Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV32607
(388 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U51994-9|AAO21383.1| 267|Caenorhabditis elegans Elongation fact... 224 1e-59
U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation fact... 224 1e-59
U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation fact... 224 1e-59
U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation fact... 224 1e-59
Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical pr... 142 1e-34
Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical pr... 142 1e-34
Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical pr... 120 3e-28
U51994-8|AAO21382.1| 77|Caenorhabditis elegans Elongation fact... 120 4e-28
U80437-9|AAN84843.1| 439|Caenorhabditis elegans Tu elongation f... 66 1e-11
AB010028-1|BAA31345.1| 439|Caenorhabditis elegans mitochondrial... 66 1e-11
D38472-1|BAA07492.1| 495|Caenorhabditis elegans elongation fact... 63 8e-11
D38471-1|BAA07491.1| 496|Caenorhabditis elegans elongation fact... 63 8e-11
AC024859-25|AAK29979.1| 496|Caenorhabditis elegans Tu elongatio... 63 8e-11
AC006714-2|AAK29716.2| 689|Caenorhabditis elegans Hypothetical ... 53 6e-08
Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical pr... 52 2e-07
L13200-4|AAA28191.2| 645|Caenorhabditis elegans Hypothetical pr... 48 2e-06
M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation fact... 46 1e-05
Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical pr... 45 2e-05
Z70780-15|CAA94822.2| 702|Caenorhabditis elegans Hypothetical p... 32 0.012
Z83235-9|CAI79209.1| 705|Caenorhabditis elegans Hypothetical pr... 33 0.070
Z83235-8|CAB05774.2| 894|Caenorhabditis elegans Hypothetical pr... 33 0.070
Z66513-12|CAI46602.1| 492|Caenorhabditis elegans Hypothetical p... 29 0.86
Z66513-11|CAA91332.3| 427|Caenorhabditis elegans Hypothetical p... 29 0.86
Z99709-7|CAB16862.2| 500|Caenorhabditis elegans Hypothetical pr... 29 1.1
Z99709-6|CAB16863.1| 459|Caenorhabditis elegans Hypothetical pr... 29 1.1
U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation fact... 29 1.1
M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein. 29 1.1
DQ867020-1|ABI49097.1| 1074|Caenorhabditis elegans eukaryotic tr... 28 2.0
Z74473-4|CAA98953.1| 390|Caenorhabditis elegans Hypothetical pr... 28 2.6
AC025716-9|AAK39619.1| 469|Caenorhabditis elegans Hypothetical ... 27 3.5
Z75710-2|CAB00025.2| 381|Caenorhabditis elegans Hypothetical pr... 27 4.6
Z78200-2|CAB01578.1| 588|Caenorhabditis elegans Hypothetical pr... 27 6.1
Z73973-4|CAE54908.1| 367|Caenorhabditis elegans Hypothetical pr... 26 8.1
Z73973-3|CAA98265.1| 468|Caenorhabditis elegans Hypothetical pr... 26 8.1
>U51994-9|AAO21383.1| 267|Caenorhabditis elegans Elongation factor
protein 4, isoformc protein.
Length = 267
Score = 224 bits (548), Expect = 1e-59
Identities = 101/113 (89%), Positives = 110/113 (97%)
Frame = +2
Query: 50 RKRLTLTLSVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK 229
++++ + + VIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK
Sbjct: 3 KEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK 62
Query: 230 LKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLI 388
LKAERERGITIDIALWKFET+KYY+TIIDAPGHRDFIKNMITGTSQADCAVL+
Sbjct: 63 LKAERERGITIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLV 115
>U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation factor
protein 4, isoformd protein.
Length = 429
Score = 224 bits (548), Expect = 1e-59
Identities = 101/113 (89%), Positives = 110/113 (97%)
Frame = +2
Query: 50 RKRLTLTLSVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK 229
++++ + + VIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK
Sbjct: 3 KEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK 62
Query: 230 LKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLI 388
LKAERERGITIDIALWKFET+KYY+TIIDAPGHRDFIKNMITGTSQADCAVL+
Sbjct: 63 LKAERERGITIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLV 115
>U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation factor
protein 4, isoforma protein.
Length = 463
Score = 224 bits (548), Expect = 1e-59
Identities = 101/113 (89%), Positives = 110/113 (97%)
Frame = +2
Query: 50 RKRLTLTLSVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK 229
++++ + + VIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK
Sbjct: 3 KEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK 62
Query: 230 LKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLI 388
LKAERERGITIDIALWKFET+KYY+TIIDAPGHRDFIKNMITGTSQADCAVL+
Sbjct: 63 LKAERERGITIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLV 115
>U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation factor
protein 3 protein.
Length = 463
Score = 224 bits (548), Expect = 1e-59
Identities = 101/113 (89%), Positives = 110/113 (97%)
Frame = +2
Query: 50 RKRLTLTLSVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK 229
++++ + + VIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK
Sbjct: 3 KEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK 62
Query: 230 LKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLI 388
LKAERERGITIDIALWKFET+KYY+TIIDAPGHRDFIKNMITGTSQADCAVL+
Sbjct: 63 LKAERERGITIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLV 115
>Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical
protein K07A12.4b protein.
Length = 592
Score = 142 bits (343), Expect = 1e-34
Identities = 63/108 (58%), Positives = 81/108 (75%)
Frame = +2
Query: 65 LTLSVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAER 244
+ L V+GHVD+GKST GHL++ +D RTI+KF+ EA GK SF YAWVLD+ + ER
Sbjct: 171 INLIVVGHVDAGKSTLMGHLLHDLEVVDSRTIDKFKHEAARNGKASFAYAWVLDETEEER 230
Query: 245 ERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLI 388
ERG+T+DI FETS + ++DAPGH+DFI NMITGTSQAD A+L+
Sbjct: 231 ERGVTMDIGRTSFETSHRRIVLLDAPGHKDFISNMITGTSQADAAILV 278
>Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical
protein K07A12.4a protein.
Length = 610
Score = 142 bits (343), Expect = 1e-34
Identities = 63/108 (58%), Positives = 81/108 (75%)
Frame = +2
Query: 65 LTLSVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAER 244
+ L V+GHVD+GKST GHL++ +D RTI+KF+ EA GK SF YAWVLD+ + ER
Sbjct: 189 INLIVVGHVDAGKSTLMGHLLHDLEVVDSRTIDKFKHEAARNGKASFAYAWVLDETEEER 248
Query: 245 ERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLI 388
ERG+T+DI FETS + ++DAPGH+DFI NMITGTSQAD A+L+
Sbjct: 249 ERGVTMDIGRTSFETSHRRIVLLDAPGHKDFISNMITGTSQADAAILV 296
>Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical
protein H19N07.1 protein.
Length = 532
Score = 120 bits (290), Expect = 3e-28
Identities = 52/108 (48%), Positives = 77/108 (71%)
Frame = +2
Query: 65 LTLSVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAER 244
+ + +GHVD+GKST G L++ G +DKRT+EK+E+EA+E G+ S+ +W +D ER
Sbjct: 110 INMVFVGHVDAGKSTIGGQLMFLTGMVDKRTLEKYEREAKEKGRESWYLSWCMDTNDEER 169
Query: 245 ERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLI 388
E+G T+++ FET K + TI+DAPGH+ F+ NMI G +QAD AVL+
Sbjct: 170 EKGKTVEVGRAYFETEKRHFTILDAPGHKSFVPNMIVGANQADLAVLV 217
>U51994-8|AAO21382.1| 77|Caenorhabditis elegans Elongation factor
protein 4, isoformb protein.
Length = 77
Score = 120 bits (289), Expect = 4e-28
Identities = 53/65 (81%), Positives = 60/65 (92%)
Frame = +2
Query: 50 RKRLTLTLSVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK 229
++++ + + VIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK
Sbjct: 3 KEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK 62
Query: 230 LKAER 244
LK +
Sbjct: 63 LKVTK 67
>U80437-9|AAN84843.1| 439|Caenorhabditis elegans Tu elongation
factor (ef-tu), mitochondrialprotein 2 protein.
Length = 439
Score = 65.7 bits (153), Expect = 1e-11
Identities = 46/131 (35%), Positives = 68/131 (51%), Gaps = 2/131 (1%)
Frame = +2
Query: 2 SDITRSL*SVTNQKWARKRLTLTLSVIGHVDSGKSTTTGHL--IYKCGGIDKRTIEKFEK 175
+ ITR+ + A ++ + + IGH+D GK+T T + + G K KF++
Sbjct: 25 NSITRNAVAFFATAAATPKINVNVGTIGHIDHGKTTLTSAITRVQAKKGFAKHI--KFDE 82
Query: 176 EAQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMIT 355
+DK K E++RGITI++A +E+ + D PGH DFIKNMI
Sbjct: 83 ---------------IDKGKEEKKRGITINVAHIGYESPLRRYSHTDCPGHSDFIKNMIC 127
Query: 356 GTSQADCAVLI 388
GTSQ D AVL+
Sbjct: 128 GTSQMDVAVLV 138
>AB010028-1|BAA31345.1| 439|Caenorhabditis elegans mitochondrial
elongation factorTu homologue protein.
Length = 439
Score = 65.7 bits (153), Expect = 1e-11
Identities = 46/131 (35%), Positives = 68/131 (51%), Gaps = 2/131 (1%)
Frame = +2
Query: 2 SDITRSL*SVTNQKWARKRLTLTLSVIGHVDSGKSTTTGHL--IYKCGGIDKRTIEKFEK 175
+ ITR+ + A ++ + + IGH+D GK+T T + + G K KF++
Sbjct: 25 NSITRNAVAFFATAAATPKINVNVGTIGHIDHGKTTLTSAITRVQAKKGFAKHI--KFDE 82
Query: 176 EAQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMIT 355
+DK K E++RGITI++A +E+ + D PGH DFIKNMI
Sbjct: 83 ---------------IDKGKEEKKRGITINVAHIGYESPLRRYSHTDCPGHSDFIKNMIC 127
Query: 356 GTSQADCAVLI 388
GTSQ D AVL+
Sbjct: 128 GTSQMDVAVLV 138
>D38472-1|BAA07492.1| 495|Caenorhabditis elegans elongation factor
Tu homologueprecursor protein.
Length = 495
Score = 62.9 bits (146), Expect = 8e-11
Identities = 39/113 (34%), Positives = 56/113 (49%)
Frame = +2
Query: 50 RKRLTLTLSVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK 229
R + L + IGHVD GK+T T + K+E +D
Sbjct: 45 RDKPHLNVGTIGHVDHGKTTLTSAITKILATSKGAKYRKYED---------------IDN 89
Query: 230 LKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLI 388
E+ RGITI+ ++ET+K + ID PGH D+IKNMITG +Q + A+L+
Sbjct: 90 APEEKARGITINAFHLEYETAKRHYAHIDCPGHADYIKNMITGAAQMEGAILV 142
>D38471-1|BAA07491.1| 496|Caenorhabditis elegans elongation factor
Tu homologueprecursor protein.
Length = 496
Score = 62.9 bits (146), Expect = 8e-11
Identities = 39/113 (34%), Positives = 56/113 (49%)
Frame = +2
Query: 50 RKRLTLTLSVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK 229
R + L + IGHVD GK+T T + K+E +D
Sbjct: 46 RDKPHLNVGTIGHVDHGKTTLTSAITKILATSKGAKYRKYED---------------IDN 90
Query: 230 LKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLI 388
E+ RGITI+ ++ET+K + ID PGH D+IKNMITG +Q + A+L+
Sbjct: 91 APEEKARGITINAFHLEYETAKRHYAHIDCPGHADYIKNMITGAAQMEGAILV 143
>AC024859-25|AAK29979.1| 496|Caenorhabditis elegans Tu elongation
factor (ef-tu), mitochondrialprotein 1 protein.
Length = 496
Score = 62.9 bits (146), Expect = 8e-11
Identities = 39/113 (34%), Positives = 56/113 (49%)
Frame = +2
Query: 50 RKRLTLTLSVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK 229
R + L + IGHVD GK+T T + K+E +D
Sbjct: 46 RDKPHLNVGTIGHVDHGKTTLTSAITKILATSKGAKYRKYED---------------IDN 90
Query: 230 LKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLI 388
E+ RGITI+ ++ET+K + ID PGH D+IKNMITG +Q + A+L+
Sbjct: 91 APEEKARGITINAFHLEYETAKRHYAHIDCPGHADYIKNMITGAAQMEGAILV 143
>AC006714-2|AAK29716.2| 689|Caenorhabditis elegans Hypothetical
protein Y119D3B.14 protein.
Length = 689
Score = 53.2 bits (122), Expect = 6e-08
Identities = 34/89 (38%), Positives = 45/89 (50%)
Frame = +2
Query: 71 LSVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERER 250
+ VI HVD+GK+T T L+Y G I A + KG+ V D L ERER
Sbjct: 28 IGVIAHVDAGKTTVTERLLYLAGAIHV---------AGHVDKGNT----VTDFLDIERER 74
Query: 251 GITIDIALWKFETSKYYVTIIDAPGHRDF 337
GIT+ A + + + +ID PGH DF
Sbjct: 75 GITVQSAAVNLDWKGHRINLIDTPGHVDF 103
>Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical
protein F29C12.4 protein.
Length = 750
Score = 51.6 bits (118), Expect = 2e-07
Identities = 34/106 (32%), Positives = 49/106 (46%)
Frame = +2
Query: 71 LSVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERER 250
+ + H+DSGK+T T ++Y G ID E+ +G +D + ER+R
Sbjct: 47 IGISAHIDSGKTTVTERILYYAGRIDSM---------HEV-RGKDDVGATMDFMDLERQR 96
Query: 251 GITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLI 388
GITI A + + IID PGH DF + D AVL+
Sbjct: 97 GITIQSAATYVDWHGTNINIIDTPGHVDFTVEVERALRVLDGAVLV 142
>L13200-4|AAA28191.2| 645|Caenorhabditis elegans Hypothetical
protein ZK1236.1 protein.
Length = 645
Score = 48.4 bits (110), Expect = 2e-06
Identities = 32/104 (30%), Positives = 47/104 (45%)
Frame = +2
Query: 77 VIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGI 256
++ HVD GKST L+ CG + +K+ +LDKL+ ERERGI
Sbjct: 47 IVAHVDHGKSTLADRLLEMCGAVPPG-----QKQ-------------MLDKLQVERERGI 88
Query: 257 TIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLI 388
T+ Y + +ID PGH DF + + D +L+
Sbjct: 89 TVKAQTAALRHRGYLLNLIDTPGHVDFSAEVSRSLAVCDGILLL 132
>M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation factor
protein.
Length = 852
Score = 45.6 bits (103), Expect = 1e-05
Identities = 38/126 (30%), Positives = 60/126 (47%), Gaps = 13/126 (10%)
Frame = +2
Query: 50 RKRLTLTLSVIGHVDSGKSTTTGHLIYKCGGI--DKRTIEKF---EKEAQE----MGKGS 202
RKR +SVI HVD GKST T L+ K G I K +F K+ QE + +
Sbjct: 15 RKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGSKAGETRFTDTRKDEQERCITIKSTA 74
Query: 203 FKYAWVLDKLKAERERG----ITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQA 370
+ L+K E +G T+++ K + + + + +ID+PGH DF +
Sbjct: 75 ISLFFELEKKDLEFVKGENQFETVEVDGKKEKYNGFLINLIDSPGHVDFSSEVTAALGVT 134
Query: 371 DCAVLI 388
D A+++
Sbjct: 135 DGALVV 140
>Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical
protein F25H5.4 protein.
Length = 852
Score = 45.2 bits (102), Expect = 2e-05
Identities = 38/126 (30%), Positives = 60/126 (47%), Gaps = 13/126 (10%)
Frame = +2
Query: 50 RKRLTLTLSVIGHVDSGKSTTTGHLIYKCGGI--DKRTIEKF---EKEAQE----MGKGS 202
RKR +SVI HVD GKST T L+ K G I K +F K+ QE + +
Sbjct: 15 RKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGSKAGETRFTDTRKDEQERCITIKSTA 74
Query: 203 FKYAWVLDKLKAERERG----ITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQA 370
+ L+K E +G T+++ K + + + + +ID+PGH DF +
Sbjct: 75 ISLFFELEKKDLEFVKGENQFETVEVDGKKEKYNGFLINLIDSPGHVDFSSEVTAALRVT 134
Query: 371 DCAVLI 388
D A+++
Sbjct: 135 DGALVV 140
>Z70780-15|CAA94822.2| 702|Caenorhabditis elegans Hypothetical
protein F46B6.6a protein.
Length = 702
Score = 31.9 bits (69), Expect(2) = 0.012
Identities = 22/67 (32%), Positives = 29/67 (43%), Gaps = 1/67 (1%)
Frame = +2
Query: 191 GKGSFKYAWVLDKLKAERERGITIDIALWKFETSK-YYVTIIDAPGHRDFIKNMITGTSQ 367
GK + A ++ A GIT I + E +K VT +D PGH F G
Sbjct: 168 GKTTLLDAMRNSQIAAGEFGGITQHIGAFSVELTKGRRVTFLDTPGHAAFASMRARGAKG 227
Query: 368 ADCAVLI 388
AD VL+
Sbjct: 228 ADIVVLV 234
Score = 22.6 bits (46), Expect(2) = 0.012
Identities = 7/13 (53%), Positives = 12/13 (92%)
Frame = +2
Query: 71 LSVIGHVDSGKST 109
++++GHVD GK+T
Sbjct: 159 VTIMGHVDHGKTT 171
>Z83235-9|CAI79209.1| 705|Caenorhabditis elegans Hypothetical
protein K10C3.5b protein.
Length = 705
Score = 33.1 bits (72), Expect = 0.070
Identities = 26/104 (25%), Positives = 45/104 (43%)
Frame = +2
Query: 77 VIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGI 256
++ HVD GK++ L+ I R G +Y +D + E+ RGI
Sbjct: 25 LVAHVDHGKTSFADSLVSANAVISSRMA------------GKLRY---MDSREDEQTRGI 69
Query: 257 TIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLI 388
T+ + + +ID+PGH DF + + +D A+L+
Sbjct: 70 TMKSSGISLLCEPLLINLIDSPGHVDFSGEVTSALILSDIALLL 113
>Z83235-8|CAB05774.2| 894|Caenorhabditis elegans Hypothetical
protein K10C3.5a protein.
Length = 894
Score = 33.1 bits (72), Expect = 0.070
Identities = 26/104 (25%), Positives = 45/104 (43%)
Frame = +2
Query: 77 VIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGI 256
++ HVD GK++ L+ I R G +Y +D + E+ RGI
Sbjct: 25 LVAHVDHGKTSFADSLVSANAVISSRMA------------GKLRY---MDSREDEQTRGI 69
Query: 257 TIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLI 388
T+ + + +ID+PGH DF + + +D A+L+
Sbjct: 70 TMKSSGISLLCEPLLINLIDSPGHVDFSGEVTSALILSDIALLL 113
>Z66513-12|CAI46602.1| 492|Caenorhabditis elegans Hypothetical
protein F54D5.5b protein.
Length = 492
Score = 29.5 bits (63), Expect = 0.86
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +2
Query: 146 DKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 247
+KR ++ EKE + F Y LDK+K ER+
Sbjct: 272 EKRKLKDMEKECNDAKNAMFHYMNQLDKVKKERD 305
>Z66513-11|CAA91332.3| 427|Caenorhabditis elegans Hypothetical
protein F54D5.5a protein.
Length = 427
Score = 29.5 bits (63), Expect = 0.86
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +2
Query: 146 DKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 247
+KR ++ EKE + F Y LDK+K ER+
Sbjct: 207 EKRKLKDMEKECNDAKNAMFHYMNQLDKVKKERD 240
>Z99709-7|CAB16862.2| 500|Caenorhabditis elegans Hypothetical
protein C47B2.7b protein.
Length = 500
Score = 29.1 bits (62), Expect = 1.1
Identities = 11/17 (64%), Positives = 14/17 (82%)
Frame = +2
Query: 65 LTLSVIGHVDSGKSTTT 115
L L ++GHVDSGK+T T
Sbjct: 14 LNLGILGHVDSGKTTLT 30
>Z99709-6|CAB16863.1| 459|Caenorhabditis elegans Hypothetical
protein C47B2.7a protein.
Length = 459
Score = 29.1 bits (62), Expect = 1.1
Identities = 11/17 (64%), Positives = 14/17 (82%)
Frame = +2
Query: 65 LTLSVIGHVDSGKSTTT 115
L L ++GHVDSGK+T T
Sbjct: 14 LNLGILGHVDSGKTTLT 30
>U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation factor
protein 1 protein.
Length = 974
Score = 29.1 bits (62), Expect = 1.1
Identities = 19/60 (31%), Positives = 27/60 (45%), Gaps = 5/60 (8%)
Frame = +2
Query: 224 DKLKAERERGITI-----DIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLI 388
D L E++RG +I I + Y + IID PGH +F M AD V++
Sbjct: 172 DILFIEKQRGCSIKSQPVSIVAQDSRSKSYLLNIIDTPGHVNFSDEMTASYRLADGVVVM 231
>M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein.
Length = 849
Score = 29.1 bits (62), Expect = 1.1
Identities = 19/60 (31%), Positives = 27/60 (45%), Gaps = 5/60 (8%)
Frame = +2
Query: 224 DKLKAERERGITI-----DIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLI 388
D L E++RG +I I + Y + IID PGH +F M AD V++
Sbjct: 47 DILFIEKQRGCSIKSQPVSIVAQDSRSKSYLLNIIDTPGHVNFSDEMTASYRLADGVVVM 106
>DQ867020-1|ABI49097.1| 1074|Caenorhabditis elegans eukaryotic
translation initiationfactor eIF5B protein.
Length = 1074
Score = 28.3 bits (60), Expect = 2.0
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = +2
Query: 308 IIDAPGHRDFIKNMITGTSQADCAVLI 388
IID PGH F G+S D A+L+
Sbjct: 553 IIDTPGHESFSNLRTRGSSLCDFAILV 579
>Z74473-4|CAA98953.1| 390|Caenorhabditis elegans Hypothetical
protein F56H9.4 protein.
Length = 390
Score = 27.9 bits (59), Expect = 2.6
Identities = 15/32 (46%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Frame = +2
Query: 50 RKRLTLTLSVIGHVDSGKSTTTGHL-IYKCGG 142
RK+ L L +IG +SGKST + I CGG
Sbjct: 40 RKKKALKLLIIGPGESGKSTIVKQVRILHCGG 71
>AC025716-9|AAK39619.1| 469|Caenorhabditis elegans Hypothetical
protein Y39G10AR.8 protein.
Length = 469
Score = 27.5 bits (58), Expect = 3.5
Identities = 10/30 (33%), Positives = 17/30 (56%)
Frame = +2
Query: 299 YVTIIDAPGHRDFIKNMITGTSQADCAVLI 388
+V+ +D PGH + M+ G + D A L+
Sbjct: 128 HVSFVDCPGHDILMATMLNGAAVMDAAFLL 157
>Z75710-2|CAB00025.2| 381|Caenorhabditis elegans Hypothetical
protein D1081.4 protein.
Length = 381
Score = 27.1 bits (57), Expect = 4.6
Identities = 14/25 (56%), Positives = 17/25 (68%), Gaps = 2/25 (8%)
Frame = +2
Query: 302 VTIIDAPGHRDFI--KNMITGTSQA 370
V IID+ G RDFI KN+ GT+ A
Sbjct: 73 VQIIDSSGSRDFIGMKNLYIGTADA 97
>Z78200-2|CAB01578.1| 588|Caenorhabditis elegans Hypothetical
protein T04H1.2 protein.
Length = 588
Score = 26.6 bits (56), Expect = 6.1
Identities = 32/106 (30%), Positives = 45/106 (42%), Gaps = 6/106 (5%)
Frame = +2
Query: 59 LTLTLSVIGHVDSGKSTTTGHLIYKC--GGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKL 232
+ + L+V+G D GKST G L C G K I F + E+ G K + V + +
Sbjct: 167 IEVRLAVVGGCDVGKSTLCGVLTQGCLDDGNGKARIGIF-RFPHEVRTG--KTSSVCNDV 223
Query: 233 KAERERGITIDIALWKF----ETSKYYVTIIDAPGHRDFIKNMITG 358
RG ++ A E S VT+ID G + K I G
Sbjct: 224 IGFDNRGKLVNYAQNSLEEMVEKSSKLVTLIDLAGDAKYQKTTIHG 269
>Z73973-4|CAE54908.1| 367|Caenorhabditis elegans Hypothetical
protein F25D1.1b protein.
Length = 367
Score = 26.2 bits (55), Expect = 8.1
Identities = 16/36 (44%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = -1
Query: 367 LRGSCDHVLDEISVSRSINDGNIVLASF-ELPESNI 263
LR CD VLDE V S ++ +V+ F PE NI
Sbjct: 253 LREVCDDVLDECLVKGSRDNMTMVVVCFPAAPEVNI 288
>Z73973-3|CAA98265.1| 468|Caenorhabditis elegans Hypothetical
protein F25D1.1a protein.
Length = 468
Score = 26.2 bits (55), Expect = 8.1
Identities = 16/36 (44%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = -1
Query: 367 LRGSCDHVLDEISVSRSINDGNIVLASF-ELPESNI 263
LR CD VLDE V S ++ +V+ F PE NI
Sbjct: 354 LREVCDDVLDECLVKGSRDNMTMVVVCFPAAPEVNI 389
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,121,375
Number of Sequences: 27780
Number of extensions: 181922
Number of successful extensions: 562
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 529
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 558
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 576961812
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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