Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV32566
         (686 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cycl...    23   2.1  
X52884-1|CAA37066.1|  461|Apis mellifera elongation factor 1 alp...    22   4.8  
EF013227-1|ABK54581.1|  119|Apis mellifera elongation factor 1-a...    22   4.8  

>AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cyclase
           beta-3 protein.
          Length = 832

 Score = 23.4 bits (48), Expect = 2.1
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = -1

Query: 455 TFTESILIITPVQAVRYFNELY 390
           TFTE    ITP++ V   N +Y
Sbjct: 432 TFTEICSRITPMEVVSMLNAMY 453


>X52884-1|CAA37066.1|  461|Apis mellifera elongation factor 1 alpha
           protein.
          Length = 461

 Score = 22.2 bits (45), Expect = 4.8
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = -2

Query: 250 LGCHNGYVRFKFVELK 203
           L CH  ++  KF E+K
Sbjct: 361 LDCHTAHIACKFAEIK 376


>EF013227-1|ABK54581.1|  119|Apis mellifera elongation factor
           1-alpha protein.
          Length = 119

 Score = 22.2 bits (45), Expect = 4.8
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = -2

Query: 250 LGCHNGYVRFKFVELK 203
           L CH  ++  KF E+K
Sbjct: 72  LDCHTAHIACKFAEIK 87


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 169,296
Number of Sequences: 438
Number of extensions: 3217
Number of successful extensions: 4
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20952180
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)