Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV32578
         (639 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ257631-1|ABB82366.1|  424|Apis mellifera yellow e3-like protei...    22   5.8  
AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly pro...    21   7.6  
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    21   7.6  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    21   7.6  

>DQ257631-1|ABB82366.1|  424|Apis mellifera yellow e3-like protein
           protein.
          Length = 424

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 10/27 (37%), Positives = 13/27 (48%)
 Frame = -2

Query: 635 IKHWVFLGALLNYLLITEFIEAIHYSF 555
           ++ WV    + NY L  E  EA   SF
Sbjct: 272 VESWVNTSVIRNYTLFNENSEAAARSF 298


>AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly
           protein 8 protein.
          Length = 416

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 6/25 (24%), Positives = 15/25 (60%)
 Frame = +2

Query: 491 KTYILLLLFNANELQIKLVSKKKNN 565
           KT+++++ FN     + +++ K  N
Sbjct: 73  KTFVIIMKFNGVPSSLNVITNKTGN 97


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
            AbsCAM-Ig7B protein.
          Length = 1923

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = +1

Query: 427  GIIKKYSLNTELID 468
            GII KY+L T ++D
Sbjct: 1242 GIITKYNLYTRVVD 1255


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
            AbsCAM-Ig7A protein.
          Length = 1919

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = +1

Query: 427  GIIKKYSLNTELID 468
            GII KY+L T ++D
Sbjct: 1238 GIITKYNLYTRVVD 1251


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 173,539
Number of Sequences: 438
Number of extensions: 3803
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19193721
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)