Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV32583
         (766 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

08_01_0475 - 4185534-4186047,4187437-4187708,4188032-4188979,419...    28   9.4  
04_02_0031 + 8874025-8874180,8882152-8882550,8882651-8882987,888...    28   9.4  

>08_01_0475 -
           4185534-4186047,4187437-4187708,4188032-4188979,
           4190096-4190387,4190486-4191357,4192298-4192354,
           4192391-4192504,4192966-4193595
          Length = 1232

 Score = 27.9 bits (59), Expect = 9.4
 Identities = 12/37 (32%), Positives = 23/37 (62%)
 Frame = -3

Query: 347 IINLYQMSAYISIFILFYDILLSFGDKRFNALKQRNC 237
           +INLY + A I I+I+F+ + +S   + F+ +  + C
Sbjct: 316 VINLYFLGATIPIWIMFFALGVSSDKEAFDIIDIQEC 352


>04_02_0031 +
           8874025-8874180,8882152-8882550,8882651-8882987,
           8883234-8884060
          Length = 572

 Score = 27.9 bits (59), Expect = 9.4
 Identities = 11/27 (40%), Positives = 19/27 (70%)
 Frame = -2

Query: 498 KCNKYIRLSLLILPTNAEMLQRPFKAI 418
           +CN Y+ +S L+L T +  LQR ++A+
Sbjct: 121 QCNDYLDISCLMLATMSPELQRQYEAL 147


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,204,540
Number of Sequences: 37544
Number of extensions: 262571
Number of successful extensions: 429
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 427
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 429
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2051430072
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)