Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV32583
         (766 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ435332-1|ABD92647.1|  135|Apis mellifera OBP15 protein.              22   5.4  
EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          21   9.5  
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      21   9.5  
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    21   9.5  

>DQ435332-1|ABD92647.1|  135|Apis mellifera OBP15 protein.
          Length = 135

 Score = 22.2 bits (45), Expect = 5.4
 Identities = 7/25 (28%), Positives = 14/25 (56%)
 Frame = +3

Query: 195 TNCTNLNSNVISLRTVPLFKCIKPF 269
           T C+ ++   + L+   +F+CI  F
Sbjct: 102 TECSAISDTNVHLKITKIFQCITKF 126


>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 21.4 bits (43), Expect = 9.5
 Identities = 14/40 (35%), Positives = 19/40 (47%)
 Frame = -1

Query: 304 FYSMTFYFRLETKGLMHLNKGTVLREITLLFKLVQFVYDF 185
           F S+  +  L    L  L    +LRE++ LFKL     DF
Sbjct: 82  FLSIYKHGMLPRGELFSLYYPQLLREMSALFKLFYHAKDF 121


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 21.4 bits (43), Expect = 9.5
 Identities = 14/40 (35%), Positives = 19/40 (47%)
 Frame = -1

Query: 304 FYSMTFYFRLETKGLMHLNKGTVLREITLLFKLVQFVYDF 185
           F S+  +  L    L  L    +LRE++ LFKL     DF
Sbjct: 82  FLSIYKHGMLPRGELFSLYYPQLLREMSALFKLFYHAKDF 121


>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
           protein.
          Length = 1370

 Score = 21.4 bits (43), Expect = 9.5
 Identities = 9/30 (30%), Positives = 18/30 (60%)
 Frame = +1

Query: 241 FLCLSALNLLSPNESRMS*NKIKIEMYADI 330
           F+  + +NL+ PN      N  +++MYA++
Sbjct: 623 FINNNYINLVRPNTFTDKVNLTRVDMYANM 652


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 178,996
Number of Sequences: 438
Number of extensions: 3621
Number of successful extensions: 6
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 23911269
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)