Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV32586
(454 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U65579-1|AAB51776.1| 210|Homo sapiens mitochondrial NADH dehydr... 145 5e-35
BC119754-1|AAI19755.1| 210|Homo sapiens NADH dehydrogenase (ubi... 145 5e-35
AF038406-1|AAC34273.1| 210|Homo sapiens NADH dehydrogenase-ubiq... 145 5e-35
AK223114-1|BAD96834.1| 210|Homo sapiens NADH dehydrogenase (ubi... 144 9e-35
BC046247-1|AAH46247.1| 802|Homo sapiens carbohydrate (chondroit... 30 3.2
AY358529-1|AAQ88893.1| 802|Homo sapiens CHSY1 protein. 30 3.2
AB071402-1|BAB64936.1| 802|Homo sapiens chondroitin synthase pr... 30 3.2
AB023207-1|BAA76834.2| 883|Homo sapiens KIAA0990 protein protein. 30 3.2
BC012726-1|AAH12726.2| 777|Homo sapiens DDX31 protein protein. 29 9.8
AY028899-1|AAK30024.1| 1624|Homo sapiens ATP-binding cassette A9... 29 9.8
AK074491-1|BAC11021.1| 483|Homo sapiens protein ( Homo sapiens ... 29 9.8
AK057068-1|BAB71359.1| 856|Homo sapiens protein ( Homo sapiens ... 29 9.8
AK027002-1|BAB15620.1| 674|Homo sapiens protein ( Homo sapiens ... 29 9.8
AF423346-1|AAN32752.1| 1624|Homo sapiens ATP-binding cassette su... 29 9.8
AF423307-1|AAN32751.1| 1624|Homo sapiens ATP-binding cassette su... 29 9.8
AF335569-1|AAQ14890.1| 758|Homo sapiens helicain C protein. 29 9.8
AF335568-1|AAQ14889.1| 851|Homo sapiens helicain B protein. 29 9.8
>U65579-1|AAB51776.1| 210|Homo sapiens mitochondrial NADH
dehydrogenase-ubiquinone Fe-S protein 8, 23 kDa subunit
prec protein.
Length = 210
Score = 145 bits (352), Expect = 5e-35
Identities = 61/85 (71%), Positives = 74/85 (87%)
Frame = +2
Query: 200 YKYVNAEEQDMSFRAMSDRAAHTMFWTELXRGFAVTLAHIFKEPATINYPFEKXPLSPRF 379
YKYVN ++ +M ++++DRAA T+ WTEL RG +TL+++F+EPATINYPFEK PLSPRF
Sbjct: 36 YKYVNMQDPEMDMKSVTDRAARTLLWTELFRGLGMTLSYLFREPATINYPFEKGPLSPRF 95
Query: 380 TGEHALRRYPSGEERCIACKLCEAI 454
GEHALRRYPSGEERCIACKLCEAI
Sbjct: 96 RGEHALRRYPSGEERCIACKLCEAI 120
>BC119754-1|AAI19755.1| 210|Homo sapiens NADH dehydrogenase
(ubiquinone) Fe-S protein 8, 23kDa (NADH-coenzyme Q
reductas protein.
Length = 210
Score = 145 bits (352), Expect = 5e-35
Identities = 61/85 (71%), Positives = 74/85 (87%)
Frame = +2
Query: 200 YKYVNAEEQDMSFRAMSDRAAHTMFWTELXRGFAVTLAHIFKEPATINYPFEKXPLSPRF 379
YKYVN ++ +M ++++DRAA T+ WTEL RG +TL+++F+EPATINYPFEK PLSPRF
Sbjct: 36 YKYVNMQDPEMDMKSVTDRAARTLLWTELFRGLGMTLSYLFREPATINYPFEKGPLSPRF 95
Query: 380 TGEHALRRYPSGEERCIACKLCEAI 454
GEHALRRYPSGEERCIACKLCEAI
Sbjct: 96 RGEHALRRYPSGEERCIACKLCEAI 120
>AF038406-1|AAC34273.1| 210|Homo sapiens NADH
dehydrogenase-ubiquinone Fe-S protein 8 23 kDa subunit
protein.
Length = 210
Score = 145 bits (352), Expect = 5e-35
Identities = 61/85 (71%), Positives = 74/85 (87%)
Frame = +2
Query: 200 YKYVNAEEQDMSFRAMSDRAAHTMFWTELXRGFAVTLAHIFKEPATINYPFEKXPLSPRF 379
YKYVN ++ +M ++++DRAA T+ WTEL RG +TL+++F+EPATINYPFEK PLSPRF
Sbjct: 36 YKYVNMQDPEMDMKSVTDRAARTLLWTELFRGLGMTLSYLFREPATINYPFEKGPLSPRF 95
Query: 380 TGEHALRRYPSGEERCIACKLCEAI 454
GEHALRRYPSGEERCIACKLCEAI
Sbjct: 96 RGEHALRRYPSGEERCIACKLCEAI 120
>AK223114-1|BAD96834.1| 210|Homo sapiens NADH dehydrogenase
(ubiquinone) Fe-S protein 8, 23kDa (NADH-coenzyme Q
reductas protein.
Length = 210
Score = 144 bits (350), Expect = 9e-35
Identities = 61/85 (71%), Positives = 73/85 (85%)
Frame = +2
Query: 200 YKYVNAEEQDMSFRAMSDRAAHTMFWTELXRGFAVTLAHIFKEPATINYPFEKXPLSPRF 379
YKYVN ++ +M +++DRAA T+ WTEL RG +TL+++F+EPATINYPFEK PLSPRF
Sbjct: 36 YKYVNMQDPEMDMESVTDRAARTLLWTELFRGLGMTLSYLFREPATINYPFEKGPLSPRF 95
Query: 380 TGEHALRRYPSGEERCIACKLCEAI 454
GEHALRRYPSGEERCIACKLCEAI
Sbjct: 96 RGEHALRRYPSGEERCIACKLCEAI 120
>BC046247-1|AAH46247.1| 802|Homo sapiens carbohydrate (chondroitin)
synthase 1 protein.
Length = 802
Score = 30.3 bits (65), Expect = 3.2
Identities = 16/58 (27%), Positives = 29/58 (50%)
Frame = +2
Query: 56 ENVFSKAYFQSHHEYEHQGVSGVIVKRAQYSSSSEGNVEKVYPQNIPGYKYVNAEEQD 229
+ FSK F H E + Q ++ I + + S +++K+ P +PG K + E +D
Sbjct: 474 QQTFSKIQFVEHEELDAQELAKRINQESGSLSFLSNSLKKLVPFQLPGSKSEHKEPKD 531
>AY358529-1|AAQ88893.1| 802|Homo sapiens CHSY1 protein.
Length = 802
Score = 30.3 bits (65), Expect = 3.2
Identities = 16/58 (27%), Positives = 29/58 (50%)
Frame = +2
Query: 56 ENVFSKAYFQSHHEYEHQGVSGVIVKRAQYSSSSEGNVEKVYPQNIPGYKYVNAEEQD 229
+ FSK F H E + Q ++ I + + S +++K+ P +PG K + E +D
Sbjct: 474 QQTFSKIQFVEHEELDAQELAKRINQESGSLSFLSNSLKKLVPFQLPGSKSEHKEPKD 531
>AB071402-1|BAB64936.1| 802|Homo sapiens chondroitin synthase
protein.
Length = 802
Score = 30.3 bits (65), Expect = 3.2
Identities = 16/58 (27%), Positives = 29/58 (50%)
Frame = +2
Query: 56 ENVFSKAYFQSHHEYEHQGVSGVIVKRAQYSSSSEGNVEKVYPQNIPGYKYVNAEEQD 229
+ FSK F H E + Q ++ I + + S +++K+ P +PG K + E +D
Sbjct: 474 QQTFSKIQFVEHEELDAQELAKRINQESGSLSFLSNSLKKLVPFQLPGSKSEHKEPKD 531
>AB023207-1|BAA76834.2| 883|Homo sapiens KIAA0990 protein protein.
Length = 883
Score = 30.3 bits (65), Expect = 3.2
Identities = 16/58 (27%), Positives = 29/58 (50%)
Frame = +2
Query: 56 ENVFSKAYFQSHHEYEHQGVSGVIVKRAQYSSSSEGNVEKVYPQNIPGYKYVNAEEQD 229
+ FSK F H E + Q ++ I + + S +++K+ P +PG K + E +D
Sbjct: 555 QQTFSKIQFVEHEELDAQELAKRINQESGSLSFLSNSLKKLVPFQLPGSKSEHKEPKD 612
>BC012726-1|AAH12726.2| 777|Homo sapiens DDX31 protein protein.
Length = 777
Score = 28.7 bits (61), Expect = 9.8
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = +2
Query: 128 VKRAQYSSSSEGNVEKVYPQNIPG 199
+ R++YSS E +V KV QN PG
Sbjct: 712 ILRSEYSSGMEADVAKVKKQNAPG 735
>AY028899-1|AAK30024.1| 1624|Homo sapiens ATP-binding cassette A9
protein.
Length = 1624
Score = 28.7 bits (61), Expect = 9.8
Identities = 20/61 (32%), Positives = 28/61 (45%)
Frame = +2
Query: 272 FWTELXRGFAVTLAHIFKEPATINYPFEKXPLSPRFTGEHALRRYPSGEERCIACKLCEA 451
FW + R V L + T N FE P+SP F G+ A+R +E C+ EA
Sbjct: 442 FWFQHGRANHVVLENETDSDPTPNDCFE--PVSPEFCGKEAIRIKNLKKEYAGKCERVEA 499
Query: 452 I 454
+
Sbjct: 500 L 500
>AK074491-1|BAC11021.1| 483|Homo sapiens protein ( Homo sapiens
cDNA FLJ90010 fis, clone HEMBA1000349, weakly similar to
ATP-BINDING CASSETTE TRANSPORTER 1. ).
Length = 483
Score = 28.7 bits (61), Expect = 9.8
Identities = 20/61 (32%), Positives = 28/61 (45%)
Frame = +2
Query: 272 FWTELXRGFAVTLAHIFKEPATINYPFEKXPLSPRFTGEHALRRYPSGEERCIACKLCEA 451
FW + R V L + T N FE P+SP F G+ A+R +E C+ EA
Sbjct: 69 FWFQHGRANHVVLENETDSDPTPNDCFE--PVSPEFCGKEAIRIKNLKKEYAGKCERVEA 126
Query: 452 I 454
+
Sbjct: 127 L 127
>AK057068-1|BAB71359.1| 856|Homo sapiens protein ( Homo sapiens
cDNA FLJ32506 fis, clone SMINT1000042, weakly similar to
ATP-BINDING CASSETTE, SUB-FAMILY A, MEMBER 3. ).
Length = 856
Score = 28.7 bits (61), Expect = 9.8
Identities = 20/61 (32%), Positives = 28/61 (45%)
Frame = +2
Query: 272 FWTELXRGFAVTLAHIFKEPATINYPFEKXPLSPRFTGEHALRRYPSGEERCIACKLCEA 451
FW + R V L + T N FE P+SP F G+ A+R +E C+ EA
Sbjct: 442 FWFQHGRANHVVLENETDSDPTPNDCFE--PVSPEFCGKEAIRIKNLKKEYAGKCERVEA 499
Query: 452 I 454
+
Sbjct: 500 L 500
>AK027002-1|BAB15620.1| 674|Homo sapiens protein ( Homo sapiens
cDNA: FLJ23349 fis, clone HEP13913. ).
Length = 674
Score = 28.7 bits (61), Expect = 9.8
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = +2
Query: 128 VKRAQYSSSSEGNVEKVYPQNIPG 199
+ R++YSS E +V KV QN PG
Sbjct: 609 ILRSEYSSGMEADVAKVKKQNAPG 632
>AF423346-1|AAN32752.1| 1624|Homo sapiens ATP-binding cassette
sub-family A member 9 protein.
Length = 1624
Score = 28.7 bits (61), Expect = 9.8
Identities = 20/61 (32%), Positives = 28/61 (45%)
Frame = +2
Query: 272 FWTELXRGFAVTLAHIFKEPATINYPFEKXPLSPRFTGEHALRRYPSGEERCIACKLCEA 451
FW + R V L + T N FE P+SP F G+ A+R +E C+ EA
Sbjct: 442 FWFQHGRANHVVLENETDSDPTPNDCFE--PVSPEFCGKEAIRIKNLKKEYAGKCERVEA 499
Query: 452 I 454
+
Sbjct: 500 L 500
>AF423307-1|AAN32751.1| 1624|Homo sapiens ATP-binding cassette
sub-family A member 9 protein.
Length = 1624
Score = 28.7 bits (61), Expect = 9.8
Identities = 20/61 (32%), Positives = 28/61 (45%)
Frame = +2
Query: 272 FWTELXRGFAVTLAHIFKEPATINYPFEKXPLSPRFTGEHALRRYPSGEERCIACKLCEA 451
FW + R V L + T N FE P+SP F G+ A+R +E C+ EA
Sbjct: 442 FWFQHGRANHVVLENETDSDPTPNDCFE--PVSPEFCGKEAIRIKNLKKEYAGKCERVEA 499
Query: 452 I 454
+
Sbjct: 500 L 500
>AF335569-1|AAQ14890.1| 758|Homo sapiens helicain C protein.
Length = 758
Score = 28.7 bits (61), Expect = 9.8
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = +2
Query: 128 VKRAQYSSSSEGNVEKVYPQNIPG 199
+ R++YSS E +V KV QN PG
Sbjct: 713 ILRSEYSSGMEADVAKVKKQNAPG 736
>AF335568-1|AAQ14889.1| 851|Homo sapiens helicain B protein.
Length = 851
Score = 28.7 bits (61), Expect = 9.8
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = +2
Query: 128 VKRAQYSSSSEGNVEKVYPQNIPG 199
+ R++YSS E +V KV QN PG
Sbjct: 786 ILRSEYSSGMEADVAKVKKQNAPG 809
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 63,404,631
Number of Sequences: 237096
Number of extensions: 1281322
Number of successful extensions: 3013
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 2950
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3013
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 3758237868
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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