BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV32556
(668 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC045834-1|AAH45834.2| 435|Homo sapiens C14orf145 protein protein. 30 8.6
AC010072-1|AAF09033.1| 187|Homo sapiens unknown protein. 30 8.6
>BC045834-1|AAH45834.2| 435|Homo sapiens C14orf145 protein protein.
Length = 435
Score = 29.9 bits (64), Expect = 8.6
Identities = 17/41 (41%), Positives = 23/41 (56%)
Frame = +2
Query: 533 IRHLNDEFVQNRDSLERMYRLLKNSGCRDIDNKRLGSAVID 655
I HL + Q+ D L R RLL+NSG R I L ++ +D
Sbjct: 76 IEHLKESLEQSIDQL-RSQRLLRNSGGRSISVTSLSASDLD 115
>AC010072-1|AAF09033.1| 187|Homo sapiens unknown protein.
Length = 187
Score = 29.9 bits (64), Expect = 8.6
Identities = 17/41 (41%), Positives = 23/41 (56%)
Frame = +2
Query: 533 IRHLNDEFVQNRDSLERMYRLLKNSGCRDIDNKRLGSAVID 655
I HL + Q+ D L R RLL+NSG R I L ++ +D
Sbjct: 16 IEHLKESLEQSIDQL-RSQRLLRNSGGRSISVTSLSASDLD 55
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 90,643,115
Number of Sequences: 237096
Number of extensions: 1838469
Number of successful extensions: 5341
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 5086
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5338
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7591280850
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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