Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV32682
(574 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L04490-1|AAA36350.1| 375|Homo sapiens NADH dehydrogenase (ubiqu... 138 1e-32
BC111546-1|AAI11547.1| 377|Homo sapiens NADH dehydrogenase (ubi... 138 1e-32
BC015837-1|AAH15837.1| 377|Homo sapiens NADH dehydrogenase (ubi... 138 1e-32
BC009311-1|AAH09311.1| 377|Homo sapiens NADH dehydrogenase (ubi... 138 1e-32
AF050641-1|AAD42055.1| 377|Homo sapiens NADH-ubiquinone oxidore... 138 1e-32
BC003351-1|AAH03351.1| 338|Homo sapiens Similar to NADH dehydro... 137 2e-32
>L04490-1|AAA36350.1| 375|Homo sapiens NADH dehydrogenase
(ubiquinone) protein.
Length = 375
Score = 138 bits (334), Expect = 1e-32
Identities = 67/125 (53%), Positives = 90/125 (72%)
Frame = +2
Query: 197 RKPNLAAYKRGTGGRSSFNGIVATVFGCTGFVGRYVCNKLGKIGTQLILPYRGDFYDAQR 376
R+ + A G GGRSS +GIVATVFG TGF+GRYV N LG++G+Q+I+PYR D YD
Sbjct: 32 RQLHHALMPHGKGGRSSVSGIVATVFGATGFLGRYVVNHLGRMGSQVIIPYRCDKYDIMH 91
Query: 377 LKVCGDLCQVLFTPYHLLDEESIAKAVRYSNVVINLVGRDYETKNFKYNDVHVDGVRRIA 556
L+ GDL Q+LF + D++SI + V++SNVVINL+GRD+ETKNF + DV V + IA
Sbjct: 92 LRPMGDLGQLLFLEWDARDKDSIRRVVQHSNVVINLIGRDWETKNFDFEDVFVKIPQAIA 151
Query: 557 RICTE 571
++ E
Sbjct: 152 QLSKE 156
>BC111546-1|AAI11547.1| 377|Homo sapiens NADH dehydrogenase
(ubiquinone) 1 alpha subcomplex, 9, 39kDa protein.
Length = 377
Score = 138 bits (334), Expect = 1e-32
Identities = 67/125 (53%), Positives = 90/125 (72%)
Frame = +2
Query: 197 RKPNLAAYKRGTGGRSSFNGIVATVFGCTGFVGRYVCNKLGKIGTQLILPYRGDFYDAQR 376
R+ + A G GGRSS +GIVATVFG TGF+GRYV N LG++G+Q+I+PYR D YD
Sbjct: 34 RQLHHALMPHGKGGRSSVSGIVATVFGATGFLGRYVVNHLGRMGSQVIIPYRCDKYDIMH 93
Query: 377 LKVCGDLCQVLFTPYHLLDEESIAKAVRYSNVVINLVGRDYETKNFKYNDVHVDGVRRIA 556
L+ GDL Q+LF + D++SI + V++SNVVINL+GRD+ETKNF + DV V + IA
Sbjct: 94 LRPMGDLGQLLFLEWDARDKDSIRRVVQHSNVVINLIGRDWETKNFDFEDVFVKIPQAIA 153
Query: 557 RICTE 571
++ E
Sbjct: 154 QLSKE 158
>BC015837-1|AAH15837.1| 377|Homo sapiens NADH dehydrogenase
(ubiquinone) 1 alpha subcomplex, 9, 39kDa protein.
Length = 377
Score = 138 bits (334), Expect = 1e-32
Identities = 67/125 (53%), Positives = 90/125 (72%)
Frame = +2
Query: 197 RKPNLAAYKRGTGGRSSFNGIVATVFGCTGFVGRYVCNKLGKIGTQLILPYRGDFYDAQR 376
R+ + A G GGRSS +GIVATVFG TGF+GRYV N LG++G+Q+I+PYR D YD
Sbjct: 34 RQLHHALMPHGKGGRSSVSGIVATVFGATGFLGRYVVNHLGRMGSQVIIPYRCDKYDIMH 93
Query: 377 LKVCGDLCQVLFTPYHLLDEESIAKAVRYSNVVINLVGRDYETKNFKYNDVHVDGVRRIA 556
L+ GDL Q+LF + D++SI + V++SNVVINL+GRD+ETKNF + DV V + IA
Sbjct: 94 LRPMGDLGQLLFLEWDARDKDSIRRVVQHSNVVINLIGRDWETKNFDFEDVFVKIPQAIA 153
Query: 557 RICTE 571
++ E
Sbjct: 154 QLSKE 158
>BC009311-1|AAH09311.1| 377|Homo sapiens NADH dehydrogenase
(ubiquinone) 1 alpha subcomplex, 9, 39kDa protein.
Length = 377
Score = 138 bits (334), Expect = 1e-32
Identities = 67/125 (53%), Positives = 90/125 (72%)
Frame = +2
Query: 197 RKPNLAAYKRGTGGRSSFNGIVATVFGCTGFVGRYVCNKLGKIGTQLILPYRGDFYDAQR 376
R+ + A G GGRSS +GIVATVFG TGF+GRYV N LG++G+Q+I+PYR D YD
Sbjct: 34 RQLHHALMPHGKGGRSSVSGIVATVFGATGFLGRYVVNHLGRMGSQVIIPYRCDKYDIMH 93
Query: 377 LKVCGDLCQVLFTPYHLLDEESIAKAVRYSNVVINLVGRDYETKNFKYNDVHVDGVRRIA 556
L+ GDL Q+LF + D++SI + V++SNVVINL+GRD+ETKNF + DV V + IA
Sbjct: 94 LRPMGDLGQLLFLEWDARDKDSIRRVVQHSNVVINLIGRDWETKNFDFEDVFVKIPQAIA 153
Query: 557 RICTE 571
++ E
Sbjct: 154 QLSKE 158
>AF050641-1|AAD42055.1| 377|Homo sapiens NADH-ubiquinone
oxidoreductase 39kDa subunit protein.
Length = 377
Score = 138 bits (334), Expect = 1e-32
Identities = 67/125 (53%), Positives = 90/125 (72%)
Frame = +2
Query: 197 RKPNLAAYKRGTGGRSSFNGIVATVFGCTGFVGRYVCNKLGKIGTQLILPYRGDFYDAQR 376
R+ + A G GGRSS +GIVATVFG TGF+GRYV N LG++G+Q+I+PYR D YD
Sbjct: 34 RQLHHALMPHGKGGRSSVSGIVATVFGATGFLGRYVVNHLGRMGSQVIIPYRCDKYDIMH 93
Query: 377 LKVCGDLCQVLFTPYHLLDEESIAKAVRYSNVVINLVGRDYETKNFKYNDVHVDGVRRIA 556
L+ GDL Q+LF + D++SI + V++SNVVINL+GRD+ETKNF + DV V + IA
Sbjct: 94 LRPMGDLGQLLFLEWDARDKDSIRRVVQHSNVVINLIGRDWETKNFDFEDVFVKIPQAIA 153
Query: 557 RICTE 571
++ E
Sbjct: 154 QLSKE 158
>BC003351-1|AAH03351.1| 338|Homo sapiens Similar to NADH
dehydrogenase (ubiquinone) 1 alpha subcomplex, 9 (39kD)
protein.
Length = 338
Score = 137 bits (332), Expect = 2e-32
Identities = 65/115 (56%), Positives = 86/115 (74%)
Frame = +2
Query: 227 GTGGRSSFNGIVATVFGCTGFVGRYVCNKLGKIGTQLILPYRGDFYDAQRLKVCGDLCQV 406
G GGRSS +GIVATVFG TGF+GRYV N LG++G+Q+I+PYR D YD L+ GDL Q+
Sbjct: 5 GKGGRSSVSGIVATVFGATGFLGRYVVNHLGRMGSQVIIPYRCDKYDIMHLRPMGDLGQL 64
Query: 407 LFTPYHLLDEESIAKAVRYSNVVINLVGRDYETKNFKYNDVHVDGVRRIARICTE 571
LF + D++SI + V++SNVVINL+GRD+ETKNF + DV V + IA++ E
Sbjct: 65 LFLEWDARDKDSIRRVVQHSNVVINLIGRDWETKNFDFEDVFVKIPQAIAQLSKE 119
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 80,136,607
Number of Sequences: 237096
Number of extensions: 1659030
Number of successful extensions: 6285
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6255
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6285
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5872755824
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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