Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV32668
         (614 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC011347-1|AAH11347.1|  460|Homo sapiens tweety homolog 1 (Droso...    31   4.3  
AF177909-1|AAG02580.1|  450|Homo sapiens TTYH1 protein.                31   4.3  
AB188496-1|BAD37142.1|  451|Homo sapiens tweety homolog 1 (Droso...    31   4.3  
AB162930-1|BAD20189.1|  460|Homo sapiens hTTY1s protein.               31   4.3  

>BC011347-1|AAH11347.1|  460|Homo sapiens tweety homolog 1
           (Drosophila) protein.
          Length = 460

 Score = 30.7 bits (66), Expect = 4.3
 Identities = 17/52 (32%), Positives = 27/52 (51%)
 Frame = +3

Query: 255 SDLIEYVINTFIKKPHTLQTMADIRLDTENFDDEIVSKPVTTPEDVAGPRTD 410
           SD +  + +  +   HTL T+  + L+T     E V   +TT E+V  PRT+
Sbjct: 116 SDGVSQLSSALLHANHTLSTIDHLVLETVERLGEAVRTELTTLEEVLEPRTE 167


>AF177909-1|AAG02580.1|  450|Homo sapiens TTYH1 protein.
          Length = 450

 Score = 30.7 bits (66), Expect = 4.3
 Identities = 17/52 (32%), Positives = 27/52 (51%)
 Frame = +3

Query: 255 SDLIEYVINTFIKKPHTLQTMADIRLDTENFDDEIVSKPVTTPEDVAGPRTD 410
           SD +  + +  +   HTL T+  + L+T     E V   +TT E+V  PRT+
Sbjct: 116 SDGVSQLSSALLHANHTLSTIDHLVLETVERLGEAVRTELTTLEEVLEPRTE 167


>AB188496-1|BAD37142.1|  451|Homo sapiens tweety homolog 1
           (Drosophila) protein.
          Length = 451

 Score = 30.7 bits (66), Expect = 4.3
 Identities = 17/52 (32%), Positives = 27/52 (51%)
 Frame = +3

Query: 255 SDLIEYVINTFIKKPHTLQTMADIRLDTENFDDEIVSKPVTTPEDVAGPRTD 410
           SD +  + +  +   HTL T+  + L+T     E V   +TT E+V  PRT+
Sbjct: 116 SDGVSQLSSALLHANHTLSTIDHLVLETVERLGEAVRTELTTLEEVLEPRTE 167


>AB162930-1|BAD20189.1|  460|Homo sapiens hTTY1s protein.
          Length = 460

 Score = 30.7 bits (66), Expect = 4.3
 Identities = 17/52 (32%), Positives = 27/52 (51%)
 Frame = +3

Query: 255 SDLIEYVINTFIKKPHTLQTMADIRLDTENFDDEIVSKPVTTPEDVAGPRTD 410
           SD +  + +  +   HTL T+  + L+T     E V   +TT E+V  PRT+
Sbjct: 116 SDGVSQLSSALLHANHTLSTIDHLVLETVERLGEAVRTELTTLEEVLEPRTE 167


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 76,846,362
Number of Sequences: 237096
Number of extensions: 1350328
Number of successful extensions: 2254
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 2223
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2254
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6579110070
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)