164 RLPESPKWLVCQN 176
>U88308-3|AAB42329.2| 430|Caenorhabditis elegans Resistance to
inhibitors of cholinesteraseprotein 19 protein.
Length = 430
Score = 27.5 bits (58), Expect = 8.9
Identities = 13/50 (26%), Positives = 22/50 (44%)
Frame = +2
Query: 74 YDYYNFDHDKHIFTGHGGKQRTKKEASEHTNHFDPSGHSRKIVTKLMNAE 223
Y+ Y+F+ H+ TG ++ K E E P G+ ++ L E
Sbjct: 265 YNNYDFEILSHLATGTKPERERKSEKEESAKTSQPRGNEEELKNLLFGRE 314
>U88167-2|AAB42225.3| 908|Caenorhabditis elegans Hypothetical
protein D2092.5 protein.
Length = 908
Score = 27.5 bits (58), Expect = 8.9
Identities = 15/31 (48%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
Frame = +1
Query: 169 LRSV-RAFEKDRHETHERRAQQEDFKHQTLM 258
+RS+ R E R E RR+Q+EDFK Q M
Sbjct: 523 IRSMSRELESLRSEISSRRSQEEDFKLQVSM 553
>U80847-7|AAO91744.1| 778|Caenorhabditis elegans Hypothetical
protein C17H11.6c protein.
Length = 778
Score = 27.5 bits (58), Expect = 8.9
Identities = 10/17 (58%), Positives = 14/17 (82%)
Frame = +1
Query: 409 KISTSPTHRGCDLERDN 459
K+S+S HRGC +ERD+
Sbjct: 594 KLSSSSIHRGCVIERDD 610
>U80847-6|AAK68190.1| 796|Caenorhabditis elegans Hypothetical
protein C17H11.6b protein.
Length = 796
Score = 27.5 bits (58), Expect = 8.9
Identities = 10/17 (58%), Positives = 14/17 (82%)
Frame = +1
Query: 409 KISTSPTHRGCDLERDN 459
K+S+S HRGC +ERD+
Sbjct: 597 KLSSSSIHRGCVIERDD 613
>U80847-5|AAK68189.1| 793|Caenorhabditis elegans Hypothetical
protein C17H11.6a protein.
Length = 793
Score = 27.5 bits (58), Expect = 8.9
Identities = 10/17 (58%), Positives = 14/17 (82%)
Frame = +1
Query: 409 KISTSPTHRGCDLERDN 459
K+S+S HRGC +ERD+
Sbjct: 594 KLSSSSIHRGCVIERDD 610
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,698,392
Number of Sequences: 27780
Number of extensions: 306408
Number of successful extensions: 842
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 803
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 842
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1465835342
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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