Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV32556
(668 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U27312-6|AAA68250.1| 512|Caenorhabditis elegans Hypothetical pr... 31 0.98
AF098997-2|AAC68722.2| 796|Caenorhabditis elegans Hypothetical ... 30 1.7
Z79596-4|CAB01856.2| 554|Caenorhabditis elegans Hypothetical pr... 29 3.0
AC006683-1|AAK71395.4| 954|Caenorhabditis elegans Adenylyl cycl... 29 3.0
AL031633-20|CAC42372.2| 497|Caenorhabditis elegans Hypothetical... 29 3.9
Z72510-6|CAM84693.1| 2892|Caenorhabditis elegans Hypothetical pr... 28 6.9
Z72510-5|CAM84692.1| 3095|Caenorhabditis elegans Hypothetical pr... 28 6.9
Z72507-18|CAM84805.1| 2892|Caenorhabditis elegans Hypothetical p... 28 6.9
Z72507-17|CAM84804.1| 3095|Caenorhabditis elegans Hypothetical p... 28 6.9
>U27312-6|AAA68250.1| 512|Caenorhabditis elegans Hypothetical
protein F26A1.3 protein.
Length = 512
Score = 30.7 bits (66), Expect = 0.98
Identities = 18/42 (42%), Positives = 24/42 (57%)
Frame = -3
Query: 411 KPWWIFIRLSVSPKATASQARSPRSQGALPSNEEDARDISTA 286
KP WI R PKA+A ARS + +G++P + E A S A
Sbjct: 462 KPDWITKR--TPPKASAEMARS-KEKGSIPKSNESASQTSDA 500
>AF098997-2|AAC68722.2| 796|Caenorhabditis elegans Hypothetical
protein T10D4.6 protein.
Length = 796
Score = 29.9 bits (64), Expect = 1.7
Identities = 23/87 (26%), Positives = 36/87 (41%), Gaps = 1/87 (1%)
Frame = -3
Query: 360 SQARSPRSQGALPSNEEDARDISTAAPACCRHSSACVDSSTDATPAVS-VCSALYSLRQA 184
S + P P E AR PA +S S+D +P+ S +CS++++
Sbjct: 485 STSAIPMDTAPAPPASESARSSPAMEPATEEETSG----SSDPSPSTSDLCSSMHACDSP 540
Query: 183 AALRASDRYSRMLETSAPSEPPQRERC 103
A + +R S S+ S PP C
Sbjct: 541 ATPESENRVSEERSESSRSLPPTVAVC 567
>Z79596-4|CAB01856.2| 554|Caenorhabditis elegans Hypothetical
protein C02C6.2b protein.
Length = 554
Score = 29.1 bits (62), Expect = 3.0
Identities = 12/46 (26%), Positives = 22/46 (47%)
Frame = -3
Query: 390 RLSVSPKATASQARSPRSQGALPSNEEDARDISTAAPACCRHSSAC 253
R S + + S+ + +S P + + R +S A P CC++ C
Sbjct: 3 RCSAPREISVSEETTEKSGRKSPKSPIECRKLSKAPPLCCKNGEEC 48
>AC006683-1|AAK71395.4| 954|Caenorhabditis elegans Adenylyl cyclase
protein 4 protein.
Length = 954
Score = 29.1 bits (62), Expect = 3.0
Identities = 11/41 (26%), Positives = 22/41 (53%)
Frame = +2
Query: 491 RNHNERLYWLHNVLIRHLNDEFVQNRDSLERMYRLLKNSGC 613
R H + L N+L H+ FV++ S+ ++Y +++ C
Sbjct: 717 RKHEQNRSVLENILPSHVAKHFVEDATSVSKLYHESRDNAC 757
>AL031633-20|CAC42372.2| 497|Caenorhabditis elegans Hypothetical
protein Y39A1A.23 protein.
Length = 497
Score = 28.7 bits (61), Expect = 3.9
Identities = 17/72 (23%), Positives = 30/72 (41%)
Frame = -3
Query: 321 SNEEDARDISTAAPACCRHSSACVDSSTDATPAVSVCSALYSLRQAAALRASDRYSRMLE 142
+ E+ D STA + R S +D+S+ T CS S + ++ +R +
Sbjct: 293 AQHEEEEDKSTAHSSSSRRKSKAIDTSSSGTQKSKKCSESLSQEETTRSQSLPSRNRFVP 352
Query: 141 TSAPSEPPQRER 106
+E R+R
Sbjct: 353 EIPVAEQSWRDR 364
>Z72510-6|CAM84693.1| 2892|Caenorhabditis elegans Hypothetical
protein F53B7.5b protein.
Length = 2892
Score = 27.9 bits (59), Expect = 6.9
Identities = 23/80 (28%), Positives = 36/80 (45%)
Frame = -3
Query: 366 TASQARSPRSQGALPSNEEDARDISTAAPACCRHSSACVDSSTDATPAVSVCSALYSLRQ 187
++S + S SQ + PS+ + S+++PA S SSTDA + S+ S
Sbjct: 443 SSSPSESTESQSSTPSDASSSESASSSSPAATTEESG---SSTDAVSSSPSGSSSESPNS 499
Query: 186 AAALRASDRYSRMLETSAPS 127
+ SD S T+ PS
Sbjct: 500 STG--GSDSSSSESVTTEPS 517
>Z72510-5|CAM84692.1| 3095|Caenorhabditis elegans Hypothetical
protein F53B7.5a protein.
Length = 3095
Score = 27.9 bits (59), Expect = 6.9
Identities = 23/80 (28%), Positives = 36/80 (45%)
Frame = -3
Query: 366 TASQARSPRSQGALPSNEEDARDISTAAPACCRHSSACVDSSTDATPAVSVCSALYSLRQ 187
++S + S SQ + PS+ + S+++PA S SSTDA + S+ S
Sbjct: 443 SSSPSESTESQSSTPSDASSSESASSSSPAATTEESG---SSTDAVSSSPSGSSSESPNS 499
Query: 186 AAALRASDRYSRMLETSAPS 127
+ SD S T+ PS
Sbjct: 500 STG--GSDSSSSESVTTEPS 517
>Z72507-18|CAM84805.1| 2892|Caenorhabditis elegans Hypothetical
protein F53B7.5b protein.
Length = 2892
Score = 27.9 bits (59), Expect = 6.9
Identities = 23/80 (28%), Positives = 36/80 (45%)
Frame = -3
Query: 366 TASQARSPRSQGALPSNEEDARDISTAAPACCRHSSACVDSSTDATPAVSVCSALYSLRQ 187
++S + S SQ + PS+ + S+++PA S SSTDA + S+ S
Sbjct: 443 SSSPSESTESQSSTPSDASSSESASSSSPAATTEESG---SSTDAVSSSPSGSSSESPNS 499
Query: 186 AAALRASDRYSRMLETSAPS 127
+ SD S T+ PS
Sbjct: 500 STG--GSDSSSSESVTTEPS 517
>Z72507-17|CAM84804.1| 3095|Caenorhabditis elegans Hypothetical
protein F53B7.5a protein.
Length = 3095
Score = 27.9 bits (59), Expect = 6.9
Identities = 23/80 (28%), Positives = 36/80 (45%)
Frame = -3
Query: 366 TASQARSPRSQGALPSNEEDARDISTAAPACCRHSSACVDSSTDATPAVSVCSALYSLRQ 187
++S + S SQ + PS+ + S+++PA S SSTDA + S+ S
Sbjct: 443 SSSPSESTESQSSTPSDASSSESASSSSPAATTEESG---SSTDAVSSSPSGSSSESPNS 499
Query: 186 AAALRASDRYSRMLETSAPS 127
+ SD S T+ PS
Sbjct: 500 STG--GSDSSSSESVTTEPS 517
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,087,165
Number of Sequences: 27780
Number of extensions: 278074
Number of successful extensions: 991
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 953
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 991
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1508017654
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -