Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV32661
(638 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z25749-1|CAA81022.1| 194|Homo sapiens ribosomal protein S7 prot... 230 4e-60
M77233-1|AAB00969.1| 192|Homo sapiens ribosomal protein protein. 230 4e-60
BC071919-1|AAH71919.1| 194|Homo sapiens ribosomal protein S7 pr... 230 4e-60
BC061901-1|AAH61901.1| 194|Homo sapiens ribosomal protein S7 pr... 230 4e-60
BC002866-1|AAH02866.1| 194|Homo sapiens ribosomal protein S7 pr... 230 4e-60
AC108488-2|AAX82027.1| 194|Homo sapiens unknown protein. 230 4e-60
AB209386-1|BAD92623.1| 78|Homo sapiens ribosomal protein S7 va... 87 4e-17
X13482-1|CAA31838.1| 255|Homo sapiens protein ( Human mRNA for ... 30 6.0
BC126410-1|AAI26411.1| 516|Homo sapiens leucine rich repeat tra... 30 6.0
BC126408-1|AAI26409.1| 516|Homo sapiens leucine rich repeat tra... 30 6.0
BC125176-1|AAI25177.1| 577|Homo sapiens ACSM2A protein protein. 30 6.0
BC071717-1|AAH71717.1| 255|Homo sapiens small nuclear ribonucle... 30 6.0
BC022816-1|AAH22816.1| 255|Homo sapiens small nuclear ribonucle... 30 6.0
AY182026-1|AAO67547.1| 516|Homo sapiens leucine-rich repeat tra... 30 6.0
AL078621-9|CAB81646.1| 255|Homo sapiens protein ( G islands. ).). 30 6.0
AK223070-1|BAD96790.1| 255|Homo sapiens small nuclear ribonucle... 30 6.0
AB007876-1|BAA24846.2| 529|Homo sapiens KIAA0416 protein. 30 6.0
>Z25749-1|CAA81022.1| 194|Homo sapiens ribosomal protein S7
protein.
Length = 194
Score = 230 bits (562), Expect = 4e-60
Identities = 111/155 (71%), Positives = 131/155 (84%), Gaps = 1/155 (0%)
Frame = +1
Query: 112 KPNFGELYITKAKEIELHN-KKSIIIYVPMPKLKAFQKIQIRLVRELEKKFSGKHVVFVG 288
K EL IT AKEIE+ +K+III+VP+P+LK+FQKIQ+RLVRELEKKFSGKHVVF+
Sbjct: 37 KAQLRELNITAAKEIEVGGGRKAIIIFVPVPQLKSFQKIQVRLVRELEKKFSGKHVVFIA 96
Query: 289 DRKILPKPSHKTRVANKQKRPRSRTLTSVYDAILEDLXFPAEIVGKRIRVKLDGSQLIXV 468
R+ILPKP+ K+R NKQKRPRSRTLT+V+DAILEDL FP+EIVGKRIRVKLDGS+LI V
Sbjct: 97 QRRILPKPTRKSRTKNKQKRPRSRTLTAVHDAILEDLVFPSEIVGKRIRVKLDGSRLIKV 156
Query: 469 HLDKNQQTTIXHKVDTFQXVYKKLTGREVXFEXPE 573
HLDK QQ + HKV+TF VYKKLTG++V FE PE
Sbjct: 157 HLDKAQQNNVEHKVETFSGVYKKLTGKDVNFEFPE 191
Score = 53.2 bits (122), Expect = 7e-07
Identities = 25/37 (67%), Positives = 30/37 (81%)
Frame = +3
Query: 15 STKIIKASGAEADSFETSISQALVELETNSDLKAQLR 125
S KI+K +G + D FE+ ISQAL+ELE NSDLKAQLR
Sbjct: 5 SAKIVKPNGEKPDEFESGISQALLELEMNSDLKAQLR 41
>M77233-1|AAB00969.1| 192|Homo sapiens ribosomal protein protein.
Length = 192
Score = 230 bits (562), Expect = 4e-60
Identities = 111/155 (71%), Positives = 131/155 (84%), Gaps = 1/155 (0%)
Frame = +1
Query: 112 KPNFGELYITKAKEIELHN-KKSIIIYVPMPKLKAFQKIQIRLVRELEKKFSGKHVVFVG 288
K EL IT AKEIE+ +K+III+VP+P+LK+FQKIQ+RLVRELEKKFSGKHVVF+
Sbjct: 35 KAQLRELNITAAKEIEVGGGRKAIIIFVPVPQLKSFQKIQVRLVRELEKKFSGKHVVFIA 94
Query: 289 DRKILPKPSHKTRVANKQKRPRSRTLTSVYDAILEDLXFPAEIVGKRIRVKLDGSQLIXV 468
R+ILPKP+ K+R NKQKRPRSRTLT+V+DAILEDL FP+EIVGKRIRVKLDGS+LI V
Sbjct: 95 QRRILPKPTRKSRTKNKQKRPRSRTLTAVHDAILEDLVFPSEIVGKRIRVKLDGSRLIKV 154
Query: 469 HLDKNQQTTIXHKVDTFQXVYKKLTGREVXFEXPE 573
HLDK QQ + HKV+TF VYKKLTG++V FE PE
Sbjct: 155 HLDKAQQNNVEHKVETFSGVYKKLTGKDVNFEFPE 189
Score = 53.2 bits (122), Expect = 7e-07
Identities = 25/37 (67%), Positives = 30/37 (81%)
Frame = +3
Query: 15 STKIIKASGAEADSFETSISQALVELETNSDLKAQLR 125
S KI+K +G + D FE+ ISQAL+ELE NSDLKAQLR
Sbjct: 3 SAKIVKPNGEKPDEFESGISQALLELEMNSDLKAQLR 39
>BC071919-1|AAH71919.1| 194|Homo sapiens ribosomal protein S7
protein.
Length = 194
Score = 230 bits (562), Expect = 4e-60
Identities = 111/155 (71%), Positives = 131/155 (84%), Gaps = 1/155 (0%)
Frame = +1
Query: 112 KPNFGELYITKAKEIELHN-KKSIIIYVPMPKLKAFQKIQIRLVRELEKKFSGKHVVFVG 288
K EL IT AKEIE+ +K+III+VP+P+LK+FQKIQ+RLVRELEKKFSGKHVVF+
Sbjct: 37 KAQLRELNITAAKEIEVGGGRKAIIIFVPVPQLKSFQKIQVRLVRELEKKFSGKHVVFIA 96
Query: 289 DRKILPKPSHKTRVANKQKRPRSRTLTSVYDAILEDLXFPAEIVGKRIRVKLDGSQLIXV 468
R+ILPKP+ K+R NKQKRPRSRTLT+V+DAILEDL FP+EIVGKRIRVKLDGS+LI V
Sbjct: 97 QRRILPKPTRKSRTKNKQKRPRSRTLTAVHDAILEDLVFPSEIVGKRIRVKLDGSRLIKV 156
Query: 469 HLDKNQQTTIXHKVDTFQXVYKKLTGREVXFEXPE 573
HLDK QQ + HKV+TF VYKKLTG++V FE PE
Sbjct: 157 HLDKAQQNNVEHKVETFSGVYKKLTGKDVNFEFPE 191
Score = 53.2 bits (122), Expect = 7e-07
Identities = 25/37 (67%), Positives = 30/37 (81%)
Frame = +3
Query: 15 STKIIKASGAEADSFETSISQALVELETNSDLKAQLR 125
S KI+K +G + D FE+ ISQAL+ELE NSDLKAQLR
Sbjct: 5 SAKIVKPNGEKPDEFESGISQALLELEMNSDLKAQLR 41
>BC061901-1|AAH61901.1| 194|Homo sapiens ribosomal protein S7
protein.
Length = 194
Score = 230 bits (562), Expect = 4e-60
Identities = 111/155 (71%), Positives = 131/155 (84%), Gaps = 1/155 (0%)
Frame = +1
Query: 112 KPNFGELYITKAKEIELHN-KKSIIIYVPMPKLKAFQKIQIRLVRELEKKFSGKHVVFVG 288
K EL IT AKEIE+ +K+III+VP+P+LK+FQKIQ+RLVRELEKKFSGKHVVF+
Sbjct: 37 KAQLRELNITAAKEIEVGGGRKAIIIFVPVPQLKSFQKIQVRLVRELEKKFSGKHVVFIA 96
Query: 289 DRKILPKPSHKTRVANKQKRPRSRTLTSVYDAILEDLXFPAEIVGKRIRVKLDGSQLIXV 468
R+ILPKP+ K+R NKQKRPRSRTLT+V+DAILEDL FP+EIVGKRIRVKLDGS+LI V
Sbjct: 97 QRRILPKPTRKSRTKNKQKRPRSRTLTAVHDAILEDLVFPSEIVGKRIRVKLDGSRLIKV 156
Query: 469 HLDKNQQTTIXHKVDTFQXVYKKLTGREVXFEXPE 573
HLDK QQ + HKV+TF VYKKLTG++V FE PE
Sbjct: 157 HLDKAQQNNVEHKVETFSGVYKKLTGKDVNFEFPE 191
Score = 53.2 bits (122), Expect = 7e-07
Identities = 25/37 (67%), Positives = 30/37 (81%)
Frame = +3
Query: 15 STKIIKASGAEADSFETSISQALVELETNSDLKAQLR 125
S KI+K +G + D FE+ ISQAL+ELE NSDLKAQLR
Sbjct: 5 SAKIVKPNGEKPDEFESGISQALLELEMNSDLKAQLR 41
>BC002866-1|AAH02866.1| 194|Homo sapiens ribosomal protein S7
protein.
Length = 194
Score = 230 bits (562), Expect = 4e-60
Identities = 111/155 (71%), Positives = 131/155 (84%), Gaps = 1/155 (0%)
Frame = +1
Query: 112 KPNFGELYITKAKEIELHN-KKSIIIYVPMPKLKAFQKIQIRLVRELEKKFSGKHVVFVG 288
K EL IT AKEIE+ +K+III+VP+P+LK+FQKIQ+RLVRELEKKFSGKHVVF+
Sbjct: 37 KAQLRELNITAAKEIEVGGGRKAIIIFVPVPQLKSFQKIQVRLVRELEKKFSGKHVVFIA 96
Query: 289 DRKILPKPSHKTRVANKQKRPRSRTLTSVYDAILEDLXFPAEIVGKRIRVKLDGSQLIXV 468
R+ILPKP+ K+R NKQKRPRSRTLT+V+DAILEDL FP+EIVGKRIRVKLDGS+LI V
Sbjct: 97 QRRILPKPTRKSRTKNKQKRPRSRTLTAVHDAILEDLVFPSEIVGKRIRVKLDGSRLIKV 156
Query: 469 HLDKNQQTTIXHKVDTFQXVYKKLTGREVXFEXPE 573
HLDK QQ + HKV+TF VYKKLTG++V FE PE
Sbjct: 157 HLDKAQQNNVEHKVETFSGVYKKLTGKDVNFEFPE 191
Score = 53.2 bits (122), Expect = 7e-07
Identities = 25/37 (67%), Positives = 30/37 (81%)
Frame = +3
Query: 15 STKIIKASGAEADSFETSISQALVELETNSDLKAQLR 125
S KI+K +G + D FE+ ISQAL+ELE NSDLKAQLR
Sbjct: 5 SAKIVKPNGEKPDEFESGISQALLELEMNSDLKAQLR 41
>AC108488-2|AAX82027.1| 194|Homo sapiens unknown protein.
Length = 194
Score = 230 bits (562), Expect = 4e-60
Identities = 111/155 (71%), Positives = 131/155 (84%), Gaps = 1/155 (0%)
Frame = +1
Query: 112 KPNFGELYITKAKEIELHN-KKSIIIYVPMPKLKAFQKIQIRLVRELEKKFSGKHVVFVG 288
K EL IT AKEIE+ +K+III+VP+P+LK+FQKIQ+RLVRELEKKFSGKHVVF+
Sbjct: 37 KAQLRELNITAAKEIEVGGGRKAIIIFVPVPQLKSFQKIQVRLVRELEKKFSGKHVVFIA 96
Query: 289 DRKILPKPSHKTRVANKQKRPRSRTLTSVYDAILEDLXFPAEIVGKRIRVKLDGSQLIXV 468
R+ILPKP+ K+R NKQKRPRSRTLT+V+DAILEDL FP+EIVGKRIRVKLDGS+LI V
Sbjct: 97 QRRILPKPTRKSRTKNKQKRPRSRTLTAVHDAILEDLVFPSEIVGKRIRVKLDGSRLIKV 156
Query: 469 HLDKNQQTTIXHKVDTFQXVYKKLTGREVXFEXPE 573
HLDK QQ + HKV+TF VYKKLTG++V FE PE
Sbjct: 157 HLDKAQQNNVEHKVETFSGVYKKLTGKDVNFEFPE 191
Score = 53.2 bits (122), Expect = 7e-07
Identities = 25/37 (67%), Positives = 30/37 (81%)
Frame = +3
Query: 15 STKIIKASGAEADSFETSISQALVELETNSDLKAQLR 125
S KI+K +G + D FE+ ISQAL+ELE NSDLKAQLR
Sbjct: 5 SAKIVKPNGEKPDEFESGISQALLELEMNSDLKAQLR 41
>AB209386-1|BAD92623.1| 78|Homo sapiens ribosomal protein S7
variant protein.
Length = 78
Score = 87.4 bits (207), Expect = 4e-17
Identities = 43/69 (62%), Positives = 52/69 (75%)
Frame = +1
Query: 355 SRTLTSVYDAILEDLXFPAEIVGKRIRVKLDGSQLIXVHLDKNQQTTIXHKVDTFQXVYK 534
SRTLT+V+DAILEDL FP+EIVGKRIRVKLDGS+LI VHLDK QQ + HKV + +
Sbjct: 10 SRTLTAVHDAILEDLVFPSEIVGKRIRVKLDGSRLIKVHLDKAQQNNVEHKVIGQHFIME 69
Query: 535 KLTGREVXF 561
+ + E F
Sbjct: 70 RFSHSESGF 78
>X13482-1|CAA31838.1| 255|Homo sapiens protein ( Human mRNA for U2
snRNP-specific A' protein. ).
Length = 255
Score = 30.3 bits (65), Expect = 6.0
Identities = 13/36 (36%), Positives = 22/36 (61%)
Frame = +1
Query: 163 HNKKSIIIYVPMPKLKAFQKIQIRLVRELEKKFSGK 270
H + +I VP ++ FQK++++ +E EK F GK
Sbjct: 130 HYRLYVIYKVPQVRVLDFQKVKLKERQEAEKMFKGK 165
>BC126410-1|AAI26411.1| 516|Homo sapiens leucine rich repeat
transmembrane neuronal 2 protein.
Length = 516
Score = 30.3 bits (65), Expect = 6.0
Identities = 15/28 (53%), Positives = 19/28 (67%)
Frame = +1
Query: 451 SQLIXVHLDKNQQTTIXHKVDTFQXVYK 534
SQL +HLD NQ +T+ K D FQ +YK
Sbjct: 85 SQLTWLHLDHNQISTV--KEDAFQGLYK 110
>BC126408-1|AAI26409.1| 516|Homo sapiens leucine rich repeat
transmembrane neuronal 2 protein.
Length = 516
Score = 30.3 bits (65), Expect = 6.0
Identities = 15/28 (53%), Positives = 19/28 (67%)
Frame = +1
Query: 451 SQLIXVHLDKNQQTTIXHKVDTFQXVYK 534
SQL +HLD NQ +T+ K D FQ +YK
Sbjct: 85 SQLTWLHLDHNQISTV--KEDAFQGLYK 110
>BC125176-1|AAI25177.1| 577|Homo sapiens ACSM2A protein protein.
Length = 577
Score = 30.3 bits (65), Expect = 6.0
Identities = 15/45 (33%), Positives = 23/45 (51%)
Frame = -1
Query: 527 TXWKVSTLCXIVVCWFLSKCTLMSCEPSNLTLMRLPTISAGKXKS 393
T W ++ LC ++ W L CT + P L+ L T+S+ KS
Sbjct: 263 TGWILNILCSLMEPWALGACTFVHLLPKFDPLVILKTLSSYPIKS 307
>BC071717-1|AAH71717.1| 255|Homo sapiens small nuclear
ribonucleoprotein polypeptide A' protein.
Length = 255
Score = 30.3 bits (65), Expect = 6.0
Identities = 13/36 (36%), Positives = 22/36 (61%)
Frame = +1
Query: 163 HNKKSIIIYVPMPKLKAFQKIQIRLVRELEKKFSGK 270
H + +I VP ++ FQK++++ +E EK F GK
Sbjct: 130 HYRLYVIYKVPQVRVLDFQKVKLKERQEAEKMFKGK 165
>BC022816-1|AAH22816.1| 255|Homo sapiens small nuclear
ribonucleoprotein polypeptide A' protein.
Length = 255
Score = 30.3 bits (65), Expect = 6.0
Identities = 13/36 (36%), Positives = 22/36 (61%)
Frame = +1
Query: 163 HNKKSIIIYVPMPKLKAFQKIQIRLVRELEKKFSGK 270
H + +I VP ++ FQK++++ +E EK F GK
Sbjct: 130 HYRLYVIYKVPQVRVLDFQKVKLKERQEAEKMFKGK 165
>AY182026-1|AAO67547.1| 516|Homo sapiens leucine-rich repeat
transmembrane neuronal 2 protein protein.
Length = 516
Score = 30.3 bits (65), Expect = 6.0
Identities = 15/28 (53%), Positives = 19/28 (67%)
Frame = +1
Query: 451 SQLIXVHLDKNQQTTIXHKVDTFQXVYK 534
SQL +HLD NQ +T+ K D FQ +YK
Sbjct: 85 SQLTWLHLDHNQISTV--KEDAFQGLYK 110
>AL078621-9|CAB81646.1| 255|Homo sapiens protein ( G islands. ).).
Length = 255
Score = 30.3 bits (65), Expect = 6.0
Identities = 13/36 (36%), Positives = 22/36 (61%)
Frame = +1
Query: 163 HNKKSIIIYVPMPKLKAFQKIQIRLVRELEKKFSGK 270
H + +I VP ++ FQK++++ +E EK F GK
Sbjct: 130 HYRLYVIYKVPQVRVLDFQKVKLKERQEAEKMFKGK 165
>AK223070-1|BAD96790.1| 255|Homo sapiens small nuclear
ribonucleoprotein polypeptide A' variant protein.
Length = 255
Score = 30.3 bits (65), Expect = 6.0
Identities = 13/36 (36%), Positives = 22/36 (61%)
Frame = +1
Query: 163 HNKKSIIIYVPMPKLKAFQKIQIRLVRELEKKFSGK 270
H + +I VP ++ FQK++++ +E EK F GK
Sbjct: 130 HYRLYVIYKVPQVRVLDFQKVKLKERQEAEKMFKGK 165
>AB007876-1|BAA24846.2| 529|Homo sapiens KIAA0416 protein.
Length = 529
Score = 30.3 bits (65), Expect = 6.0
Identities = 15/28 (53%), Positives = 19/28 (67%)
Frame = +1
Query: 451 SQLIXVHLDKNQQTTIXHKVDTFQXVYK 534
SQL +HLD NQ +T+ K D FQ +YK
Sbjct: 98 SQLTWLHLDHNQISTV--KEDAFQGLYK 123
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 75,392,551
Number of Sequences: 237096
Number of extensions: 1494525
Number of successful extensions: 2815
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 2679
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2815
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7028963750
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -