Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV32646
(360 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
J04973-1|AAA35710.1| 453|Homo sapiens protein ( Human cytochrom... 58 8e-09
BC003136-1|AAH03136.1| 453|Homo sapiens ubiquinol-cytochrome c ... 58 8e-09
BC000484-1|AAH00484.1| 453|Homo sapiens UQCRC2 protein protein. 58 8e-09
L16842-1|AAA20046.1| 480|Homo sapiens ubiquinol-cytochrome c re... 34 0.15
D26485-1|BAA05495.1| 480|Homo sapiens core I protein protein. 34 0.15
BC009586-1|AAH09586.1| 480|Homo sapiens ubiquinol-cytochrome c ... 34 0.15
BC062341-1|AAH62341.1| 1049|Homo sapiens slingshot homolog 1 (Dr... 28 7.6
AB072355-1|BAB84114.1| 1049|Homo sapiens hSSH-1L protein. 28 7.6
AB037719-1|BAA92536.1| 738|Homo sapiens KIAA1298 protein protein. 28 7.6
>J04973-1|AAA35710.1| 453|Homo sapiens protein ( Human cytochrome
bc-1 complex core protein II mRNA, complete cds. ).
Length = 453
Score = 58.0 bits (134), Expect = 8e-09
Identities = 29/71 (40%), Positives = 44/71 (61%)
Frame = +1
Query: 142 IRGYAQAAPAVKKDVRIQSSVLPNKTFVAALNNGSPVTRVTIAFKAGSRYEPQAELGLSH 321
++ A A A + ++ + LPN +A+L N SPV+R+ + KAGSRYE + LG +H
Sbjct: 22 VKATAAPAGAPPQPQDLEFTKLPNGLVIASLENYSPVSRIGLFIKAGSRYEDFSNLGTTH 81
Query: 322 VLRSAAGLTTK 354
+LR + LTTK
Sbjct: 82 LLRLTSSLTTK 92
>BC003136-1|AAH03136.1| 453|Homo sapiens ubiquinol-cytochrome c
reductase core protein II protein.
Length = 453
Score = 58.0 bits (134), Expect = 8e-09
Identities = 29/71 (40%), Positives = 44/71 (61%)
Frame = +1
Query: 142 IRGYAQAAPAVKKDVRIQSSVLPNKTFVAALNNGSPVTRVTIAFKAGSRYEPQAELGLSH 321
++ A A A + ++ + LPN +A+L N SPV+R+ + KAGSRYE + LG +H
Sbjct: 22 VKATAAPAGAPPQPQDLEFTKLPNGLVIASLENYSPVSRIGLFIKAGSRYEDFSNLGTTH 81
Query: 322 VLRSAAGLTTK 354
+LR + LTTK
Sbjct: 82 LLRLTSSLTTK 92
>BC000484-1|AAH00484.1| 453|Homo sapiens UQCRC2 protein protein.
Length = 453
Score = 58.0 bits (134), Expect = 8e-09
Identities = 29/71 (40%), Positives = 44/71 (61%)
Frame = +1
Query: 142 IRGYAQAAPAVKKDVRIQSSVLPNKTFVAALNNGSPVTRVTIAFKAGSRYEPQAELGLSH 321
++ A A A + ++ + LPN +A+L N SPV+R+ + KAGSRYE + LG +H
Sbjct: 22 VKATAAPAGAPPQPQDLEFTKLPNGLVIASLENYSPVSRIGLFIKAGSRYEDFSNLGTTH 81
Query: 322 VLRSAAGLTTK 354
+LR + LTTK
Sbjct: 82 LLRLTSSLTTK 92
>L16842-1|AAA20046.1| 480|Homo sapiens ubiquinol-cytochrome c
reductase core I protein protein.
Length = 480
Score = 33.9 bits (74), Expect = 0.15
Identities = 23/77 (29%), Positives = 34/77 (44%)
Frame = +1
Query: 127 IRHVTIRGYAQAAPAVKKDVRIQSSVLPNKTFVAALNNGSPVTRVTIAFKAGSRYEPQAE 306
+R +R A A A++ Q S+L N VA+ + P V + GSR+E +
Sbjct: 27 LRTPALRSTATFAQALQFVPETQVSLLDNGLRVASEQSSQPTCTVGVWIDVGSRFETEKN 86
Query: 307 LGLSHVLRSAAGLTTKN 357
G + L A TKN
Sbjct: 87 NGAGYFLEHLAFKGTKN 103
>D26485-1|BAA05495.1| 480|Homo sapiens core I protein protein.
Length = 480
Score = 33.9 bits (74), Expect = 0.15
Identities = 23/77 (29%), Positives = 34/77 (44%)
Frame = +1
Query: 127 IRHVTIRGYAQAAPAVKKDVRIQSSVLPNKTFVAALNNGSPVTRVTIAFKAGSRYEPQAE 306
+R +R A A A++ Q S+L N VA+ + P V + GSR+E +
Sbjct: 27 LRTPALRSTATFAQALQFVPETQVSLLDNGLRVASEQSSQPTCTVGVWIDVGSRFETEKN 86
Query: 307 LGLSHVLRSAAGLTTKN 357
G + L A TKN
Sbjct: 87 NGAGYFLEHLAFKGTKN 103
>BC009586-1|AAH09586.1| 480|Homo sapiens ubiquinol-cytochrome c
reductase core protein I protein.
Length = 480
Score = 33.9 bits (74), Expect = 0.15
Identities = 23/77 (29%), Positives = 34/77 (44%)
Frame = +1
Query: 127 IRHVTIRGYAQAAPAVKKDVRIQSSVLPNKTFVAALNNGSPVTRVTIAFKAGSRYEPQAE 306
+R +R A A A++ Q S+L N VA+ + P V + GSR+E +
Sbjct: 27 LRTPALRSTATFAQALQFVPETQVSLLDNGLRVASEQSSQPTCTVGVWIDVGSRFETEKN 86
Query: 307 LGLSHVLRSAAGLTTKN 357
G + L A TKN
Sbjct: 87 NGAGYFLEHLAFKGTKN 103
>BC062341-1|AAH62341.1| 1049|Homo sapiens slingshot homolog 1
(Drosophila) protein.
Length = 1049
Score = 28.3 bits (60), Expect = 7.6
Identities = 16/36 (44%), Positives = 21/36 (58%), Gaps = 4/36 (11%)
Frame = +3
Query: 99 GIQNSRRPLYSSCYDQGLRPSCAG----SKERC*DP 194
GI N +P Y SC D + P+ +G S+ERC DP
Sbjct: 637 GILNKVKPSYKSCAD-CMYPTASGAPEASRERCEDP 671
>AB072355-1|BAB84114.1| 1049|Homo sapiens hSSH-1L protein.
Length = 1049
Score = 28.3 bits (60), Expect = 7.6
Identities = 16/36 (44%), Positives = 21/36 (58%), Gaps = 4/36 (11%)
Frame = +3
Query: 99 GIQNSRRPLYSSCYDQGLRPSCAG----SKERC*DP 194
GI N +P Y SC D + P+ +G S+ERC DP
Sbjct: 637 GILNKVKPSYKSCAD-CMYPTASGAPEASRERCEDP 671
>AB037719-1|BAA92536.1| 738|Homo sapiens KIAA1298 protein protein.
Length = 738
Score = 28.3 bits (60), Expect = 7.6
Identities = 16/36 (44%), Positives = 21/36 (58%), Gaps = 4/36 (11%)
Frame = +3
Query: 99 GIQNSRRPLYSSCYDQGLRPSCAG----SKERC*DP 194
GI N +P Y SC D + P+ +G S+ERC DP
Sbjct: 326 GILNKVKPSYKSCAD-CMYPTASGAPEASRERCEDP 360
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 51,147,788
Number of Sequences: 237096
Number of extensions: 944828
Number of successful extensions: 5642
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 5617
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5642
length of database: 76,859,062
effective HSP length: 81
effective length of database: 57,654,286
effective search space used: 2190862868
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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