Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= mg--0005
         (804 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY752894-1|AAV30068.1|  156|Anopheles gambiae peroxidase 2 protein.    27   0.51 
AJ001042-1|CAA04496.1|  395|Anopheles gambiae putative gram nega...    26   1.2  
AF081533-1|AAD29854.1|  395|Anopheles gambiae putative gram nega...    26   1.2  
AY146752-1|AAO12067.1|  277|Anopheles gambiae odorant-binding pr...    25   2.1  
AY146751-1|AAO12066.1|  277|Anopheles gambiae odorant-binding pr...    25   2.1  
AY705405-1|AAU12514.1|  519|Anopheles gambiae nicotinic acetylch...    25   2.7  
AY705396-1|AAU12505.1|  710|Anopheles gambiae nicotinic acetylch...    23   8.3  

>AY752894-1|AAV30068.1|  156|Anopheles gambiae peroxidase 2 protein.
          Length = 156

 Score = 27.5 bits (58), Expect = 0.51
 Identities = 17/33 (51%), Positives = 20/33 (60%)
 Frame = -2

Query: 233 RYLFPTVIYLRPFYAGN*GQNPDILTFAILFLR 135
           R L P  +YL      N  QNP +L+FAILFLR
Sbjct: 25  RMLSPERLYLLGDPRTN--QNPALLSFAILFLR 55


>AJ001042-1|CAA04496.1|  395|Anopheles gambiae putative gram
           negative bacteria bindingprotein protein.
          Length = 395

 Score = 26.2 bits (55), Expect = 1.2
 Identities = 16/45 (35%), Positives = 21/45 (46%)
 Frame = +3

Query: 642 GSVPHNTEPTWVHEIFQGTLTSETRCLTVRRSAVKMSISLITGGR 776
           GS+   T   WV  +++ T T+ T      RS    S SLI  GR
Sbjct: 11  GSLLLATVGDWVEAVYESTSTASTAQSECVRSVTTASGSLIDRGR 55


>AF081533-1|AAD29854.1|  395|Anopheles gambiae putative gram
           negative bacteria bindingprotein protein.
          Length = 395

 Score = 26.2 bits (55), Expect = 1.2
 Identities = 16/45 (35%), Positives = 21/45 (46%)
 Frame = +3

Query: 642 GSVPHNTEPTWVHEIFQGTLTSETRCLTVRRSAVKMSISLITGGR 776
           GS+   T   WV  +++ T T+ T      RS    S SLI  GR
Sbjct: 11  GSLLLATVGDWVEAVYESTSTASTAQSECVRSVTTASGSLIDRGR 55


>AY146752-1|AAO12067.1|  277|Anopheles gambiae odorant-binding
           protein AgamOBP35 protein.
          Length = 277

 Score = 25.4 bits (53), Expect = 2.1
 Identities = 10/17 (58%), Positives = 11/17 (64%)
 Frame = +1

Query: 649 CLTTLNRLGCTKYSKEH 699
           CLT LN+L C K   EH
Sbjct: 229 CLTNLNKLACHKTRCEH 245


>AY146751-1|AAO12066.1|  277|Anopheles gambiae odorant-binding
           protein AgamOBP36 protein.
          Length = 277

 Score = 25.4 bits (53), Expect = 2.1
 Identities = 10/17 (58%), Positives = 11/17 (64%)
 Frame = +1

Query: 649 CLTTLNRLGCTKYSKEH 699
           CLT LN+L C K   EH
Sbjct: 229 CLTNLNKLACHKTRCEH 245


>AY705405-1|AAU12514.1|  519|Anopheles gambiae nicotinic
           acetylcholine receptor subunitbeta 1 protein.
          Length = 519

 Score = 25.0 bits (52), Expect = 2.7
 Identities = 11/28 (39%), Positives = 18/28 (64%)
 Frame = -3

Query: 769 PVIKEMLIFTADRLTVRHLVSLVNVPWN 686
           P+I + L+FT    TV  LV+++ + WN
Sbjct: 293 PLIAKYLLFTFIMNTVSILVTVIIINWN 320


>AY705396-1|AAU12505.1|  710|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 3 protein.
          Length = 710

 Score = 23.4 bits (48), Expect = 8.3
 Identities = 10/19 (52%), Positives = 12/19 (63%)
 Frame = -1

Query: 552 LLGSSGIHGHLVACNVKFL 496
           LL ++G  GHL  CN  FL
Sbjct: 528 LLKTAGATGHLSCCNSLFL 546


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 817,776
Number of Sequences: 2352
Number of extensions: 16871
Number of successful extensions: 87
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 86
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 87
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 84823812
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)