Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV32559
         (586 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL110500-12|CAB60432.1|  362|Caenorhabditis elegans Hypothetical...    41   7e-04
AC024791-14|AAF60658.1|  767|Caenorhabditis elegans P300/cbp ass...    29   2.4  
AY130758-3|AAN61519.1| 10578|Caenorhabditis elegans 1MDa_1 prote...    27   9.8  
AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 prote...    27   9.8  
AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 prote...    27   9.8  

>AL110500-12|CAB60432.1|  362|Caenorhabditis elegans Hypothetical
           protein Y87G2A.11 protein.
          Length = 362

 Score = 40.7 bits (91), Expect = 7e-04
 Identities = 16/56 (28%), Positives = 36/56 (64%)
 Frame = +3

Query: 369 IIYGLEHQTRSLSPQYAESEAIRFLIGTQSLKPNSNQVHVVELEEDTGALHTKVFQ 536
           +++G++ + R ++   A+ E I FL+GT ++K + NQV+ + ++ +   L +K F+
Sbjct: 5   LMFGMDCEARCMTSMTADEENICFLVGTNNIKNDKNQVNKLFMDPEASRLMSKTFR 60


>AC024791-14|AAF60658.1|  767|Caenorhabditis elegans P300/cbp
           associated factor homologprotein 1 protein.
          Length = 767

 Score = 29.1 bits (62), Expect = 2.4
 Identities = 20/59 (33%), Positives = 29/59 (49%)
 Frame = +3

Query: 354 EDGNSIIYGLEHQTRSLSPQYAESEAIRFLIGTQSLKPNSNQVHVVELEEDTGALHTKV 530
           E    +  GLEH  R  SPQ  E   +R + GT SLK +    +   L+E   +L +K+
Sbjct: 602 ESRGKVFGGLEHLFRESSPQLLE---LRKVPGTDSLKMHKKSCY--HLDERDDSLDSKI 655


>AY130758-3|AAN61519.1| 10578|Caenorhabditis elegans 1MDa_1 protein
            protein.
          Length = 10578

 Score = 27.1 bits (57), Expect = 9.8
 Identities = 17/69 (24%), Positives = 34/69 (49%)
 Frame = +3

Query: 312  NNILENTSKTLITMEDGNSIIYGLEHQTRSLSPQYAESEAIRFLIGTQSLKPNSNQVHVV 491
            N++LE+T  T I    G+      + +  +   +   + + R    T +L+   NQ+H +
Sbjct: 2141 NSLLEDTEVTEIMKRKGSD----KDKRKATRIKRVPSAHSARITPITSNLRDRLNQLHQL 2196

Query: 492  ELEEDTGAL 518
             + ED+G+L
Sbjct: 2197 TVSEDSGSL 2205


>AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 protein
            protein.
          Length = 18519

 Score = 27.1 bits (57), Expect = 9.8
 Identities = 17/69 (24%), Positives = 34/69 (49%)
 Frame = +3

Query: 312  NNILENTSKTLITMEDGNSIIYGLEHQTRSLSPQYAESEAIRFLIGTQSLKPNSNQVHVV 491
            N++LE+T  T I    G+      + +  +   +   + + R    T +L+   NQ+H +
Sbjct: 2141 NSLLEDTEVTEIMKRKGSD----KDKRKATRIKRVPSAHSARITPITSNLRDRLNQLHQL 2196

Query: 492  ELEEDTGAL 518
             + ED+G+L
Sbjct: 2197 TVSEDSGSL 2205


>AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 protein
            protein.
          Length = 18534

 Score = 27.1 bits (57), Expect = 9.8
 Identities = 17/69 (24%), Positives = 34/69 (49%)
 Frame = +3

Query: 312  NNILENTSKTLITMEDGNSIIYGLEHQTRSLSPQYAESEAIRFLIGTQSLKPNSNQVHVV 491
            N++LE+T  T I    G+      + +  +   +   + + R    T +L+   NQ+H +
Sbjct: 2141 NSLLEDTEVTEIMKRKGSD----KDKRKATRIKRVPSAHSARITPITSNLRDRLNQLHQL 2196

Query: 492  ELEEDTGAL 518
             + ED+G+L
Sbjct: 2197 TVSEDSGSL 2205


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,346,474
Number of Sequences: 27780
Number of extensions: 277582
Number of successful extensions: 772
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 755
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 772
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1226509528
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)