BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV32633
(378 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT015237-1|AAT94466.1| 1044|Drosophila melanogaster RE03681p pro... 28 4.6
AY058669-1|AAL13898.1| 1032|Drosophila melanogaster LD37985p pro... 28 4.6
AE014296-44|AAN11426.1| 1032|Drosophila melanogaster CG16940-PB,... 28 4.6
AE014296-43|AAF47351.2| 1032|Drosophila melanogaster CG16940-PA,... 28 4.6
AE014296-42|AAN11425.1| 1044|Drosophila melanogaster CG16940-PC,... 28 4.6
>BT015237-1|AAT94466.1| 1044|Drosophila melanogaster RE03681p
protein.
Length = 1044
Score = 27.9 bits (59), Expect = 4.6
Identities = 10/14 (71%), Positives = 12/14 (85%)
Frame = -1
Query: 84 LMHILERNCNGNCI 43
L HILE +CNG+CI
Sbjct: 492 LAHILETDCNGHCI 505
>AY058669-1|AAL13898.1| 1032|Drosophila melanogaster LD37985p
protein.
Length = 1032
Score = 27.9 bits (59), Expect = 4.6
Identities = 10/14 (71%), Positives = 12/14 (85%)
Frame = -1
Query: 84 LMHILERNCNGNCI 43
L HILE +CNG+CI
Sbjct: 480 LAHILETDCNGHCI 493
>AE014296-44|AAN11426.1| 1032|Drosophila melanogaster CG16940-PB,
isoform B protein.
Length = 1032
Score = 27.9 bits (59), Expect = 4.6
Identities = 10/14 (71%), Positives = 12/14 (85%)
Frame = -1
Query: 84 LMHILERNCNGNCI 43
L HILE +CNG+CI
Sbjct: 480 LAHILETDCNGHCI 493
>AE014296-43|AAF47351.2| 1032|Drosophila melanogaster CG16940-PA,
isoform A protein.
Length = 1032
Score = 27.9 bits (59), Expect = 4.6
Identities = 10/14 (71%), Positives = 12/14 (85%)
Frame = -1
Query: 84 LMHILERNCNGNCI 43
L HILE +CNG+CI
Sbjct: 480 LAHILETDCNGHCI 493
>AE014296-42|AAN11425.1| 1044|Drosophila melanogaster CG16940-PC,
isoform C protein.
Length = 1044
Score = 27.9 bits (59), Expect = 4.6
Identities = 10/14 (71%), Positives = 12/14 (85%)
Frame = -1
Query: 84 LMHILERNCNGNCI 43
L HILE +CNG+CI
Sbjct: 492 LAHILETDCNGHCI 505
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,561,234
Number of Sequences: 53049
Number of extensions: 276514
Number of successful extensions: 456
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 454
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 456
length of database: 24,988,368
effective HSP length: 77
effective length of database: 20,903,595
effective search space used: 1003372560
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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