Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV32589
(710 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z83220-2|CAB05701.2| 905|Caenorhabditis elegans Hypothetical pr... 108 3e-24
Z82077-5|CAB63333.1| 783|Caenorhabditis elegans Hypothetical pr... 40 0.002
Z81072-5|CAB03020.1| 591|Caenorhabditis elegans Hypothetical pr... 34 0.12
Z82274-16|CAC70096.1| 1119|Caenorhabditis elegans Hypothetical p... 33 0.15
Z82274-15|CAB05234.2| 1113|Caenorhabditis elegans Hypothetical p... 33 0.15
AL132951-13|CAC70127.1| 1119|Caenorhabditis elegans Hypothetical... 33 0.15
AL132951-12|CAC44311.1| 1113|Caenorhabditis elegans Hypothetical... 33 0.15
AL132951-11|CAN86614.1| 502|Caenorhabditis elegans Hypothetical... 33 0.15
AF283324-1|AAG18576.1| 502|Caenorhabditis elegans synaptojanin ... 33 0.15
AF283323-1|AAG18575.1| 1113|Caenorhabditis elegans synaptojanin ... 33 0.15
AF283322-1|AAG18574.1| 1119|Caenorhabditis elegans synaptojanin ... 33 0.15
AC024859-2|AAK29971.2| 502|Caenorhabditis elegans Set (trithora... 29 3.3
>Z83220-2|CAB05701.2| 905|Caenorhabditis elegans Hypothetical
protein C34B7.2 protein.
Length = 905
Score = 108 bits (260), Expect = 3e-24
Identities = 52/113 (46%), Positives = 72/113 (63%), Gaps = 2/113 (1%)
Frame = +2
Query: 221 RFSSFVQMRGSIPSYWSQDISK--MVPKPAISIDLGDPFAEIPGKHLNNLMRRYGSPIMF 394
RFSSFVQMRGS+P WSQD S +V KP I ID +P A+ H ++ +YG+PI+
Sbjct: 286 RFSSFVQMRGSVPMRWSQDPSTRGVVGKPLILIDNHEPHAQTAASHFRDVRNKYGNPIVI 345
Query: 395 LNLVKKREKKKHESLLTDVISNGIKYLNQFLPPEHAIQYYHLYMARVNKGSEA 553
+NL+K+ EK++HE +L I+YLNQFLP E + Y +AR NK + +
Sbjct: 346 MNLIKRNEKRRHEGVLHTQFLKNIEYLNQFLPNEEKLCYISFDVARCNKAANS 398
>Z82077-5|CAB63333.1| 783|Caenorhabditis elegans Hypothetical
protein W09C5.7 protein.
Length = 783
Score = 39.9 bits (89), Expect = 0.002
Identities = 22/65 (33%), Positives = 36/65 (55%)
Frame = +2
Query: 230 SFVQMRGSIPSYWSQDISKMVPKPAISIDLGDPFAEIPGKHLNNLMRRYGSPIMFLNLVK 409
SFVQ RGSIP +WSQ K P I+ + + + +H L Y +P++ ++LV
Sbjct: 272 SFVQCRGSIPVFWSQRGFKYRPPLIINRSVEETHG-VFTEHFKRLKAHYDTPLVAVSLVD 330
Query: 410 KREKK 424
+R ++
Sbjct: 331 QRGRE 335
>Z81072-5|CAB03020.1| 591|Caenorhabditis elegans Hypothetical
protein F30A10.6 protein.
Length = 591
Score = 33.9 bits (74), Expect = 0.12
Identities = 25/69 (36%), Positives = 36/69 (52%), Gaps = 3/69 (4%)
Frame = +2
Query: 227 SSFVQMRGSIPSYWSQDIS-KMVPKPAISIDLGDPFAEIPGKHLNNLMRRYGSPIMFLNL 403
+SFVQ+RGSIP W+Q + + P P + D A + + + YG + +NL
Sbjct: 260 TSFVQLRGSIPLLWTQKPNLRWQPMPTLK-PTDDQLAAF-NRAFSWHKQHYGGKHVIVNL 317
Query: 404 V--KKREKK 424
V K REKK
Sbjct: 318 VNQKGREKK 326
>Z82274-16|CAC70096.1| 1119|Caenorhabditis elegans Hypothetical
protein JC8.10b protein.
Length = 1119
Score = 33.5 bits (73), Expect = 0.15
Identities = 29/100 (29%), Positives = 44/100 (44%), Gaps = 1/100 (1%)
Frame = +2
Query: 230 SFVQMRGSIPSYWSQDISKMVPKPAISIDLGDPFAEIPGKHLNNLMRRYGSPIMFLNLVK 409
S +Q+RGSIP +W Q V + + + +HL+ L RYG +NL+
Sbjct: 242 SLLQIRGSIPLFWEQP-GVNVGSHKVKLRAFETSLPAYHRHLSQLQHRYGE-FAIVNLLG 299
Query: 410 KREKKKHESLLTDVISNGIKYLNQFLPPEHAIQY-YHLYM 526
++E E +L D K + F P I + YH M
Sbjct: 300 RKE---GERVLGDAFKTQHK-SSHFAPLVDFIDFDYHAQM 335
>Z82274-15|CAB05234.2| 1113|Caenorhabditis elegans Hypothetical
protein JC8.10a protein.
Length = 1113
Score = 33.5 bits (73), Expect = 0.15
Identities = 29/100 (29%), Positives = 44/100 (44%), Gaps = 1/100 (1%)
Frame = +2
Query: 230 SFVQMRGSIPSYWSQDISKMVPKPAISIDLGDPFAEIPGKHLNNLMRRYGSPIMFLNLVK 409
S +Q+RGSIP +W Q V + + + +HL+ L RYG +NL+
Sbjct: 242 SLLQIRGSIPLFWEQP-GVNVGSHKVKLRAFETSLPAYHRHLSQLQHRYGE-FAIVNLLG 299
Query: 410 KREKKKHESLLTDVISNGIKYLNQFLPPEHAIQY-YHLYM 526
++E E +L D K + F P I + YH M
Sbjct: 300 RKE---GERVLGDAFKTQHK-SSHFAPLVDFIDFDYHAQM 335
>AL132951-13|CAC70127.1| 1119|Caenorhabditis elegans Hypothetical
protein JC8.10b protein.
Length = 1119
Score = 33.5 bits (73), Expect = 0.15
Identities = 29/100 (29%), Positives = 44/100 (44%), Gaps = 1/100 (1%)
Frame = +2
Query: 230 SFVQMRGSIPSYWSQDISKMVPKPAISIDLGDPFAEIPGKHLNNLMRRYGSPIMFLNLVK 409
S +Q+RGSIP +W Q V + + + +HL+ L RYG +NL+
Sbjct: 242 SLLQIRGSIPLFWEQP-GVNVGSHKVKLRAFETSLPAYHRHLSQLQHRYGE-FAIVNLLG 299
Query: 410 KREKKKHESLLTDVISNGIKYLNQFLPPEHAIQY-YHLYM 526
++E E +L D K + F P I + YH M
Sbjct: 300 RKE---GERVLGDAFKTQHK-SSHFAPLVDFIDFDYHAQM 335
>AL132951-12|CAC44311.1| 1113|Caenorhabditis elegans Hypothetical
protein JC8.10a protein.
Length = 1113
Score = 33.5 bits (73), Expect = 0.15
Identities = 29/100 (29%), Positives = 44/100 (44%), Gaps = 1/100 (1%)
Frame = +2
Query: 230 SFVQMRGSIPSYWSQDISKMVPKPAISIDLGDPFAEIPGKHLNNLMRRYGSPIMFLNLVK 409
S +Q+RGSIP +W Q V + + + +HL+ L RYG +NL+
Sbjct: 242 SLLQIRGSIPLFWEQP-GVNVGSHKVKLRAFETSLPAYHRHLSQLQHRYGE-FAIVNLLG 299
Query: 410 KREKKKHESLLTDVISNGIKYLNQFLPPEHAIQY-YHLYM 526
++E E +L D K + F P I + YH M
Sbjct: 300 RKE---GERVLGDAFKTQHK-SSHFAPLVDFIDFDYHAQM 335
>AL132951-11|CAN86614.1| 502|Caenorhabditis elegans Hypothetical
protein JC8.10c protein.
Length = 502
Score = 33.5 bits (73), Expect = 0.15
Identities = 29/100 (29%), Positives = 44/100 (44%), Gaps = 1/100 (1%)
Frame = +2
Query: 230 SFVQMRGSIPSYWSQDISKMVPKPAISIDLGDPFAEIPGKHLNNLMRRYGSPIMFLNLVK 409
S +Q+RGSIP +W Q V + + + +HL+ L RYG +NL+
Sbjct: 242 SLLQIRGSIPLFWEQP-GVNVGSHKVKLRAFETSLPAYHRHLSQLQHRYGE-FAIVNLLG 299
Query: 410 KREKKKHESLLTDVISNGIKYLNQFLPPEHAIQY-YHLYM 526
++E E +L D K + F P I + YH M
Sbjct: 300 RKE---GERVLGDAFKTQHK-SSHFAPLVDFIDFDYHAQM 335
>AF283324-1|AAG18576.1| 502|Caenorhabditis elegans synaptojanin
UNC-26C protein.
Length = 502
Score = 33.5 bits (73), Expect = 0.15
Identities = 29/100 (29%), Positives = 44/100 (44%), Gaps = 1/100 (1%)
Frame = +2
Query: 230 SFVQMRGSIPSYWSQDISKMVPKPAISIDLGDPFAEIPGKHLNNLMRRYGSPIMFLNLVK 409
S +Q+RGSIP +W Q V + + + +HL+ L RYG +NL+
Sbjct: 242 SLLQIRGSIPLFWEQP-GVNVGSHKVKLRAFETSLPAYHRHLSQLQHRYGE-FAIVNLLG 299
Query: 410 KREKKKHESLLTDVISNGIKYLNQFLPPEHAIQY-YHLYM 526
++E E +L D K + F P I + YH M
Sbjct: 300 RKE---GERVLGDAFKTQHK-SSHFAPLVDFIDFDYHAQM 335
>AF283323-1|AAG18575.1| 1113|Caenorhabditis elegans synaptojanin
UNC-26B protein.
Length = 1113
Score = 33.5 bits (73), Expect = 0.15
Identities = 29/100 (29%), Positives = 44/100 (44%), Gaps = 1/100 (1%)
Frame = +2
Query: 230 SFVQMRGSIPSYWSQDISKMVPKPAISIDLGDPFAEIPGKHLNNLMRRYGSPIMFLNLVK 409
S +Q+RGSIP +W Q V + + + +HL+ L RYG +NL+
Sbjct: 242 SLLQIRGSIPLFWEQP-GVNVGSHKVKLRAFETSLPAYHRHLSQLQHRYGE-FAIVNLLG 299
Query: 410 KREKKKHESLLTDVISNGIKYLNQFLPPEHAIQY-YHLYM 526
++E E +L D K + F P I + YH M
Sbjct: 300 RKE---GERVLGDAFKTQHK-SSHFAPLVDFIDFDYHAQM 335
>AF283322-1|AAG18574.1| 1119|Caenorhabditis elegans synaptojanin
UNC-26A protein.
Length = 1119
Score = 33.5 bits (73), Expect = 0.15
Identities = 29/100 (29%), Positives = 44/100 (44%), Gaps = 1/100 (1%)
Frame = +2
Query: 230 SFVQMRGSIPSYWSQDISKMVPKPAISIDLGDPFAEIPGKHLNNLMRRYGSPIMFLNLVK 409
S +Q+RGSIP +W Q V + + + +HL+ L RYG +NL+
Sbjct: 242 SLLQIRGSIPLFWEQP-GVNVGSHKVKLRAFETSLPAYHRHLSQLQHRYGE-FAIVNLLG 299
Query: 410 KREKKKHESLLTDVISNGIKYLNQFLPPEHAIQY-YHLYM 526
++E E +L D K + F P I + YH M
Sbjct: 300 RKE---GERVLGDAFKTQHK-SSHFAPLVDFIDFDYHAQM 335
>AC024859-2|AAK29971.2| 502|Caenorhabditis elegans Set
(trithorax/polycomb) domaincontaining protein 27
protein.
Length = 502
Score = 29.1 bits (62), Expect = 3.3
Identities = 13/40 (32%), Positives = 24/40 (60%)
Frame = +2
Query: 377 GSPIMFLNLVKKREKKKHESLLTDVISNGIKYLNQFLPPE 496
G+P++ L+ + HE++LTDV++ I+ L + P E
Sbjct: 284 GNPVIIPALIPVLDMANHENVLTDVLTEPIEDLVCYSPEE 323
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,362,241
Number of Sequences: 27780
Number of extensions: 313516
Number of successful extensions: 814
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 800
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 813
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1655655746
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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