Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV32607
(388 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC794.09c |ef1a-a||translation elongation factor EF-1 alpha Ef... 215 3e-57
SPAC23A1.10 |ef1a-b||translation elongation factor EF-1 alpha Ef... 214 4e-57
SPBC839.15c |ef1a-c||translation elongation factor EF-1 alpha Ef... 214 4e-57
SPBC25B2.01 ||SPBC2G5.08|elongation factor 1 alpha related prote... 122 2e-29
SPCC584.04 |sup35|erf3|translation release factor eRF3 |Schizosa... 114 4e-27
SPBC9B6.04c |tuf1||mitochondrial translation elongation factor E... 72 3e-14
SPBC660.10 |||translation elongation factor G|Schizosaccharomyce... 52 3e-08
SPAC1B3.04c |||mitochondrial GTPase Guf1 |Schizosaccharomyces po... 42 3e-05
SPBC1306.01c ||SPBC409.22c|translation elongation factor G|Schiz... 41 6e-05
SPCP31B10.07 |eft202||translation elongation factor 2 |Schizosac... 41 8e-05
SPAC513.01c |eft201|eft2-1, etf2, SPAPYUK71.04c|translation elon... 41 8e-05
SPBC1271.15c |||translation initiation factor IF-2Mt|Schizosacch... 30 0.013
SPAC56F8.03 |||translation initiation factor IF2 |Schizosaccharo... 32 0.036
SPAC9G1.11c |spn4||septin Spn4|Schizosaccharomyces pombe|chr 1||... 30 0.15
SPAPYUG7.03c |mid2||anillin homologue Mid2|Schizosaccharomyces p... 29 0.19
SPBC17G9.09 |tif213||translation initiation factor eIF2 gamma su... 28 0.44
SPCC553.08c |||GTPase Ria1 |Schizosaccharomyces pombe|chr 3|||Ma... 28 0.44
SPCC63.03 |||DNAJ domain protein, DNAJC11 family|Schizosaccharom... 27 1.4
SPBC215.12 |cwf10|spef2, snu114|GTPase Cwf10 |Schizosaccharomyce... 26 2.4
SPAC1D4.11c |lkh1|kic1|dual specificity protein kinase Lkh1|Schi... 26 2.4
SPBC1703.06 |pof10||F-box protein Pof10|Schizosaccharomyces pomb... 25 3.1
SPBC1703.13c |||inorganic phosphate transporter |Schizosaccharom... 25 4.1
SPBC26H8.08c |grn1||GTPase Grn1 |Schizosaccharomyces pombe|chr 2... 25 5.5
SPAC1687.08 |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 25 5.5
SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual 24 7.2
SPBC12C2.11 ||SPBC21D10.02|glutamine-fructose-6-phosphate transa... 24 9.6
>SPCC794.09c |ef1a-a||translation elongation factor EF-1 alpha
Ef1a-a |Schizosaccharomyces pombe|chr 3|||Manual
Length = 460
Score = 215 bits (524), Expect = 3e-57
Identities = 99/108 (91%), Positives = 103/108 (95%)
Frame = +2
Query: 65 LTLSVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAER 244
+ + VIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEA E+GKGSFKYAWVLDKLKAER
Sbjct: 8 INVVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEATELGKGSFKYAWVLDKLKAER 67
Query: 245 ERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLI 388
ERGITIDIALWKFET KY VT+IDAPGHRDFIKNMITGTSQADCAVLI
Sbjct: 68 ERGITIDIALWKFETPKYNVTVIDAPGHRDFIKNMITGTSQADCAVLI 115
Score = 23.8 bits (49), Expect = 9.6
Identities = 9/11 (81%), Positives = 10/11 (90%)
Frame = +1
Query: 43 MGKEKTHINIV 75
MGKEK HIN+V
Sbjct: 1 MGKEKGHINVV 11
>SPAC23A1.10 |ef1a-b||translation elongation factor EF-1 alpha
Ef1a-b |Schizosaccharomyces pombe|chr 1|||Manual
Length = 460
Score = 214 bits (523), Expect = 4e-57
Identities = 98/108 (90%), Positives = 103/108 (95%)
Frame = +2
Query: 65 LTLSVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAER 244
+ + VIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEA E+GKGSFKYAWVLDKLKAER
Sbjct: 8 INVVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEATELGKGSFKYAWVLDKLKAER 67
Query: 245 ERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLI 388
ERGITIDIALWKFET KY VT+IDAPGHRDFIKNMITGTSQADCA+LI
Sbjct: 68 ERGITIDIALWKFETPKYNVTVIDAPGHRDFIKNMITGTSQADCAILI 115
Score = 23.8 bits (49), Expect = 9.6
Identities = 9/11 (81%), Positives = 10/11 (90%)
Frame = +1
Query: 43 MGKEKTHINIV 75
MGKEK HIN+V
Sbjct: 1 MGKEKGHINVV 11
>SPBC839.15c |ef1a-c||translation elongation factor EF-1 alpha
Ef1a-c |Schizosaccharomyces pombe|chr 2|||Manual
Length = 460
Score = 214 bits (523), Expect = 4e-57
Identities = 98/108 (90%), Positives = 103/108 (95%)
Frame = +2
Query: 65 LTLSVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAER 244
+ + VIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEA E+GKGSFKYAWVLDKLKAER
Sbjct: 8 INVVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEATELGKGSFKYAWVLDKLKAER 67
Query: 245 ERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLI 388
ERGITIDIALWKFET KY VT+IDAPGHRDFIKNMITGTSQADCA+LI
Sbjct: 68 ERGITIDIALWKFETPKYNVTVIDAPGHRDFIKNMITGTSQADCAILI 115
Score = 23.8 bits (49), Expect = 9.6
Identities = 9/11 (81%), Positives = 10/11 (90%)
Frame = +1
Query: 43 MGKEKTHINIV 75
MGKEK HIN+V
Sbjct: 1 MGKEKGHINVV 11
>SPBC25B2.01 ||SPBC2G5.08|elongation factor 1 alpha related
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 592
Score = 122 bits (294), Expect = 2e-29
Identities = 57/106 (53%), Positives = 72/106 (67%)
Frame = +2
Query: 71 LSVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERER 250
L V GHVDSGKST G ++++ G I+ R+++K EA GKGSF YAW+LD + ER R
Sbjct: 180 LVVTGHVDSGKSTMLGRIMFELGEINSRSMQKLHNEAANSGKGSFSYAWLLDTTEEERAR 239
Query: 251 GITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLI 388
G+T+D+A FE+ K I DAPGHRDFI MI G S AD AVL+
Sbjct: 240 GVTMDVASTTFESDKKIYEIGDAPGHRDFISGMIAGASSADFAVLV 285
>SPCC584.04 |sup35|erf3|translation release factor eRF3
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 662
Score = 114 bits (275), Expect = 4e-27
Identities = 50/103 (48%), Positives = 72/103 (69%)
Frame = +2
Query: 80 IGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGIT 259
IGHVD+GKST G++++ G +DKRT+EK E+EA+E GK S+ +W LD ERE+G T
Sbjct: 244 IGHVDAGKSTLGGNILFLTGMVDKRTMEKIEREAKEAGKESWYLSWALDSTSEEREKGKT 303
Query: 260 IDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLI 388
+++ FET +++DAPGH+ ++ NMI G SQAD VL+
Sbjct: 304 VEVGRAYFETEHRRFSLLDAPGHKGYVTNMINGASQADIGVLV 346
>SPBC9B6.04c |tuf1||mitochondrial translation elongation factor
EF-Tu Tuf1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 439
Score = 72.1 bits (169), Expect = 3e-14
Identities = 42/115 (36%), Positives = 62/115 (53%)
Frame = +2
Query: 44 WARKRLTLTLSVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 223
+ RK+ + + IGHVD GK+T T I KC ++G+ SF +
Sbjct: 47 FVRKKPHVNIGTIGHVDHGKTTLTA-AITKC--------------LSDLGQASFMDYSQI 91
Query: 224 DKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLI 388
DK E+ RGITI A ++ET+ + +D PGH D+IKNMITG + D A+++
Sbjct: 92 DKAPEEKARGITISSAHVEYETANRHYAHVDCPGHADYIKNMITGAATMDGAIIV 146
>SPBC660.10 |||translation elongation factor G|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 813
Score = 52.0 bits (119), Expect = 3e-08
Identities = 35/106 (33%), Positives = 50/106 (47%)
Frame = +2
Query: 71 LSVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERER 250
+ +I H+D+GK+T T ++Y G F + G V+D L AER+R
Sbjct: 31 VGIIAHIDAGKTTLTEKMLYYGG---------FTSHFGNVDTGDT----VMDYLPAERQR 77
Query: 251 GITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLI 388
GITI+ A F + +ID PGH DF + + D AV I
Sbjct: 78 GITINSAAISFTWRNQRINLIDTPGHADFTFEVERSVAVLDGAVAI 123
>SPAC1B3.04c |||mitochondrial GTPase Guf1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 646
Score = 42.3 bits (95), Expect = 3e-05
Identities = 30/109 (27%), Positives = 51/109 (46%), Gaps = 4/109 (3%)
Frame = +2
Query: 74 SVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERG 253
+VI H+D GKST + ++ G I++ + F LDKL+ ER RG
Sbjct: 62 AVIAHIDHGKSTLSDCILKLTGVINEHNF-----------RNQF-----LDKLEVERRRG 105
Query: 254 ITIDIA----LWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLI 388
IT+ ++ + Y + +ID PGH DF ++ + + +L+
Sbjct: 106 ITVKAQTCSMIYYYHGQSYLLNLIDTPGHVDFRAEVMHSLAACEGCILL 154
>SPBC1306.01c ||SPBC409.22c|translation elongation factor
G|Schizosaccharomyces pombe|chr 2|||Manual
Length = 770
Score = 41.1 bits (92), Expect = 6e-05
Identities = 42/137 (30%), Positives = 61/137 (44%), Gaps = 19/137 (13%)
Frame = +2
Query: 35 NQKWARKRLTLTLSVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYA 214
N K K++ + + H+DSGK+T T ++Y G I K+ E+ +G
Sbjct: 51 NDKKRLKQIR-NIGISAHIDSGKTTFTERVLYYTGRI---------KDIHEV-RGKDNVG 99
Query: 215 WVLDKLKAERERGITIDIA----LWK---------------FETSKYYVTIIDAPGHRDF 337
+D ++ ERE+GITI A W+ FE S Y + IID PGH DF
Sbjct: 100 AKMDFMELEREKGITIQSAATHCTWERTVDQIEANEKQKTDFEKS-YNINIIDTPGHIDF 158
Query: 338 IKNMITGTSQADCAVLI 388
+ D AVL+
Sbjct: 159 TIEVERALRVLDGAVLV 175
>SPCP31B10.07 |eft202||translation elongation factor 2
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 842
Score = 40.7 bits (91), Expect = 8e-05
Identities = 34/109 (31%), Positives = 51/109 (46%), Gaps = 3/109 (2%)
Frame = +2
Query: 71 LSVIGHVDSGKSTTTGHLIYKCGGID--KRTIEKF-EKEAQEMGKGSFKYAWVLDKLKAE 241
+SVI HVD GKST T L+ K G I K +F + A E +G + + L AE
Sbjct: 22 MSVIAHVDHGKSTLTDSLVQKAGIISAAKAGDARFMDTRADEQERGVTIKSTAI-SLFAE 80
Query: 242 RERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLI 388
D+ + + + V +ID+PGH DF + D A+++
Sbjct: 81 MTDDDMKDMK-EPADGTDFLVNLIDSPGHVDFSSEVTAALRVTDGALVV 128
>SPAC513.01c |eft201|eft2-1, etf2, SPAPYUK71.04c|translation
elongation factor 2 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 842
Score = 40.7 bits (91), Expect = 8e-05
Identities = 34/109 (31%), Positives = 51/109 (46%), Gaps = 3/109 (2%)
Frame = +2
Query: 71 LSVIGHVDSGKSTTTGHLIYKCGGID--KRTIEKF-EKEAQEMGKGSFKYAWVLDKLKAE 241
+SVI HVD GKST T L+ K G I K +F + A E +G + + L AE
Sbjct: 22 MSVIAHVDHGKSTLTDSLVQKAGIISAAKAGDARFMDTRADEQERGVTIKSTAI-SLFAE 80
Query: 242 RERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLI 388
D+ + + + V +ID+PGH DF + D A+++
Sbjct: 81 MTDDDMKDMK-EPADGTDFLVNLIDSPGHVDFSSEVTAALRVTDGALVV 128
>SPBC1271.15c |||translation initiation factor
IF-2Mt|Schizosaccharomyces pombe|chr 2|||Manual
Length = 686
Score = 30.3 bits (65), Expect(2) = 0.013
Identities = 19/68 (27%), Positives = 30/68 (44%), Gaps = 2/68 (2%)
Frame = +2
Query: 191 GKGSFKYAWVLDKLKAERERGITIDIALWK--FETSKYYVTIIDAPGHRDFIKNMITGTS 364
GK + A+ + + GIT I + F+ ++T +D PGH F G +
Sbjct: 183 GKTTLLDAFRKSTIASTEHGGITQKIGAFTVPFDKGSKFITFLDTPGHMAFEAMRKRGAN 242
Query: 365 QADCAVLI 388
AD VL+
Sbjct: 243 IADIVVLV 250
Score = 21.8 bits (44), Expect(2) = 0.013
Identities = 7/13 (53%), Positives = 12/13 (92%)
Frame = +2
Query: 71 LSVIGHVDSGKST 109
++++GHVD GK+T
Sbjct: 174 VTLMGHVDHGKTT 186
>SPAC56F8.03 |||translation initiation factor IF2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1079
Score = 31.9 bits (69), Expect = 0.036
Identities = 27/106 (25%), Positives = 47/106 (44%), Gaps = 2/106 (1%)
Frame = +2
Query: 77 VIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEA--QEMGKGSFKYAWVLDKLKAERER 250
++GHVD+GK+ +L + +++ E Q++G F + K K ++
Sbjct: 489 ILGHVDTGKTKLLDNL-------RRSNVQEGEAGGITQQIGATYFPIESIKQKTKVVNKK 541
Query: 251 GITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLI 388
G K + + + IID PGH F GTS + A+L+
Sbjct: 542 G--------KLQYNIPGLLIIDTPGHESFTNLRSRGTSLCNIAILV 579
>SPAC9G1.11c |spn4||septin Spn4|Schizosaccharomyces pombe|chr
1|||Manual
Length = 380
Score = 29.9 bits (64), Expect = 0.15
Identities = 15/44 (34%), Positives = 27/44 (61%), Gaps = 3/44 (6%)
Frame = +2
Query: 224 DKLKAER-ERGITIDIALWKFETSKYYV--TIIDAPGHRDFIKN 346
+K++A+ E+ + I+I + E +++ T+ID PG DFI N
Sbjct: 60 EKVRAKHAEKTVEIEITKAELEEKNFHLRLTVIDTPGFGDFINN 103
>SPAPYUG7.03c |mid2||anillin homologue Mid2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 704
Score = 29.5 bits (63), Expect = 0.19
Identities = 14/43 (32%), Positives = 23/43 (53%)
Frame = -2
Query: 261 IVIPRSRSAFSLSNTQAYLKDPLPISWASFSNFSMVRLSIPPH 133
I IP+ A S+ N++ + +D LP + S V+L +P H
Sbjct: 171 IPIPKKNPARSVCNSKLFNEDTLPAEFEEVSISPPVKLELPTH 213
>SPBC17G9.09 |tif213||translation initiation factor eIF2 gamma
subunit|Schizosaccharomyces pombe|chr 2|||Manual
Length = 446
Score = 28.3 bits (60), Expect = 0.44
Identities = 10/30 (33%), Positives = 18/30 (60%)
Frame = +2
Query: 299 YVTIIDAPGHRDFIKNMITGTSQADCAVLI 388
+V+ +D PGH + M+ G + D A+L+
Sbjct: 109 HVSFVDCPGHDILMATMLNGAAVMDAALLL 138
>SPCC553.08c |||GTPase Ria1 |Schizosaccharomyces pombe|chr
3|||Manual
Length = 1000
Score = 28.3 bits (60), Expect = 0.44
Identities = 26/108 (24%), Positives = 45/108 (41%), Gaps = 3/108 (2%)
Frame = +2
Query: 74 SVIGHVDSGKSTTTGHLIYKCGGIDKR---TIEKFEKEAQEMGKGSFKYAWVLDKLKAER 244
+++ HVD GK+T L+ G I + T+ + E+ +G + K A
Sbjct: 23 TLLAHVDHGKTTLADSLLASNGIISSKLAGTVRFLDFREDEITRG------ITMKSSAIS 76
Query: 245 ERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLI 388
I K Y + +ID+PGH DF + + + D A ++
Sbjct: 77 LFFKVISQNDEKRVEKDYLINLIDSPGHVDFSSEVSSASRLCDGAFVL 124
>SPCC63.03 |||DNAJ domain protein, DNAJC11
family|Schizosaccharomyces pombe|chr 3|||Manual
Length = 642
Score = 26.6 bits (56), Expect = 1.4
Identities = 16/44 (36%), Positives = 22/44 (50%)
Frame = -2
Query: 285 SNFQRAISIVIPRSRSAFSLSNTQAYLKDPLPISWASFSNFSMV 154
S F IS+ +P FSL+ ++ K LPI W S + S V
Sbjct: 403 STFGVNISVGVPTGSITFSLNWSRLGQKISLPIMWCSVFDRSAV 446
>SPBC215.12 |cwf10|spef2, snu114|GTPase Cwf10 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 983
Score = 25.8 bits (54), Expect = 2.4
Identities = 16/55 (29%), Positives = 27/55 (49%), Gaps = 5/55 (9%)
Frame = +2
Query: 239 ERERGITID-----IALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLI 388
ERER ++I +A+ + + ID PGH DF+ + + +D VL+
Sbjct: 185 ERERVMSIKSTPLTLAVSDMKGKTFAFQCIDTPGHVDFVDEVAAPMAISDGVVLV 239
>SPAC1D4.11c |lkh1|kic1|dual specificity protein kinase
Lkh1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 690
Score = 25.8 bits (54), Expect = 2.4
Identities = 13/33 (39%), Positives = 16/33 (48%)
Frame = -3
Query: 251 HAHAQPLVCPIPKHI*RILYPFPGPPSRTSRWY 153
H+H PL P+P +L P P P S WY
Sbjct: 135 HSHHPPLHNPLPVSCQPVLRP-PPVPQVPSHWY 166
>SPBC1703.06 |pof10||F-box protein Pof10|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 662
Score = 25.4 bits (53), Expect = 3.1
Identities = 15/43 (34%), Positives = 19/43 (44%)
Frame = -3
Query: 230 VCPIPKHI*RILYPFPGPPSRTSRWYVCQYHHICRSSDQWWWT 102
V +PK I I++ F P S S C+Y S D W T
Sbjct: 31 VLNLPKEILIIIFSFLDPRSLLSAQCTCKYWKKLLSDDLSWRT 73
>SPBC1703.13c |||inorganic phosphate transporter
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 311
Score = 25.0 bits (52), Expect = 4.1
Identities = 8/19 (42%), Positives = 12/19 (63%)
Frame = -3
Query: 185 PGPPSRTSRWYVCQYHHIC 129
P PP +T + Y QY+ +C
Sbjct: 8 PAPPKKTLQLYTPQYYGLC 26
>SPBC26H8.08c |grn1||GTPase Grn1 |Schizosaccharomyces pombe|chr
2|||Manual
Length = 470
Score = 24.6 bits (51), Expect = 5.5
Identities = 14/42 (33%), Positives = 27/42 (64%)
Frame = +2
Query: 2 SDITRSL*SVTNQKWARKRLTLTLSVIGHVDSGKSTTTGHLI 127
S++ +SL S + +K + + +LT+ VIG+ + GKS+ L+
Sbjct: 251 SNLLKSLKSYSAKK--KLKSSLTVGVIGYPNVGKSSVINALV 290
>SPAC1687.08 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 96
Score = 24.6 bits (51), Expect = 5.5
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = -1
Query: 355 CDHVLDEISVSRSINDGNIVLASFEL 278
CDH+L IS SR G + FEL
Sbjct: 23 CDHLLQYISNSRDSKAGLKIFLVFEL 48
>SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual
Length = 4717
Score = 24.2 bits (50), Expect = 7.2
Identities = 10/28 (35%), Positives = 16/28 (57%), Gaps = 1/28 (3%)
Frame = +1
Query: 61 HINIVRHRTRRLRQVHHHWS-LDLQMWW 141
HIN V T + ++H WS +D +W+
Sbjct: 20 HINYVPSNTLQRLRLHQPWSKIDYDVWF 47
>SPBC12C2.11 ||SPBC21D10.02|glutamine-fructose-6-phosphate
transaminase |Schizosaccharomyces pombe|chr 2|||Manual
Length = 696
Score = 23.8 bits (49), Expect = 9.6
Identities = 15/44 (34%), Positives = 21/44 (47%)
Frame = +2
Query: 80 IGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKY 211
I HV G+ L + GG RTIE E E + KG++ +
Sbjct: 297 IAHVRDGE-LHVHRLRREGGGSTTRTIETLEMEIASVMKGNYDH 339
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,598,663
Number of Sequences: 5004
Number of extensions: 30780
Number of successful extensions: 125
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 109
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 120
length of database: 2,362,478
effective HSP length: 65
effective length of database: 2,037,218
effective search space used: 128344734
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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