Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV32543
(504 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_04_0087 + 22718930-22719068,22719165-22719484,22721406-22722500 39 0.003
01_01_0216 + 1843413-1843509,1844583-1844694,1844841-1844908,184... 36 0.018
11_06_0528 - 24681630-24681751,24681911-24682025,24682134-246821... 33 0.099
11_06_0495 - 24319531-24320831,24320923-24321109,24322919-243230... 31 0.53
03_02_0024 + 5079690-5081351 31 0.53
01_06_0224 - 27672201-27672336,27672439-27672507,27672948-276730... 31 0.53
05_06_0267 - 26784861-26784896,26785324-26785404,26785530-267857... 30 0.92
08_01_0005 + 47929-48201,48663-48788,49009-49054,49188-49270,496... 30 1.2
10_07_0111 - 12982291-12982704,12982788-12983267,12983371-129836... 29 1.6
06_03_0635 - 22971502-22973840,22974112-22974403,22974639-229751... 29 1.6
04_04_1600 + 34704527-34704758,34705393-34706777 29 1.6
01_06_0798 + 32070026-32070356,32070446-32070720,32070825-320713... 29 1.6
01_06_0565 + 30287253-30287502,30287522-30289010,30289133-302892... 29 1.6
12_02_0450 + 19172812-19172920,19173020-19173088,19173168-191732... 29 2.1
07_03_1046 - 23531218-23532638,23532781-23532868 29 2.1
04_04_1164 - 31413577-31414080,31414435-31414647 29 2.1
04_04_0078 + 22573413-22573554,22573637-22573959,22574681-225753... 29 2.1
03_01_0047 + 391689-392738,392832-392999,393091-393195,393529-39... 29 2.1
01_06_1106 + 34563368-34563679 29 2.1
12_02_0518 - 19937507-19938481,19938805-19939151,19939246-19939387 29 2.8
12_02_0509 - 19829360-19830400,19831475-19831821,19831920-19832073 29 2.8
12_01_0874 + 8384332-8384657,8385447-8386044 29 2.8
02_02_0424 + 10074206-10074287,10074389-10074485,10074584-100746... 29 2.8
07_03_1402 + 26302443-26302575,26302851-26302980,26303128-26303893 28 3.7
04_04_1601 + 34707975-34708209,34708598-34709970 28 3.7
03_02_0023 + 5065962-5066079,5066179-5067614 28 3.7
03_01_0414 + 3183292-3183735,3184547-3184969,3185435-3185535,318... 28 3.7
11_01_0319 - 2396835-2396951,2397035-2397105,2397219-2397297,239... 28 4.9
03_02_0568 + 9514715-9514944,9515174-9515300,9515529-9515684,951... 28 4.9
11_06_0492 - 24304313-24305263,24305375-24305721,24305793-24305931 27 6.5
07_03_0902 - 22435692-22436156,22436684-22436923,22437228-224373... 27 6.5
04_03_1002 - 21617339-21617362,21618476-21618565,21618755-216194... 27 6.5
02_04_0656 - 24769069-24770814,24771552-24771608,24773307-247735... 27 6.5
02_04_0169 + 20554715-20555083,20555150-20555632,20557926-205580... 27 6.5
02_01_0595 + 4420112-4420401,4420518-4420607,4421883-4421931,442... 27 8.6
01_06_1837 - 40232102-40232381,40232675-40233702 27 8.6
01_01_0495 - 3657194-3657589 27 8.6
>04_04_0087 + 22718930-22719068,22719165-22719484,22721406-22722500
Length = 517
Score = 38.7 bits (86), Expect = 0.003
Identities = 26/81 (32%), Positives = 43/81 (53%)
Frame = +3
Query: 261 GAIPVLNFAGEIFTLAAGGARPPLSPNQQAMALGAVQVAGSVLASSIVERAGRKPLLLTT 440
G I + F+ +F A G+ L A+ LGAV + ++++ + V+R GR+ L LT
Sbjct: 300 GVIVIAFFSPVLFQTAGFGSNASL---MGAVILGAVNLGSTLVSIATVDRYGRRVLFLTG 356
Query: 441 ALVSGAXMCALATWFLCRRLG 503
LV A A+A W + ++G
Sbjct: 357 GLVMIACQVAVA-WIMGSQIG 376
>01_01_0216 +
1843413-1843509,1844583-1844694,1844841-1844908,
1845165-1845297,1845404-1845503,1845562-1845722,
1846095-1846188,1846273-1846426,1846597-1846743,
1846819-1846892,1846985-1847073,1847161-1847275,
1847569-1847751
Length = 508
Score = 35.9 bits (79), Expect = 0.018
Identities = 18/48 (37%), Positives = 30/48 (62%)
Frame = +3
Query: 357 LGAVQVAGSVLASSIVERAGRKPLLLTTALVSGAXMCALATWFLCRRL 500
+GA V G+++ASS++++ GRK LL+T+ A M L+ F + L
Sbjct: 349 VGAANVFGTMIASSLMDKQGRKSLLITSFSGMAASMLLLSLSFTWKAL 396
>11_06_0528 -
24681630-24681751,24681911-24682025,24682134-24682193,
24682454-24682513,24682606-24682668,24682752-24682798,
24682884-24683049,24683136-24683228,24683306-24683370,
24683462-24683537,24683644-24683709,24684114-24684203,
24684359-24684421,24684548-24684670
Length = 402
Score = 33.5 bits (73), Expect = 0.099
Identities = 22/70 (31%), Positives = 42/70 (60%), Gaps = 2/70 (2%)
Frame = +3
Query: 273 VLNFAGEIFTLAAGGARPPLSPNQQAMALGAVQVAGSVLASSIVERAGRKPLLL--TTAL 446
+L +A E F ++AG A L + +G +Q + + + +++R+GR+PLLL T+ L
Sbjct: 236 ILFYASETF-VSAGFASGDLG----TILMGCIQAPITAVGALLMDRSGRRPLLLISTSGL 290
Query: 447 VSGAXMCALA 476
+ G+ M A++
Sbjct: 291 LIGSLMSAVS 300
>11_06_0495 -
24319531-24320831,24320923-24321109,24322919-24323062,
24324467-24324469
Length = 544
Score = 31.1 bits (67), Expect = 0.53
Identities = 14/42 (33%), Positives = 26/42 (61%)
Frame = +3
Query: 351 MALGAVQVAGSVLASSIVERAGRKPLLLTTALVSGAXMCALA 476
+A+G V+ ++A+ + +R GR+PLLL +A + +LA
Sbjct: 383 VAVGVVKTCSILVATLLSDRVGRRPLLLWSAAGMAVALASLA 424
>03_02_0024 + 5079690-5081351
Length = 553
Score = 31.1 bits (67), Expect = 0.53
Identities = 13/32 (40%), Positives = 25/32 (78%)
Frame = +3
Query: 348 AMALGAVQVAGSVLASSIVERAGRKPLLLTTA 443
++A+GA + ++A+ +++R GR+PLLLT+A
Sbjct: 361 SVAVGASKTLFILVATFLLDRVGRRPLLLTSA 392
>01_06_0224 -
27672201-27672336,27672439-27672507,27672948-27673040,
27673245-27673336,27673491-27673577,27673734-27673832,
27673927-27674026,27674113-27674171,27674361-27674720
Length = 364
Score = 31.1 bits (67), Expect = 0.53
Identities = 23/57 (40%), Positives = 27/57 (47%), Gaps = 4/57 (7%)
Frame = -3
Query: 418 LPALSTMLEASTEPATCTAPS---AMACWLGESGGRAPPAASV-KISPAKLSTGMAP 260
LPAL+ AS P +A S A A + GR P + K P K STGMAP
Sbjct: 3 LPALAAGRAASVRPPRASAASGEAAAAAAADQPAGRRPVKVILPKKKPQKWSTGMAP 59
>05_06_0267 -
26784861-26784896,26785324-26785404,26785530-26785702,
26785780-26785938,26786199-26786328,26786447-26786609,
26787027-26787109,26787605-26787664,26787819-26787940,
26789126-26789275,26789354-26789546,26790156-26790393,
26791240-26791320,26791403-26791647
Length = 637
Score = 30.3 bits (65), Expect = 0.92
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = -2
Query: 395 GGEHGAGDLHGAQRHGLLVGGERGPRSARRQRE 297
GG G+GD + HG+ +GG RG A +E
Sbjct: 21 GGSRGSGDAGTNKEHGVPMGGRRGSGGAGADQE 53
>08_01_0005 +
47929-48201,48663-48788,49009-49054,49188-49270,
49651-49728,49831-49884,50004-50138,50222-51691
Length = 754
Score = 29.9 bits (64), Expect = 1.2
Identities = 20/63 (31%), Positives = 26/63 (41%)
Frame = -3
Query: 448 TSAVVSSSGFLPALSTMLEASTEPATCTAPSAMACWLGESGGRAPPAASVKISPAKLSTG 269
+SAV S L L + S++P S A WL S APP S + P+ L
Sbjct: 278 SSAVSSGGADLADLRQVQNNSSQPGFLQYQSHDAHWLSTSQANAPPIPSSEPPPSALPNN 337
Query: 268 MAP 260
P
Sbjct: 338 SFP 340
>10_07_0111 -
12982291-12982704,12982788-12983267,12983371-12983645,
12983735-12984065
Length = 499
Score = 29.5 bits (63), Expect = 1.6
Identities = 13/36 (36%), Positives = 22/36 (61%)
Frame = -2
Query: 386 HGAGDLHGAQRHGLLVGGERGPRSARRQREDLAREV 279
+GA L QR LL G +R P++ RR+ E+ ++ +
Sbjct: 192 NGANQLDPRQRDFLLAGNKRNPQAYRREVEEWSQNI 227
>06_03_0635 -
22971502-22973840,22974112-22974403,22974639-22975162,
22975314-22975583,22976393-22977124,22977226-22977310
Length = 1413
Score = 29.5 bits (63), Expect = 1.6
Identities = 16/35 (45%), Positives = 21/35 (60%)
Frame = -2
Query: 398 AGGEHGAGDLHGAQRHGLLVGGERGPRSARRQRED 294
AGG+ GA R G VGG++G R RR+R+D
Sbjct: 70 AGGQQGAEPAVRRVRGG--VGGQQGARPQRRRRQD 102
>04_04_1600 + 34704527-34704758,34705393-34706777
Length = 538
Score = 29.5 bits (63), Expect = 1.6
Identities = 15/42 (35%), Positives = 24/42 (57%)
Frame = +3
Query: 351 MALGAVQVAGSVLASSIVERAGRKPLLLTTALVSGAXMCALA 476
+A+G + A LA +++R GRKPLL + + A + LA
Sbjct: 351 VAVGFFKTAFIALAIVLIDRVGRKPLLYVSTVGMTACLVVLA 392
>01_06_0798 +
32070026-32070356,32070446-32070720,32070825-32071304,
32071387-32071800
Length = 499
Score = 29.5 bits (63), Expect = 1.6
Identities = 13/36 (36%), Positives = 22/36 (61%)
Frame = -2
Query: 386 HGAGDLHGAQRHGLLVGGERGPRSARRQREDLAREV 279
+GA L QR LL G +R P++ RR+ E+ ++ +
Sbjct: 192 NGANQLDPRQRDFLLAGNKRNPQAYRREVEERSQNI 227
>01_06_0565 +
30287253-30287502,30287522-30289010,30289133-30289277,
30289679-30289729
Length = 644
Score = 29.5 bits (63), Expect = 1.6
Identities = 20/65 (30%), Positives = 29/65 (44%)
Frame = -3
Query: 448 TSAVVSSSGFLPALSTMLEASTEPATCTAPSAMACWLGESGGRAPPAASVKISPAKLSTG 269
TS G+ P ST A P++ T+P+ GG PPA ++ P S+G
Sbjct: 422 TSPTTPGGGYSP--STPCNAPPSPSSDTSPTT------PGGGNYPPAPTIGNVPPSPSSG 473
Query: 268 MAPHT 254
+P T
Sbjct: 474 TSPST 478
Score = 28.3 bits (60), Expect = 3.7
Identities = 20/68 (29%), Positives = 26/68 (38%), Gaps = 2/68 (2%)
Frame = -3
Query: 451 DTSAVVSSSGFLPALSTMLEASTEPATCTAPSAM--ACWLGESGGRAPPAASVKISPAKL 278
DTS G P T+ P++ T+PS C + APP+ S SP
Sbjct: 446 DTSPTTPGGGNYPPAPTIGNVPPSPSSGTSPSTPGGGCSSSPTPCDAPPSPSSDTSPTTP 505
Query: 277 STGMAPHT 254
G P T
Sbjct: 506 GGGYYPPT 513
>12_02_0450 +
19172812-19172920,19173020-19173088,19173168-19173274,
19173874-19174365
Length = 258
Score = 29.1 bits (62), Expect = 2.1
Identities = 12/20 (60%), Positives = 12/20 (60%)
Frame = -2
Query: 419 PAGPLDDAGGEHGAGDLHGA 360
PAG DAGG G GD GA
Sbjct: 208 PAGSFGDAGGSTGGGDFSGA 227
>07_03_1046 - 23531218-23532638,23532781-23532868
Length = 502
Score = 29.1 bits (62), Expect = 2.1
Identities = 12/29 (41%), Positives = 22/29 (75%)
Frame = +3
Query: 354 ALGAVQVAGSVLASSIVERAGRKPLLLTT 440
A+G + ++A+ +++RAGR+PLLLT+
Sbjct: 316 AVGFAKTVFILVAAFLLDRAGRRPLLLTS 344
>04_04_1164 - 31413577-31414080,31414435-31414647
Length = 238
Score = 29.1 bits (62), Expect = 2.1
Identities = 17/51 (33%), Positives = 23/51 (45%)
Frame = -3
Query: 415 PALSTMLEASTEPATCTAPSAMACWLGESGGRAPPAASVKISPAKLSTGMA 263
P S AST A CT + + GR+ AA+ + SPA S+ A
Sbjct: 96 PPSSAAAAASTSAAVCTLDMVRSALERATAGRSAAAAAARGSPATSSSSSA 146
>04_04_0078 +
22573413-22573554,22573637-22573959,22574681-22575313,
22575383-22575838
Length = 517
Score = 29.1 bits (62), Expect = 2.1
Identities = 20/81 (24%), Positives = 38/81 (46%)
Frame = +3
Query: 261 GAIPVLNFAGEIFTLAAGGARPPLSPNQQAMALGAVQVAGSVLASSIVERAGRKPLLLTT 440
G I + F+ +F G+ L N + LGAV + +L++ +++R GRK L +
Sbjct: 302 GVIVISFFSPLVFRTVGFGSNAALMGN---VILGAVNLVCLMLSTLVIDRYGRKVLFMVG 358
Query: 441 ALVSGAXMCALATWFLCRRLG 503
+ +A W + ++G
Sbjct: 359 GAIMIIAQVGVA-WIMGAQVG 378
>03_01_0047 +
391689-392738,392832-392999,393091-393195,393529-393611,
393899-394364
Length = 623
Score = 29.1 bits (62), Expect = 2.1
Identities = 16/43 (37%), Positives = 17/43 (39%)
Frame = -2
Query: 416 AGPLDDAGGEHGAGDLHGAQRHGLLVGGERGPRSARRQREDLA 288
AGP D G+G G L GER R RR D A
Sbjct: 542 AGPTRDFASARGSGSAGRVAASGWLGAGERALRKRRRNAHDAA 584
>01_06_1106 + 34563368-34563679
Length = 103
Score = 29.1 bits (62), Expect = 2.1
Identities = 12/33 (36%), Positives = 21/33 (63%)
Frame = -3
Query: 409 LSTMLEASTEPATCTAPSAMACWLGESGGRAPP 311
++ M AS++PA+ P++ A LG + +APP
Sbjct: 1 MAPMSAASSQPASAATPTSTADRLGAASSQAPP 33
>12_02_0518 - 19937507-19938481,19938805-19939151,19939246-19939387
Length = 487
Score = 28.7 bits (61), Expect = 2.8
Identities = 13/45 (28%), Positives = 25/45 (55%)
Frame = +3
Query: 351 MALGAVQVAGSVLASSIVERAGRKPLLLTTALVSGAXMCALATWF 485
+ G + + ++A ++ +R GR+PLLL + A + AL + F
Sbjct: 323 VVFGVAKASSILVAMALTDRVGRRPLLLASTGGMTASLLALGSVF 367
>12_02_0509 - 19829360-19830400,19831475-19831821,19831920-19832073
Length = 513
Score = 28.7 bits (61), Expect = 2.8
Identities = 12/29 (41%), Positives = 20/29 (68%)
Frame = +3
Query: 357 LGAVQVAGSVLASSIVERAGRKPLLLTTA 443
LGA + A V+ + +R GR+P+LL++A
Sbjct: 341 LGATKTASIVVPLFLADRLGRRPMLLSSA 369
>12_01_0874 + 8384332-8384657,8385447-8386044
Length = 307
Score = 28.7 bits (61), Expect = 2.8
Identities = 26/83 (31%), Positives = 34/83 (40%), Gaps = 3/83 (3%)
Frame = -3
Query: 502 PNRRHRNHVASAHMXAPDTSAVVSSSGFLPALSTMLEAS-TEPATCTAPSA--MACWLGE 332
P+RR R+HVA A A + +P L T ++A ++ AT PS A E
Sbjct: 22 PDRRLRHHVADALASASHDATSRPKLDKIPILLTHIQAGRSDDATLIPPSCCYKAASAPE 81
Query: 331 SGGRAPPAASVKISPAKLSTGMA 263
PP A P ST A
Sbjct: 82 DSATKPPWAMPHRVPINDSTSHA 104
>02_02_0424 +
10074206-10074287,10074389-10074485,10074584-10074651,
10074727-10074859,10075102-10075137,10076109-10076208,
10076312-10076424,10076511-10076604,10077301-10077454,
10077563-10077706,10077802-10077875,10077949-10078037,
10078311-10078365,10078563-10078616
Length = 430
Score = 28.7 bits (61), Expect = 2.8
Identities = 11/32 (34%), Positives = 21/32 (65%)
Frame = +3
Query: 336 PNQQAMALGAVQVAGSVLASSIVERAGRKPLL 431
PN + +G ++GS++A ++++ GRK LL
Sbjct: 327 PNLANICMGIANLSGSIVAMLLMDKLGRKVLL 358
>07_03_1402 + 26302443-26302575,26302851-26302980,26303128-26303893
Length = 342
Score = 28.3 bits (60), Expect = 3.7
Identities = 21/63 (33%), Positives = 32/63 (50%), Gaps = 5/63 (7%)
Frame = -3
Query: 445 SAVVSSSGFLPALSTMLEASTEPAT--CTAPSAMACWLG---ESGGRAPPAASVKISPAK 281
+A V G L +LS +A+ E A +A + + C G SGG APPA + + P+
Sbjct: 175 AASVGGDGSLSSLSGYSQATAEFAVDGASASALLHCGGGGPTSSGGGAPPAPTAAVIPSV 234
Query: 280 LST 272
S+
Sbjct: 235 SSS 237
>04_04_1601 + 34707975-34708209,34708598-34709970
Length = 535
Score = 28.3 bits (60), Expect = 3.7
Identities = 15/42 (35%), Positives = 23/42 (54%)
Frame = +3
Query: 351 MALGAVQVAGSVLASSIVERAGRKPLLLTTALVSGAXMCALA 476
+ +G + V+A +V+R GRKPLL + A + ALA
Sbjct: 350 VGVGLSKTVFIVIAIVLVDRVGRKPLLYVSTAGITACLAALA 391
>03_02_0023 + 5065962-5066079,5066179-5067614
Length = 517
Score = 28.3 bits (60), Expect = 3.7
Identities = 15/47 (31%), Positives = 26/47 (55%)
Frame = +3
Query: 348 AMALGAVQVAGSVLASSIVERAGRKPLLLTTALVSGAXMCALATWFL 488
+MA+G + +A+ +++R GR+PLLL + + LAT L
Sbjct: 327 SMAVGVCKTFFIPIATLLLDRVGRRPLLLASGGGMAIFLFTLATSLL 373
>03_01_0414 +
3183292-3183735,3184547-3184969,3185435-3185535,
3186178-3187439,3187625-3187665,3187777-3187845,
3187975-3188075,3188413-3188491,3188570-3188668,
3188757-3188825,3188918-3188967,3189211-3189387,
3189496-3189634
Length = 1017
Score = 28.3 bits (60), Expect = 3.7
Identities = 17/45 (37%), Positives = 21/45 (46%), Gaps = 1/45 (2%)
Frame = -3
Query: 454 PDTSAVVSSSGFLPALSTMLEASTEPATCTAPS-AMACWLGESGG 323
P S S SG PALS +S+ P+ P+ A A G GG
Sbjct: 34 PSPSPASSPSGGPPALSVSTVSSSSPSAAATPTGAAAAGAGGGGG 78
>11_01_0319 -
2396835-2396951,2397035-2397105,2397219-2397297,
2397417-2397458,2397670-2397723,2397836-2397868,
2397959-2398039,2398144-2398230,2398313-2398388,
2398633-2398808,2398912-2399034,2399249-2399361,
2399521-2399632,2400054-2400273,2401986-2402314,
2402408-2402713,2403580-2403878,2404079-2404181,
2404266-2404369,2404840-2404906,2404911-2405076,
2405241-2405956
Length = 1157
Score = 27.9 bits (59), Expect = 4.9
Identities = 13/31 (41%), Positives = 16/31 (51%)
Frame = +3
Query: 360 GAVQVAGSVLASSIVERAGRKPLLLTTALVS 452
G + G L + + GRKPLLL TA S
Sbjct: 773 GIFRAVGYTLMGQLADEYGRKPLLLLTASTS 803
>03_02_0568 + 9514715-9514944,9515174-9515300,9515529-9515684,
9515765-9516102,9516191-9516329,9517083-9517152,
9517201-9517307,9517387-9517437,9517549-9517660,
9517783-9517869,9517958-9518133,9518479-9518586,
9518654-9518812,9518888-9518971,9519053-9519258,
9519565-9519666,9519768-9519877,9519963-9520114,
9520380-9520548,9520841-9520878,9521963-9522571,
9523314-9523784,9523786-9523871,9524396-9524906,
9525388-9525412,9526001-9526051,9526228-9526301,
9526412-9526534,9526667-9526738,9526924-9527020,
9527174-9527283
Length = 1649
Score = 27.9 bits (59), Expect = 4.9
Identities = 19/38 (50%), Positives = 22/38 (57%)
Frame = -3
Query: 490 HRNHVASAHMXAPDTSAVVSSSGFLPALSTMLEASTEP 377
H+N ASA A TSAVV SSG A S+ E S +P
Sbjct: 1036 HKNTAASA-AAACSTSAVVPSSGHEFACSSQEEDSFDP 1072
>11_06_0492 - 24304313-24305263,24305375-24305721,24305793-24305931
Length = 478
Score = 27.5 bits (58), Expect = 6.5
Identities = 13/42 (30%), Positives = 25/42 (59%)
Frame = +3
Query: 351 MALGAVQVAGSVLASSIVERAGRKPLLLTTALVSGAXMCALA 476
+A+G V+ ++A+ + +R GR+PLLL + + +LA
Sbjct: 318 IAIGVVKTCFILVATLLSDRLGRRPLLLASTGGMAVTLTSLA 359
>07_03_0902 -
22435692-22436156,22436684-22436923,22437228-22437349,
22437441-22437587,22437753-22437882,22437981-22438116,
22438223-22438428,22438644-22438844,22438999-22439157,
22439781-22439858,22440453-22440542,22440625-22440777,
22440873-22440991,22441190-22441328,22441422-22441525,
22441944-22441989,22442087-22442252,22442356-22442383,
22442460-22442610,22442686-22442829,22442912-22443013,
22443566-22444093
Length = 1217
Score = 27.5 bits (58), Expect = 6.5
Identities = 12/36 (33%), Positives = 17/36 (47%)
Frame = +3
Query: 75 VAWLRCXXEDDPHVLNXVDLIKNEQERDQESSKFVL 182
++ R DDPHV DL NE RD + ++
Sbjct: 282 ISQYRKKLNDDPHVYAIADLAFNEMRRDGVNQSIII 317
>04_03_1002 -
21617339-21617362,21618476-21618565,21618755-21619432,
21619536-21619772,21619849-21619896,21619995-21620045,
21620301-21620426,21620557-21620697,21621165-21621401,
21622467-21622571,21622812-21622982,21623306-21623380,
21623754-21623936,21624151-21624297,21624365-21624472,
21624605-21624709,21625109-21625213,21625322-21625381,
21625512-21625579,21625876-21625954,21626208-21626267,
21626445-21626498,21626834-21626886,21627405-21627494,
21628265-21628362,21628464-21628852
Length = 1193
Score = 27.5 bits (58), Expect = 6.5
Identities = 18/58 (31%), Positives = 27/58 (46%)
Frame = -3
Query: 454 PDTSAVVSSSGFLPALSTMLEASTEPATCTAPSAMACWLGESGGRAPPAASVKISPAK 281
P T + S+ G S ST P++ P+ + + GRAPP A+V + AK
Sbjct: 61 PTTPSSSSAGGRPTTPSAAFARSTTPSS-GRPTTPSSASSRAAGRAPPVAAVDAANAK 117
>02_04_0656 -
24769069-24770814,24771552-24771608,24773307-24773582,
24773675-24773965
Length = 789
Score = 27.5 bits (58), Expect = 6.5
Identities = 13/38 (34%), Positives = 15/38 (39%)
Frame = -2
Query: 131 IYXI*DVRIVLXXATQPRHHPHRXXQSGSEGRATHWRA 18
+Y R+VL A P H HR HWRA
Sbjct: 183 LYVFYSWRLVLAQAIAPPHAAHRGMPIDESSENPHWRA 220
>02_04_0169 +
20554715-20555083,20555150-20555632,20557926-20558003,
20558141-20558143
Length = 310
Score = 27.5 bits (58), Expect = 6.5
Identities = 15/44 (34%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
Frame = -3
Query: 457 APDTSAVVSSSGFLPAL-STMLEASTEPATCTAPSAMACWLGES 329
A DT+AV+ + +P + + A EPA AP + W G S
Sbjct: 184 ADDTAAVMPPAPAVPPPDAAAVTAGPEPAPAPAPGTLMVWSGPS 227
>02_01_0595 +
4420112-4420401,4420518-4420607,4421883-4421931,
4423337-4424020
Length = 370
Score = 27.1 bits (57), Expect = 8.6
Identities = 12/32 (37%), Positives = 16/32 (50%)
Frame = -2
Query: 395 GGEHGAGDLHGAQRHGLLVGGERGPRSARRQR 300
GG G G+ GA+ G++V E RR R
Sbjct: 20 GGGGGGGEKKGAKEEGVVVAAEAAAERGRRLR 51
>01_06_1837 - 40232102-40232381,40232675-40233702
Length = 435
Score = 27.1 bits (57), Expect = 8.6
Identities = 16/38 (42%), Positives = 21/38 (55%)
Frame = +3
Query: 285 AGEIFTLAAGGARPPLSPNQQAMALGAVQVAGSVLASS 398
A ++ T+A GA +P+QQ A GAV A L SS
Sbjct: 153 AAKLGTVALEGAAAARAPDQQQSAEGAVAEAFGALPSS 190
>01_01_0495 - 3657194-3657589
Length = 131
Score = 27.1 bits (57), Expect = 8.6
Identities = 19/43 (44%), Positives = 22/43 (51%), Gaps = 4/43 (9%)
Frame = -2
Query: 398 AGGEHGAGDLHGAQRHGLLV----GGERGPRSARRQREDLARE 282
+GGE AG G RHG GG+RG +RRQR D E
Sbjct: 10 SGGEVEAGR-GGEARHGRAAAIGRGGDRGRGRSRRQRLDADEE 51
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,958,080
Number of Sequences: 37544
Number of extensions: 169409
Number of successful extensions: 1185
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 1138
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1182
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1071221400
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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