Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= mg--0005
(804 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z29095-11|CAB54286.2| 426|Caenorhabditis elegans Hypothetical p... 134 9e-32
Z29095-12|CAB54287.2| 414|Caenorhabditis elegans Hypothetical p... 97 1e-20
Z79601-1|CAB01885.2| 716|Caenorhabditis elegans Hypothetical pr... 43 2e-04
Z92835-4|CAE54910.1| 1135|Caenorhabditis elegans Hypothetical pr... 42 7e-04
Z92835-3|CAB07397.1| 1130|Caenorhabditis elegans Hypothetical pr... 42 7e-04
Z92835-2|CAB07396.1| 1133|Caenorhabditis elegans Hypothetical pr... 42 7e-04
Z47812-1|CAA87795.2| 1326|Caenorhabditis elegans Hypothetical pr... 37 0.015
U88180-7|AAB42297.2| 789|Caenorhabditis elegans Hypothetical pr... 37 0.019
Z81072-15|CAB03026.2| 1262|Caenorhabditis elegans Hypothetical p... 36 0.045
Z81048-10|CAB02845.2| 1262|Caenorhabditis elegans Hypothetical p... 36 0.045
AL132902-8|CAC14423.2| 699|Caenorhabditis elegans Hypothetical ... 36 0.045
U50193-6|AAL32262.1| 1175|Caenorhabditis elegans Cytokinesis def... 35 0.078
U50193-5|AAL32263.1| 1178|Caenorhabditis elegans Cytokinesis def... 35 0.078
AF469173-1|AAL79016.1| 1175|Caenorhabditis elegans ubiquitin c-t... 35 0.078
AF067616-2|AAC19188.2| 551|Caenorhabditis elegans Deubiquitylat... 34 0.14
AC091125-6|AAK27886.3| 474|Caenorhabditis elegans Hypothetical ... 34 0.14
Z74033-4|CAA98471.2| 822|Caenorhabditis elegans Hypothetical pr... 33 0.18
AB095019-1|BAC22611.1| 822|Caenorhabditis elegans ubiquitin-spe... 33 0.18
Z83236-11|CAB05785.1| 489|Caenorhabditis elegans Hypothetical p... 32 0.42
Z81468-3|CAB03876.1| 489|Caenorhabditis elegans Hypothetical pr... 32 0.42
U97012-5|AAK39149.1| 515|Caenorhabditis elegans Hypothetical pr... 32 0.42
U32223-1|AAA74956.1| 489|Caenorhabditis elegans tRNA-guanine tr... 32 0.42
Z66511-5|CAA91317.1| 1095|Caenorhabditis elegans Hypothetical pr... 32 0.55
AF100662-1|AAC68977.1| 900|Caenorhabditis elegans Hypothetical ... 32 0.55
U41034-5|AAA82381.1| 567|Caenorhabditis elegans Hypothetical pr... 30 2.2
AL117206-11|CAB60453.3| 1237|Caenorhabditis elegans Hypothetical... 30 2.2
AL032631-11|CAB63341.1| 975|Caenorhabditis elegans Hypothetical... 30 2.2
AC006730-8|AAO91687.1| 154|Caenorhabditis elegans Hypothetical ... 29 2.9
AL132898-1|CAC14405.1| 357|Caenorhabditis elegans Hypothetical ... 29 5.1
AF026212-1|AAF99971.1| 807|Caenorhabditis elegans Hypothetical ... 29 5.1
AF016681-19|AAO91735.1| 204|Caenorhabditis elegans Hypothetical... 29 5.1
Z73974-4|CAA98269.1| 481|Caenorhabditis elegans Hypothetical pr... 28 6.8
AY147932-1|AAN39842.1| 481|Caenorhabditis elegans UDP-glucose d... 28 6.8
AF100662-2|AAC68976.1| 478|Caenorhabditis elegans Hypothetical ... 28 6.8
Z35663-14|CAA84733.1| 805|Caenorhabditis elegans Hypothetical p... 28 9.0
>Z29095-11|CAB54286.2| 426|Caenorhabditis elegans Hypothetical
protein R10E11.3a protein.
Length = 426
Score = 134 bits (323), Expect = 9e-32
Identities = 60/87 (68%), Positives = 75/87 (86%), Gaps = 3/87 (3%)
Frame = +1
Query: 256 EHYFGLVNFGNTCYSNSVLQALYFCRPFREKVLEYK---AKNKRTKETLLTCLADLFYSI 426
EHY+GLVNFGNTCY NSV+QAL+FCRPFREKVL YK K+ +K+ L+TCLADLF+SI
Sbjct: 24 EHYYGLVNFGNTCYCNSVIQALFFCRPFREKVLNYKQTLKKSGASKDNLVTCLADLFHSI 83
Query: 427 ATQKKKVGSIAPKKFIARLRKEKEEFD 507
A+QK++VG+IAPK+FI +L+KE E FD
Sbjct: 84 ASQKRRVGTIAPKRFITKLKKENELFD 110
Score = 55.6 bits (128), Expect = 4e-08
Identities = 40/103 (38%), Positives = 53/103 (51%), Gaps = 30/103 (29%)
Frame = +3
Query: 507 HYMQQDAHEFLNFLINHINEIIL----AERNQS----TLK-------------------- 602
+YMQQDAHEF N+LIN I+E ++ AER ++ TLK
Sbjct: 111 NYMQQDAHEFFNYLINTISETLIQEKIAEREKASRHGTLKKGNVTVNLAPATAGLPRSDE 170
Query: 603 --VQKNNSGENVTCNGSVPHNTEPTWVHEIFQGTLTSETRCLT 725
+ N G V N + + TW+HEIFQG LT+ETRCL+
Sbjct: 171 KGTSERNGGITVEGNEFLNKSDTTTWIHEIFQGILTNETRCLS 213
Score = 29.5 bits (63), Expect = 2.9
Identities = 12/17 (70%), Positives = 14/17 (82%)
Frame = +1
Query: 754 FL*LQVDVGQNTSITHC 804
FL L +DV QNTSI+HC
Sbjct: 224 FLDLSIDVEQNTSISHC 240
>Z29095-12|CAB54287.2| 414|Caenorhabditis elegans Hypothetical
protein R10E11.3b protein.
Length = 414
Score = 97.1 bits (231), Expect = 1e-20
Identities = 50/87 (57%), Positives = 64/87 (73%), Gaps = 3/87 (3%)
Frame = +1
Query: 256 EHYFGLVNFGNTCYSNSVLQALYFCRPFREKVLEYKAKNKRT---KETLLTCLADLFYSI 426
EHY+GLVN AL+FCRPFREKVL YK K++ K+ L+TCLADLF+SI
Sbjct: 24 EHYYGLVN------------ALFFCRPFREKVLNYKQTLKKSGASKDNLVTCLADLFHSI 71
Query: 427 ATQKKKVGSIAPKKFIARLRKEKEEFD 507
A+QK++VG+IAPK+FI +L+KE E FD
Sbjct: 72 ASQKRRVGTIAPKRFITKLKKENELFD 98
Score = 55.6 bits (128), Expect = 4e-08
Identities = 40/103 (38%), Positives = 53/103 (51%), Gaps = 30/103 (29%)
Frame = +3
Query: 507 HYMQQDAHEFLNFLINHINEIIL----AERNQS----TLK-------------------- 602
+YMQQDAHEF N+LIN I+E ++ AER ++ TLK
Sbjct: 99 NYMQQDAHEFFNYLINTISETLIQEKIAEREKASRHGTLKKGNVTVNLAPATAGLPRSDE 158
Query: 603 --VQKNNSGENVTCNGSVPHNTEPTWVHEIFQGTLTSETRCLT 725
+ N G V N + + TW+HEIFQG LT+ETRCL+
Sbjct: 159 KGTSERNGGITVEGNEFLNKSDTTTWIHEIFQGILTNETRCLS 201
Score = 29.5 bits (63), Expect = 2.9
Identities = 12/17 (70%), Positives = 14/17 (82%)
Frame = +1
Query: 754 FL*LQVDVGQNTSITHC 804
FL L +DV QNTSI+HC
Sbjct: 212 FLDLSIDVEQNTSISHC 228
>Z79601-1|CAB01885.2| 716|Caenorhabditis elegans Hypothetical
protein K09A9.4 protein.
Length = 716
Score = 43.2 bits (97), Expect = 2e-04
Identities = 17/30 (56%), Positives = 22/30 (73%)
Frame = +1
Query: 268 GLVNFGNTCYSNSVLQALYFCRPFREKVLE 357
G +NFGNTCY N+VLQ L C PF + ++E
Sbjct: 183 GYLNFGNTCYMNAVLQLLGHCSPFTQYLIE 212
>Z92835-4|CAE54910.1| 1135|Caenorhabditis elegans Hypothetical
protein H19N07.2c protein.
Length = 1135
Score = 41.5 bits (93), Expect = 7e-04
Identities = 19/60 (31%), Positives = 29/60 (48%)
Frame = +1
Query: 268 GLVNFGNTCYSNSVLQALYFCRPFREKVLEYKAKNKRTKETLLTCLADLFYSIATQKKKV 447
GL N G TCY NS+LQ+ YF FR V + + ++ + +FY + + V
Sbjct: 194 GLRNQGATCYMNSILQSFYFTTGFRRAVYNMDVGTEPNESNIVLAMQRVFYELQMASEAV 253
>Z92835-3|CAB07397.1| 1130|Caenorhabditis elegans Hypothetical
protein H19N07.2b protein.
Length = 1130
Score = 41.5 bits (93), Expect = 7e-04
Identities = 19/60 (31%), Positives = 29/60 (48%)
Frame = +1
Query: 268 GLVNFGNTCYSNSVLQALYFCRPFREKVLEYKAKNKRTKETLLTCLADLFYSIATQKKKV 447
GL N G TCY NS+LQ+ YF FR V + + ++ + +FY + + V
Sbjct: 194 GLRNQGATCYMNSILQSFYFTTGFRRAVYNMDVGTEPNESNIVLAMQRVFYELQMASEAV 253
>Z92835-2|CAB07396.1| 1133|Caenorhabditis elegans Hypothetical
protein H19N07.2a protein.
Length = 1133
Score = 41.5 bits (93), Expect = 7e-04
Identities = 19/60 (31%), Positives = 29/60 (48%)
Frame = +1
Query: 268 GLVNFGNTCYSNSVLQALYFCRPFREKVLEYKAKNKRTKETLLTCLADLFYSIATQKKKV 447
GL N G TCY NS+LQ+ YF FR V + + ++ + +FY + + V
Sbjct: 194 GLRNQGATCYMNSILQSFYFTTGFRRAVYNMDVGTEPNESNIVLAMQRVFYELQMASEAV 253
>Z47812-1|CAA87795.2| 1326|Caenorhabditis elegans Hypothetical
protein T05H10.1 protein.
Length = 1326
Score = 37.1 bits (82), Expect = 0.015
Identities = 18/44 (40%), Positives = 27/44 (61%), Gaps = 3/44 (6%)
Frame = +1
Query: 241 AVPTYEH---YFGLVNFGNTCYSNSVLQALYFCRPFREKVLEYK 363
A+P E+ Y GLVN TCY NS++Q+LY FR + +++
Sbjct: 77 AIPVDENGHRYVGLVNQAMTCYLNSLVQSLYMTPEFRNAMYDWE 120
>U88180-7|AAB42297.2| 789|Caenorhabditis elegans Hypothetical
protein T27A3.2 protein.
Length = 789
Score = 36.7 bits (81), Expect = 0.019
Identities = 21/54 (38%), Positives = 30/54 (55%)
Frame = +1
Query: 262 YFGLVNFGNTCYSNSVLQALYFCRPFREKVLEYKAKNKRTKETLLTCLADLFYS 423
Y GLVN G++CY NSVLQAL F+ + ++ ETL+ C D ++
Sbjct: 318 YTGLVNTGSSCYMNSVLQALVTVDSFQTRY------GEQGLETLVNCPLDKLHN 365
>Z81072-15|CAB03026.2| 1262|Caenorhabditis elegans Hypothetical
protein F30A10.10 protein.
Length = 1262
Score = 35.5 bits (78), Expect = 0.045
Identities = 18/63 (28%), Positives = 31/63 (49%), Gaps = 8/63 (12%)
Frame = +1
Query: 268 GLVNFGNTCYSNSVLQALYFCRPFREKVLEYKAKN--------KRTKETLLTCLADLFYS 423
GL+N GN CY NS LQ + FR+ + +++ + + + L D+FY+
Sbjct: 109 GLINGGNFCYVNSFLQVWFNVPEFRQLIYDFRPSENFVPPEAPRMNVQATMLALQDIFYT 168
Query: 424 IAT 432
+ T
Sbjct: 169 LQT 171
>Z81048-10|CAB02845.2| 1262|Caenorhabditis elegans Hypothetical
protein F30A10.10 protein.
Length = 1262
Score = 35.5 bits (78), Expect = 0.045
Identities = 18/63 (28%), Positives = 31/63 (49%), Gaps = 8/63 (12%)
Frame = +1
Query: 268 GLVNFGNTCYSNSVLQALYFCRPFREKVLEYKAKN--------KRTKETLLTCLADLFYS 423
GL+N GN CY NS LQ + FR+ + +++ + + + L D+FY+
Sbjct: 109 GLINGGNFCYVNSFLQVWFNVPEFRQLIYDFRPSENFVPPEAPRMNVQATMLALQDIFYT 168
Query: 424 IAT 432
+ T
Sbjct: 169 LQT 171
>AL132902-8|CAC14423.2| 699|Caenorhabditis elegans Hypothetical
protein Y71A12B.9 protein.
Length = 699
Score = 35.5 bits (78), Expect = 0.045
Identities = 15/29 (51%), Positives = 20/29 (68%)
Frame = +1
Query: 268 GLVNFGNTCYSNSVLQALYFCRPFREKVL 354
G+ N GNTC+ N+VLQAL FRE ++
Sbjct: 379 GMRNVGNTCFMNAVLQALASISEFREYIM 407
>U50193-6|AAL32262.1| 1175|Caenorhabditis elegans Cytokinesis defect
protein 3, isoforma protein.
Length = 1175
Score = 34.7 bits (76), Expect = 0.078
Identities = 28/88 (31%), Positives = 40/88 (45%), Gaps = 8/88 (9%)
Frame = +1
Query: 268 GLVNFGNTCYSNSVLQALYFCRPFREKVLE------YKAKNKRTKETLLTCL--ADLFYS 423
GLVN+GN CY N+ +Q L P + L+ K N R + T + A L
Sbjct: 568 GLVNYGNFCYRNAGIQCLARVSPLTQYFLDEDNLDAIKRGNLRRGDAAETTIEYAKLLRE 627
Query: 424 IATQKKKVGSIAPKKFIARLRKEKEEFD 507
+ KKK +IAP F +R + F+
Sbjct: 628 MWAAKKK--NIAPNDFNDAIRLSSDMFE 653
>U50193-5|AAL32263.1| 1178|Caenorhabditis elegans Cytokinesis defect
protein 3, isoformb protein.
Length = 1178
Score = 34.7 bits (76), Expect = 0.078
Identities = 28/88 (31%), Positives = 40/88 (45%), Gaps = 8/88 (9%)
Frame = +1
Query: 268 GLVNFGNTCYSNSVLQALYFCRPFREKVLE------YKAKNKRTKETLLTCL--ADLFYS 423
GLVN+GN CY N+ +Q L P + L+ K N R + T + A L
Sbjct: 571 GLVNYGNFCYRNAGIQCLARVSPLTQYFLDEDNLDAIKRGNLRRGDAAETTIEYAKLLRE 630
Query: 424 IATQKKKVGSIAPKKFIARLRKEKEEFD 507
+ KKK +IAP F +R + F+
Sbjct: 631 MWAAKKK--NIAPNDFNDAIRLSSDMFE 656
>AF469173-1|AAL79016.1| 1175|Caenorhabditis elegans ubiquitin
c-terminal hydrolase protein.
Length = 1175
Score = 34.7 bits (76), Expect = 0.078
Identities = 28/88 (31%), Positives = 40/88 (45%), Gaps = 8/88 (9%)
Frame = +1
Query: 268 GLVNFGNTCYSNSVLQALYFCRPFREKVLE------YKAKNKRTKETLLTCL--ADLFYS 423
GLVN+GN CY N+ +Q L P + L+ K N R + T + A L
Sbjct: 568 GLVNYGNFCYRNAGIQCLARVSPLTQYFLDEDNLDAIKRGNLRRGDAAETTIEYAKLLRE 627
Query: 424 IATQKKKVGSIAPKKFIARLRKEKEEFD 507
+ KKK +IAP F +R + F+
Sbjct: 628 MWAAKKK--NIAPNDFNDAIRLSSDMFE 653
>AF067616-2|AAC19188.2| 551|Caenorhabditis elegans Deubiquitylating
with usp/ubp andotu domains protein 2 protein.
Length = 551
Score = 33.9 bits (74), Expect = 0.14
Identities = 14/22 (63%), Positives = 16/22 (72%)
Frame = +1
Query: 271 LVNFGNTCYSNSVLQALYFCRP 336
LVN GN+CY NS LQA+ C P
Sbjct: 36 LVNTGNSCYYNSTLQAMSSCGP 57
>AC091125-6|AAK27886.3| 474|Caenorhabditis elegans Hypothetical
protein Y67D2.2 protein.
Length = 474
Score = 33.9 bits (74), Expect = 0.14
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = +1
Query: 268 GLVNFGNTCYSNSVLQALYFCRPF 339
GL N GNTCY N++LQ L C F
Sbjct: 46 GLANQGNTCYMNALLQGLASCPSF 69
>Z74033-4|CAA98471.2| 822|Caenorhabditis elegans Hypothetical
protein F38B7.5 protein.
Length = 822
Score = 33.5 bits (73), Expect = 0.18
Identities = 13/22 (59%), Positives = 16/22 (72%)
Frame = +1
Query: 271 LVNFGNTCYSNSVLQALYFCRP 336
LVN GN+CY NS +QA+ C P
Sbjct: 216 LVNTGNSCYYNSTMQAVSSCNP 237
>AB095019-1|BAC22611.1| 822|Caenorhabditis elegans
ubiquitin-specific protease protein.
Length = 822
Score = 33.5 bits (73), Expect = 0.18
Identities = 13/22 (59%), Positives = 16/22 (72%)
Frame = +1
Query: 271 LVNFGNTCYSNSVLQALYFCRP 336
LVN GN+CY NS +QA+ C P
Sbjct: 216 LVNTGNSCYYNSTMQAVSSCNP 237
>Z83236-11|CAB05785.1| 489|Caenorhabditis elegans Hypothetical
protein C13B4.2 protein.
Length = 489
Score = 32.3 bits (70), Expect = 0.42
Identities = 25/65 (38%), Positives = 34/65 (52%), Gaps = 3/65 (4%)
Frame = +1
Query: 268 GLVNFGNTCYSNSVLQALYFCRPFREKVLEYKAKNKRTKE---TLLTCLADLFYSIATQK 438
GL N GNTCY NS +Q L + E VL+ A+ R +E L LA LF S+ +
Sbjct: 103 GLANLGNTCYFNSCVQML---KEVNELVLK-PAEEMRIREHNDRLCHNLATLFNSLRDKD 158
Query: 439 KKVGS 453
+ + S
Sbjct: 159 RALRS 163
>Z81468-3|CAB03876.1| 489|Caenorhabditis elegans Hypothetical
protein C13B4.2 protein.
Length = 489
Score = 32.3 bits (70), Expect = 0.42
Identities = 25/65 (38%), Positives = 34/65 (52%), Gaps = 3/65 (4%)
Frame = +1
Query: 268 GLVNFGNTCYSNSVLQALYFCRPFREKVLEYKAKNKRTKE---TLLTCLADLFYSIATQK 438
GL N GNTCY NS +Q L + E VL+ A+ R +E L LA LF S+ +
Sbjct: 103 GLANLGNTCYFNSCVQML---KEVNELVLK-PAEEMRIREHNDRLCHNLATLFNSLRDKD 158
Query: 439 KKVGS 453
+ + S
Sbjct: 159 RALRS 163
>U97012-5|AAK39149.1| 515|Caenorhabditis elegans Hypothetical
protein C04E6.5 protein.
Length = 515
Score = 32.3 bits (70), Expect = 0.42
Identities = 13/23 (56%), Positives = 16/23 (69%)
Frame = +1
Query: 271 LVNFGNTCYSNSVLQALYFCRPF 339
LVN GN+C+ NS +QAL C F
Sbjct: 147 LVNTGNSCFLNSTMQALSSCHSF 169
>U32223-1|AAA74956.1| 489|Caenorhabditis elegans tRNA-guanine
transglycosylase protein.
Length = 489
Score = 32.3 bits (70), Expect = 0.42
Identities = 25/65 (38%), Positives = 34/65 (52%), Gaps = 3/65 (4%)
Frame = +1
Query: 268 GLVNFGNTCYSNSVLQALYFCRPFREKVLEYKAKNKRTKE---TLLTCLADLFYSIATQK 438
GL N GNTCY NS +Q L + E VL+ A+ R +E L LA LF S+ +
Sbjct: 103 GLANLGNTCYFNSCVQML---KEVNELVLK-PAEEMRIREHNDRLCHNLATLFNSLRDKD 158
Query: 439 KKVGS 453
+ + S
Sbjct: 159 RALRS 163
>Z66511-5|CAA91317.1| 1095|Caenorhabditis elegans Hypothetical
protein F07A11.4 protein.
Length = 1095
Score = 31.9 bits (69), Expect = 0.55
Identities = 13/20 (65%), Positives = 15/20 (75%)
Frame = +1
Query: 262 YFGLVNFGNTCYSNSVLQAL 321
Y GL N GNTC+ N+VLQ L
Sbjct: 422 YTGLRNIGNTCFMNAVLQML 441
Score = 29.9 bits (64), Expect = 2.2
Identities = 17/82 (20%), Positives = 39/82 (47%), Gaps = 3/82 (3%)
Frame = +3
Query: 507 HYMQQDAHEFLNFLINHINEIILAERNQSTLKVQKNNSGENVTCNGSVPHN---TEPTWV 677
++ Q DAHEFL+FL++ ++E + + + +++ ++ + N +
Sbjct: 509 NFAQHDAHEFLSFLLDGLHEDVNRVKKKPLTGTVESHGRHDLDVSNEAWKNHILRNDSIF 568
Query: 678 HEIFQGTLTSETRCLTVRRSAV 743
++F G L S +C R ++
Sbjct: 569 VDLFHGQLKSHVQCPNCDRVSI 590
>AF100662-1|AAC68977.1| 900|Caenorhabditis elegans Hypothetical
protein H34C03.2 protein.
Length = 900
Score = 31.9 bits (69), Expect = 0.55
Identities = 23/73 (31%), Positives = 31/73 (42%), Gaps = 5/73 (6%)
Frame = +1
Query: 268 GLVNFGNTCYSNSVLQALYFCRPFREKVLEYKAKNKRTKETLLTCLADLFYSIATQKKKV 447
GL N GNTC+ S Q L P RE L +N ++ L L ++ K +
Sbjct: 276 GLSNLGNTCFMASAFQCLSNMPPLREYFLANTYQNDINEDNPLGTHGHLAMAVGELMKGM 335
Query: 448 -----GSIAPKKF 471
SI P+KF
Sbjct: 336 WSGDYASINPRKF 348
>U41034-5|AAA82381.1| 567|Caenorhabditis elegans Hypothetical
protein M02D8.4a protein.
Length = 567
Score = 29.9 bits (64), Expect = 2.2
Identities = 18/53 (33%), Positives = 26/53 (49%), Gaps = 1/53 (1%)
Frame = +3
Query: 645 SVPHNTEPTWVHEIFQGTLTSETRCLTVRRSAVKMSISLITGGRGS-KHEHHA 800
+ PH+ E ++ +IF SE LTVR+ K + GR S HE+ A
Sbjct: 489 NTPHSKEAFYMRKIFHEQFPSEQAALTVRKWIPKWQKNQDPSGRASLVHENSA 541
>AL117206-11|CAB60453.3| 1237|Caenorhabditis elegans Hypothetical
protein Y67A10A.3 protein.
Length = 1237
Score = 29.9 bits (64), Expect = 2.2
Identities = 14/41 (34%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
Frame = +2
Query: 665 TDLGARNIPRNINKRDEVSHCET-VSSKDEHFFDYRWTWVK 784
T++ N N +K D+ H T + EH FD +W WV+
Sbjct: 1071 TNVTLYNSNFNCSKWDQFQHVLTELGVSPEHLFDGKWNWVR 1111
>AL032631-11|CAB63341.1| 975|Caenorhabditis elegans Hypothetical
protein Y106G6H.12 protein.
Length = 975
Score = 29.9 bits (64), Expect = 2.2
Identities = 12/20 (60%), Positives = 14/20 (70%)
Frame = +1
Query: 271 LVNFGNTCYSNSVLQALYFC 330
L N GN+CY NS +QAL C
Sbjct: 284 LYNTGNSCYFNSTMQALSSC 303
>AC006730-8|AAO91687.1| 154|Caenorhabditis elegans Hypothetical
protein Y27F2A.8 protein.
Length = 154
Score = 29.5 bits (63), Expect = 2.9
Identities = 13/35 (37%), Positives = 19/35 (54%), Gaps = 2/35 (5%)
Frame = +2
Query: 668 DLGARNIPRNINKRDEVS--HCETVSSKDEHFFDY 766
+ R IP N+ +R + +C TV+ EHF DY
Sbjct: 97 NFNGRRIPINVTRRKKTIFVYCSTVTDGFEHFLDY 131
>AL132898-1|CAC14405.1| 357|Caenorhabditis elegans Hypothetical
protein Y59A8B.2 protein.
Length = 357
Score = 28.7 bits (61), Expect = 5.1
Identities = 10/19 (52%), Positives = 14/19 (73%)
Frame = +1
Query: 268 GLVNFGNTCYSNSVLQALY 324
GL N GNTC+ ++ LQ L+
Sbjct: 25 GLFNMGNTCFMSATLQCLF 43
>AF026212-1|AAF99971.1| 807|Caenorhabditis elegans Hypothetical
protein F52G3.3 protein.
Length = 807
Score = 28.7 bits (61), Expect = 5.1
Identities = 20/84 (23%), Positives = 40/84 (47%), Gaps = 2/84 (2%)
Frame = +1
Query: 277 NFGN-TCYSNSVLQALYFCRPFREKVLEYKAKNKRTKETLLTCLADLFYSIATQKKKVGS 453
+FG C+ N++L L+ REK +E+ +++ KE L + +F K++
Sbjct: 569 SFGQQNCFMNALLNMLFVSATIREKFVEF---HQQRKEKLSAEVGRIFRGNVKSVKRLRH 625
Query: 454 IAPKK-FIARLRKEKEEFDITCNK 522
+ P + + A + E F++ K
Sbjct: 626 LLPNRGYHAGQQNVSEAFNVLREK 649
>AF016681-19|AAO91735.1| 204|Caenorhabditis elegans Hypothetical
protein F22E5.20 protein.
Length = 204
Score = 28.7 bits (61), Expect = 5.1
Identities = 12/35 (34%), Positives = 19/35 (54%), Gaps = 2/35 (5%)
Frame = +2
Query: 668 DLGARNIPRNINKRDEVS--HCETVSSKDEHFFDY 766
+ R IP N+ ++ + +C TV+ EHF DY
Sbjct: 97 NFNGRRIPINVTRKQKTIFVYCSTVTDGFEHFLDY 131
>Z73974-4|CAA98269.1| 481|Caenorhabditis elegans Hypothetical
protein F29F11.1 protein.
Length = 481
Score = 28.3 bits (60), Expect = 6.8
Identities = 18/71 (25%), Positives = 31/71 (43%), Gaps = 6/71 (8%)
Frame = +1
Query: 274 VNFGNTCYSNSVLQALYFCRPFR-EKVLEY-----KAKNKRTKETLLTCLADLFYSIATQ 435
V FG +C+ VL +Y C +V +Y N + + +A+LF ++ +
Sbjct: 277 VGFGGSCFQKDVLSLVYLCESLNLPQVADYWQGVININNWQRRRFADKIIAELFNTVTDK 336
Query: 436 KKKVGSIAPKK 468
K + A KK
Sbjct: 337 KIAIFGFAFKK 347
>AY147932-1|AAN39842.1| 481|Caenorhabditis elegans UDP-glucose
dehydrogenase protein.
Length = 481
Score = 28.3 bits (60), Expect = 6.8
Identities = 18/71 (25%), Positives = 31/71 (43%), Gaps = 6/71 (8%)
Frame = +1
Query: 274 VNFGNTCYSNSVLQALYFCRPFR-EKVLEY-----KAKNKRTKETLLTCLADLFYSIATQ 435
V FG +C+ VL +Y C +V +Y N + + +A+LF ++ +
Sbjct: 277 VGFGGSCFQKDVLSLVYLCESLNLPQVADYWQGVININNWQRRRFADKIIAELFNTVTDK 336
Query: 436 KKKVGSIAPKK 468
K + A KK
Sbjct: 337 KIAIFGFAFKK 347
>AF100662-2|AAC68976.1| 478|Caenorhabditis elegans Hypothetical
protein H34C03.1 protein.
Length = 478
Score = 28.3 bits (60), Expect = 6.8
Identities = 16/43 (37%), Positives = 23/43 (53%)
Frame = +3
Query: 663 EPTWVHEIFQGTLTSETRCLTVRRSAVKMSISLITGGRGSKHE 791
E T + +F+GT SE L+ +SAV + L+ G G HE
Sbjct: 341 ERTDIDMVFEGTPLSEADKLSASKSAVARDV-LLDGSEGRCHE 382
>Z35663-14|CAA84733.1| 805|Caenorhabditis elegans Hypothetical
protein T04A8.16 protein.
Length = 805
Score = 27.9 bits (59), Expect = 9.0
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = -3
Query: 784 FDPRPPVIKEMLIFTADRLTVRHLVSLVNVPWN 686
FDP K+ IF D +VRH ++ V WN
Sbjct: 511 FDPEVAAEKDDGIFWIDYESVRHFFDVIYVNWN 543
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,269,152
Number of Sequences: 27780
Number of extensions: 384660
Number of successful extensions: 1018
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 959
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1015
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1966828226
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -