BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV32559
(586 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY089665-1|AAL90403.1| 383|Drosophila melanogaster RH33377p pro... 73 3e-13
AE014296-2151|AAF49910.1| 383|Drosophila melanogaster CG10646-P... 73 3e-13
AE013599-1691|AAF58386.1| 392|Drosophila melanogaster CG17047-P... 31 1.5
AY094944-1|AAM11297.1| 518|Drosophila melanogaster RH57551p pro... 29 4.6
AE014296-980|AAO41276.2| 518|Drosophila melanogaster CG17795-PB... 29 4.6
AE014296-979|AAF50761.3| 518|Drosophila melanogaster CG17795-PA... 29 4.6
>AY089665-1|AAL90403.1| 383|Drosophila melanogaster RH33377p
protein.
Length = 383
Score = 72.9 bits (171), Expect = 3e-13
Identities = 33/60 (55%), Positives = 46/60 (76%)
Frame = +3
Query: 357 DGNSIIYGLEHQTRSLSPQYAESEAIRFLIGTQSLKPNSNQVHVVELEEDTGALHTKVFQ 536
D NS+IYGLE Q R+L+PQY ES + F I T SLKP +NQVH+++ EE+ G++ +KVF+
Sbjct: 2 DENSLIYGLELQARALTPQYGESNDVCFFIATNSLKP-TNQVHLIQYEEEQGSVQSKVFE 60
>AE014296-2151|AAF49910.1| 383|Drosophila melanogaster CG10646-PA
protein.
Length = 383
Score = 72.9 bits (171), Expect = 3e-13
Identities = 33/60 (55%), Positives = 46/60 (76%)
Frame = +3
Query: 357 DGNSIIYGLEHQTRSLSPQYAESEAIRFLIGTQSLKPNSNQVHVVELEEDTGALHTKVFQ 536
D NS+IYGLE Q R+L+PQY ES + F I T SLKP +NQVH+++ EE+ G++ +KVF+
Sbjct: 2 DENSLIYGLELQARALTPQYGESNDVCFFIATNSLKP-TNQVHLIQYEEEQGSVQSKVFE 60
>AE013599-1691|AAF58386.1| 392|Drosophila melanogaster CG17047-PA
protein.
Length = 392
Score = 30.7 bits (66), Expect = 1.5
Identities = 16/31 (51%), Positives = 18/31 (58%), Gaps = 2/31 (6%)
Frame = -1
Query: 442 KNLIASLSAYCGDND--LV*CSSPYMMEFPS 356
KN+ + YCG ND LV S PYMM F S
Sbjct: 338 KNMAYQPTYYCGTNDNLLVYASPPYMMHFSS 368
>AY094944-1|AAM11297.1| 518|Drosophila melanogaster RH57551p
protein.
Length = 518
Score = 29.1 bits (62), Expect = 4.6
Identities = 14/45 (31%), Positives = 26/45 (57%)
Frame = +3
Query: 51 LCIL*VIFVFLCLRLLNTVPTVCFLTKSCFKKVSXCSFYPYLYLM 185
+C++ I V+LC++ L + CF+ C+ C F+ YL+L+
Sbjct: 229 ICLVLTIAVYLCVKKLMNLEGKCFI---CY---MMCLFFGYLFLL 267
>AE014296-980|AAO41276.2| 518|Drosophila melanogaster CG17795-PB,
isoform B protein.
Length = 518
Score = 29.1 bits (62), Expect = 4.6
Identities = 14/45 (31%), Positives = 26/45 (57%)
Frame = +3
Query: 51 LCIL*VIFVFLCLRLLNTVPTVCFLTKSCFKKVSXCSFYPYLYLM 185
+C++ I V+LC++ L + CF+ C+ C F+ YL+L+
Sbjct: 229 ICLVLTIAVYLCVKKLMNLEGKCFI---CY---MMCLFFGYLFLL 267
>AE014296-979|AAF50761.3| 518|Drosophila melanogaster CG17795-PA,
isoform A protein.
Length = 518
Score = 29.1 bits (62), Expect = 4.6
Identities = 14/45 (31%), Positives = 26/45 (57%)
Frame = +3
Query: 51 LCIL*VIFVFLCLRLLNTVPTVCFLTKSCFKKVSXCSFYPYLYLM 185
+C++ I V+LC++ L + CF+ C+ C F+ YL+L+
Sbjct: 229 ICLVLTIAVYLCVKKLMNLEGKCFI---CY---MMCLFFGYLFLL 267
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,973,281
Number of Sequences: 53049
Number of extensions: 499884
Number of successful extensions: 1031
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 982
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1029
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2338128087
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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