Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0005
         (804 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF592536-1|ABQ95982.1|  598|Tribolium castaneum beta-N-acetylglu...    23   2.8  
AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    23   2.8  
DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.    21   8.7  
AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory recept...    21   8.7  

>EF592536-1|ABQ95982.1|  598|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG1 protein.
          Length = 598

 Score = 23.0 bits (47), Expect = 2.8
 Identities = 10/20 (50%), Positives = 14/20 (70%)
 Frame = -2

Query: 377 LLFLALYSNTFSLNGRQKYK 318
           LLFLAL  N  +LNG  +++
Sbjct: 9   LLFLALLKNISALNGAWRWE 28


>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 23.0 bits (47), Expect = 2.8
 Identities = 12/38 (31%), Positives = 22/38 (57%)
 Frame = +1

Query: 76  CREVLNPFVRW*KSSVCLISRKNRIANVNMSGFWP*FP 189
           CR+ +NP++ +   SV L+ R +   N+++  F   FP
Sbjct: 114 CRDRVNPYLFYYAFSVALLHRPD-TQNLDLPSFIHVFP 150


>DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.
          Length = 314

 Score = 21.4 bits (43), Expect = 8.7
 Identities = 7/19 (36%), Positives = 13/19 (68%)
 Frame = +3

Query: 600 KVQKNNSGENVTCNGSVPH 656
           +++ N   EN+TC  +VP+
Sbjct: 234 QLEVNERKENLTCQPAVPY 252


>AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory receptor
           candidate 40 protein.
          Length = 373

 Score = 21.4 bits (43), Expect = 8.7
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = +2

Query: 719 SHCETVSSKDEHFFDYRWTWVKT 787
           S CE  S+  EHFF  ++ ++ T
Sbjct: 170 SKCENNSTGVEHFFKKQFHYIFT 192


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 188,428
Number of Sequences: 336
Number of extensions: 4191
Number of successful extensions: 7
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21895259
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)