Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV32589
(710 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC1093.03 |||inositol polyphosphate phosphatase |Schizosacchar... 102 4e-23
SPAC3C7.01c ||SPAC732.03c|inositol polyphosphate phosphatase |Sc... 45 1e-05
SPBC19F5.03 |||inositol polyphosphate phosphatase |Schizosacchar... 37 0.003
SPBC2G2.02 |syj1||inositol-polyphosphate 5-phosphatase |Schizosa... 34 0.017
SPBC577.13 |syj2||inositol-polyphosphate 5-phosphatase |Schizosa... 31 0.16
SPBC12C2.07c |||spermidine synthase |Schizosaccharomyces pombe|c... 27 2.0
SPBC21C3.14c |||sequence orphan|Schizosaccharomyces pombe|chr 2|... 27 2.6
SPBP4H10.16c |||phosphatase activator |Schizosaccharomyces pombe... 27 3.5
SPCC1682.15 |mug122||PX/PXA domain protein|Schizosaccharomyces p... 26 4.6
SPAC3H1.12c |snt2||Lid2 complex subunit Snt2 |Schizosaccharomyce... 25 8.1
SPAC3A11.08 |pcu4|cul4, Cul-4|cullin 4|Schizosaccharomyces pombe... 25 8.1
>SPAC1093.03 |||inositol polyphosphate phosphatase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 832
Score = 102 bits (245), Expect = 4e-23
Identities = 51/106 (48%), Positives = 62/106 (58%)
Frame = +2
Query: 224 FSSFVQMRGSIPSYWSQDISKMVPKPAISIDLGDPFAEIPGKHLNNLMRRYGSPIMFLNL 403
++S+VQ RGSIP WSQ+ S + PKP I ID DPF H + L YG P + LNL
Sbjct: 282 YTSYVQHRGSIPLRWSQEFSNITPKPPIGIDFHDPFYASTALHFDRLFGHYGIPCIVLNL 341
Query: 404 VKKREKKKHESLLTDVISNGIKYLNQFLPPEHAIQYYHLYMARVNK 541
VK EK K ESLL D + I+YLNQFL IQY M+ +K
Sbjct: 342 VKSSEKVKRESLLLDEFESAIQYLNQFLKDSQKIQYIAWDMSAASK 387
>SPAC3C7.01c ||SPAC732.03c|inositol polyphosphate phosphatase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 611
Score = 44.8 bits (101), Expect = 1e-05
Identities = 20/65 (30%), Positives = 39/65 (60%)
Frame = +2
Query: 230 SFVQMRGSIPSYWSQDISKMVPKPAISIDLGDPFAEIPGKHLNNLMRRYGSPIMFLNLVK 409
SF Q+RGSIP +W+ +++ + +P +S+ D + GKH L YG ++ +NL+
Sbjct: 254 SFTQIRGSIPMFWA-EVNDLHYRPLLSLQPLDYSETVFGKHFQELANDYGDNLVVVNLLD 312
Query: 410 KREKK 424
++ ++
Sbjct: 313 QKGRE 317
>SPBC19F5.03 |||inositol polyphosphate phosphatase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 598
Score = 36.7 bits (81), Expect = 0.003
Identities = 24/83 (28%), Positives = 43/83 (51%)
Frame = +2
Query: 230 SFVQMRGSIPSYWSQDISKMVPKPAISIDLGDPFAEIPGKHLNNLMRRYGSPIMFLNLVK 409
S VQ RGS+P++W+ +++ + KP + + A KH + + YG ++ +NLV
Sbjct: 241 SHVQTRGSVPAFWA-EVNNLRYKPLMVANSASMAAAAAKKHFDEQISIYGDQVV-VNLV- 297
Query: 410 KREKKKHESLLTDVISNGIKYLN 478
K HE + + N I+ L+
Sbjct: 298 --NCKGHELPIKQLYENVIRRLD 318
>SPBC2G2.02 |syj1||inositol-polyphosphate 5-phosphatase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1076
Score = 34.3 bits (75), Expect = 0.017
Identities = 21/60 (35%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
Frame = +2
Query: 230 SFVQMRGSIPSYWSQD-ISKMVPKPAISIDLGDPFAEIPGKHLNNLMRRYGSPIMFLNLV 406
S+ Q+RGSIP +W Q+ + K I+ L A KH +L+ YG P+ +NL+
Sbjct: 282 SYCQVRGSIPIFWEQEGVQMFGQKIDITRSLEATRAAFE-KHFTSLIEEYG-PVHIINLL 339
>SPBC577.13 |syj2||inositol-polyphosphate 5-phosphatase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 889
Score = 31.1 bits (67), Expect = 0.16
Identities = 18/63 (28%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Frame = +2
Query: 230 SFVQMRGSIPSYWSQDISKMVPKPAIS-IDLGDPFAEIPGKHLNNLMRRYGSPIMFLNLV 406
SFVQ+RG++P +W + S P+IS + + H + L + YG I ++L+
Sbjct: 293 SFVQVRGTVPCFWEEQFSSWY-GPSISFLRSSQASQSLFNFHFSKLYKAYGD-IYVIDLL 350
Query: 407 KKR 415
+ +
Sbjct: 351 QTK 353
>SPBC12C2.07c |||spermidine synthase |Schizosaccharomyces pombe|chr
2|||Manual
Length = 298
Score = 27.5 bits (58), Expect = 2.0
Identities = 16/46 (34%), Positives = 22/46 (47%)
Frame = +2
Query: 251 SIPSYWSQDISKMVPKPAISIDLGDPFAEIPGKHLNNLMRRYGSPI 388
+IP+Y S I +V SIDL P + + N L + Y S I
Sbjct: 232 TIPTYPSGSIGFVVASKDASIDLSKPLRKWSPEEENKLCKYYNSEI 277
>SPBC21C3.14c |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 841
Score = 27.1 bits (57), Expect = 2.6
Identities = 13/41 (31%), Positives = 22/41 (53%)
Frame = +2
Query: 431 ESLLTDVISNGIKYLNQFLPPEHAIQYYHLYMARVNKGSEA 553
++ +T +I I++L FL Q H+Y + V + SEA
Sbjct: 210 KATITQMIETSIRFLRTFLDMHIKPQLQHIYESVVEEKSEA 250
>SPBP4H10.16c |||phosphatase activator |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 295
Score = 26.6 bits (56), Expect = 3.5
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = -3
Query: 345 PGISANGSPRSIDIAGLGTIFEMSCDQ*LGI 253
P + G P I + T+FE+S DQ LG+
Sbjct: 17 PDFNYEGDPIIIQLCDRDTVFELSRDQLLGL 47
>SPCC1682.15 |mug122||PX/PXA domain protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 749
Score = 26.2 bits (55), Expect = 4.6
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = -2
Query: 508 LYCMLRG*ELIQIFDAVTNHIGQ*RFV 428
L+C+LR +Q+F +T H RFV
Sbjct: 223 LHCLLREVLAMQVFKRITTHCSSPRFV 249
>SPAC3H1.12c |snt2||Lid2 complex subunit Snt2 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1131
Score = 25.4 bits (53), Expect = 8.1
Identities = 13/32 (40%), Positives = 16/32 (50%)
Frame = +2
Query: 527 ARVNKGSEAKVLDK*VTFSFXVQKSMCNIYRH 622
A +N+ S KV K F F VQ + C Y H
Sbjct: 254 ALLNEPSNCKVCKKWCAFDFSVQCADCKKYYH 285
>SPAC3A11.08 |pcu4|cul4, Cul-4|cullin 4|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 734
Score = 25.4 bits (53), Expect = 8.1
Identities = 10/31 (32%), Positives = 20/31 (64%)
Frame = +2
Query: 368 RRYGSPIMFLNLVKKREKKKHESLLTDVISN 460
R++ + ++K++EK KH+ L+ VI+N
Sbjct: 667 RQFELQASIVRVMKQKEKMKHDDLVQYVINN 697
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,824,537
Number of Sequences: 5004
Number of extensions: 56972
Number of successful extensions: 140
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 135
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 139
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 331187010
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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