Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV32543
         (504 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81099-3|CAB03186.3|  490|Caenorhabditis elegans Hypothetical pr...    33   0.089
AF016656-3|AAB66037.2|  515|Caenorhabditis elegans Hypothetical ...    32   0.21 
Z48582-8|CAB70201.1| 3178|Caenorhabditis elegans Hypothetical pr...    29   1.9  
Z48544-10|CAB70192.1| 3178|Caenorhabditis elegans Hypothetical p...    29   1.9  
Z66522-7|CAA91409.2|  472|Caenorhabditis elegans Hypothetical pr...    29   2.5  
Z66520-13|CAA91392.2|  472|Caenorhabditis elegans Hypothetical p...    29   2.5  
AF067607-9|AAF98609.1|  460|Caenorhabditis elegans Collagen prot...    29   2.5  
Z83113-3|CAB05545.1|  479|Caenorhabditis elegans Hypothetical pr...    28   3.3  
AC024772-3|AAF60538.1| 2344|Caenorhabditis elegans Hypothetical ...    28   3.3  
AL132898-6|CAC14409.1|  187|Caenorhabditis elegans Hypothetical ...    28   4.4  
AL132898-5|CAC14408.1|  316|Caenorhabditis elegans Hypothetical ...    28   4.4  
Z68317-3|CAA92687.1|  599|Caenorhabditis elegans Hypothetical pr...    27   5.8  
AF024502-2|AAK77623.1|  591|Caenorhabditis elegans Hypothetical ...    27   5.8  
AC024843-10|AAF60845.2|  526|Caenorhabditis elegans Hypothetical...    27   5.8  
Z50071-4|CAA90409.2| 1301|Caenorhabditis elegans Hypothetical pr...    27   7.7  
Z46381-4|CAA86519.2|  604|Caenorhabditis elegans Hypothetical pr...    27   7.7  
U41105-5|AAA82398.1|  390|Caenorhabditis elegans Hypothetical pr...    27   7.7  

>Z81099-3|CAB03186.3|  490|Caenorhabditis elegans Hypothetical
           protein K08F9.1 protein.
          Length = 490

 Score = 33.5 bits (73), Expect = 0.089
 Identities = 28/110 (25%), Positives = 45/110 (40%)
 Frame = +3

Query: 144 EQERDQESSKFVLKAVVTDKQMXXXXXXXXXXXXXXXXCGAIPVLNFAGEIFTLAAGGAR 323
           ++E+   + KF +  V+  K +                 G   +  FA EI         
Sbjct: 244 QKEQMNSTKKFTMLDVIQQKSLRDKAFVGAVVTFVMSFSGVAVISAFAFEILVNTGLNVL 303

Query: 324 PPLSPNQQAMALGAVQVAGSVLASSIVERAGRKPLLLTTALVSGAXMCAL 473
                N    A   V V  SVLA +I+++ GR+PLLL +  ++G  +C L
Sbjct: 304 QASLAND---ATTIVSVISSVLAIAIIDKNGRRPLLLIS--LAGILICNL 348


>AF016656-3|AAB66037.2|  515|Caenorhabditis elegans Hypothetical
           protein C35A11.4 protein.
          Length = 515

 Score = 32.3 bits (70), Expect = 0.21
 Identities = 17/45 (37%), Positives = 28/45 (62%)
 Frame = +3

Query: 354 ALGAVQVAGSVLASSIVERAGRKPLLLTTALVSGAXMCALATWFL 488
           A+  V +  S++A+ IV+R GR+PLLL +   +G  +C L  + L
Sbjct: 311 AISVVSMISSIVAAVIVDRNGRRPLLLIS--FAGILVCNLIIFAL 353


>Z48582-8|CAB70201.1| 3178|Caenorhabditis elegans Hypothetical
           protein ZK945.9 protein.
          Length = 3178

 Score = 29.1 bits (62), Expect = 1.9
 Identities = 14/41 (34%), Positives = 20/41 (48%)
 Frame = -3

Query: 475 ASAHMXAPDTSAVVSSSGFLPALSTMLEASTEPATCTAPSA 353
           AS     P TS V +S    P  ST+  +S+   T T P++
Sbjct: 437 ASTSTTEPSTSTVTTSPSTSPVTSTVTSSSSSSTTVTTPTS 477


>Z48544-10|CAB70192.1| 3178|Caenorhabditis elegans Hypothetical
           protein ZK945.9 protein.
          Length = 3178

 Score = 29.1 bits (62), Expect = 1.9
 Identities = 14/41 (34%), Positives = 20/41 (48%)
 Frame = -3

Query: 475 ASAHMXAPDTSAVVSSSGFLPALSTMLEASTEPATCTAPSA 353
           AS     P TS V +S    P  ST+  +S+   T T P++
Sbjct: 437 ASTSTTEPSTSTVTTSPSTSPVTSTVTSSSSSSTTVTTPTS 477


>Z66522-7|CAA91409.2|  472|Caenorhabditis elegans Hypothetical
           protein F14E5.1 protein.
          Length = 472

 Score = 28.7 bits (61), Expect = 2.5
 Identities = 11/39 (28%), Positives = 22/39 (56%)
 Frame = +3

Query: 354 ALGAVQVAGSVLASSIVERAGRKPLLLTTALVSGAXMCA 470
           A+G   V+G++    ++E+ GR+ LLL    ++   + A
Sbjct: 313 AMGLAYVSGTITGGIVIEKVGRRKLLLLFTFLNNLALIA 351


>Z66520-13|CAA91392.2|  472|Caenorhabditis elegans Hypothetical
           protein F14E5.1 protein.
          Length = 472

 Score = 28.7 bits (61), Expect = 2.5
 Identities = 11/39 (28%), Positives = 22/39 (56%)
 Frame = +3

Query: 354 ALGAVQVAGSVLASSIVERAGRKPLLLTTALVSGAXMCA 470
           A+G   V+G++    ++E+ GR+ LLL    ++   + A
Sbjct: 313 AMGLAYVSGTITGGIVIEKVGRRKLLLLFTFLNNLALIA 351


>AF067607-9|AAF98609.1|  460|Caenorhabditis elegans Collagen protein
           102 protein.
          Length = 460

 Score = 28.7 bits (61), Expect = 2.5
 Identities = 17/52 (32%), Positives = 22/52 (42%), Gaps = 3/52 (5%)
 Frame = -3

Query: 457 APDTSAVVSSSGFLPALSTMLEAS---TEPATCTAPSAMACWLGESGGRAPP 311
           APD +A    +   P  +   E +    EPA     +A A   G  GG APP
Sbjct: 390 APDAAAAAPEAAAAPEAAPAAEGAGGGAEPAGAAPEAAAAAPEGAGGGEAPP 441


>Z83113-3|CAB05545.1|  479|Caenorhabditis elegans Hypothetical
           protein K08H10.6 protein.
          Length = 479

 Score = 28.3 bits (60), Expect = 3.3
 Identities = 19/61 (31%), Positives = 33/61 (54%)
 Frame = +3

Query: 267 IPVLNFAGEIFTLAAGGARPPLSPNQQAMALGAVQVAGSVLASSIVERAGRKPLLLTTAL 446
           I  ++F G  F L   G  P  S    ++   A  +  ++LA+  +++ GR+PLL+T+ L
Sbjct: 294 IVAISFFGT-FLLQTIGFSPEGSAVANSLCSFA-SIVSALLAAIAMDKIGRRPLLITSLL 351

Query: 447 V 449
           V
Sbjct: 352 V 352


>AC024772-3|AAF60538.1| 2344|Caenorhabditis elegans Hypothetical
            protein Y40C5A.3 protein.
          Length = 2344

 Score = 28.3 bits (60), Expect = 3.3
 Identities = 20/83 (24%), Positives = 36/83 (43%), Gaps = 1/83 (1%)
 Frame = -3

Query: 502  PNRRHRNHVASAHMXAPDTSAVVSSSGFLPALSTMLEASTEPATCTAPSAMACWLGESGG 323
            P+    +   + H+ A   SA + + G  P+    L+  T+    + PSA+  W   S  
Sbjct: 1372 PSASPESTTVTEHIDAETNSATIPTIGTPPS---PLKPKTKLGLTSHPSAIPPWAISSKT 1428

Query: 322  RAPPAASVKIS-PAKLSTGMAPH 257
             APP A   ++ P+ ++     H
Sbjct: 1429 LAPPVAPPTVTVPSNIAPSTTGH 1451


>AL132898-6|CAC14409.1|  187|Caenorhabditis elegans Hypothetical
           protein Y59A8B.9 protein.
          Length = 187

 Score = 27.9 bits (59), Expect = 4.4
 Identities = 14/53 (26%), Positives = 19/53 (35%)
 Frame = -3

Query: 457 APDTSAVVSSSGFLPALSTMLEASTEPATCTAPSAMACWLGESGGRAPPAASV 299
           AP T    S S   P  +     +  P TC  P   A  +  +   APP   +
Sbjct: 49  APPTRPTPSRSSAAPRATAPTPTAAPPKTCAPPVRSASTVAAAAAAAPPGVDM 101


>AL132898-5|CAC14408.1|  316|Caenorhabditis elegans Hypothetical
           protein Y59A8B.7 protein.
          Length = 316

 Score = 27.9 bits (59), Expect = 4.4
 Identities = 14/53 (26%), Positives = 19/53 (35%)
 Frame = -3

Query: 457 APDTSAVVSSSGFLPALSTMLEASTEPATCTAPSAMACWLGESGGRAPPAASV 299
           AP T    S S   P  +     +  P TC  P   A  +  +   APP   +
Sbjct: 178 APPTRPTPSRSSAAPRATAPTPTAAPPKTCAPPVRSASTVAAAAAAAPPGVDM 230


>Z68317-3|CAA92687.1|  599|Caenorhabditis elegans Hypothetical
           protein T01H3.3 protein.
          Length = 599

 Score = 27.5 bits (58), Expect = 5.8
 Identities = 16/44 (36%), Positives = 24/44 (54%)
 Frame = +3

Query: 339 NQQAMALGAVQVAGSVLASSIVERAGRKPLLLTTALVSGAXMCA 470
           N  A A+GA+ +   VL +S+  +AG   LLL + L  G  + A
Sbjct: 457 NFTAFAIGAILMIAIVLVASLQTKAGLFSLLLISMLPFGLAIVA 500


>AF024502-2|AAK77623.1|  591|Caenorhabditis elegans Hypothetical
           protein M151.4 protein.
          Length = 591

 Score = 27.5 bits (58), Expect = 5.8
 Identities = 13/43 (30%), Positives = 26/43 (60%)
 Frame = -3

Query: 490 HRNHVASAHMXAPDTSAVVSSSGFLPALSTMLEASTEPATCTA 362
           H++  +     AP++++  +SSG  PA+++ L   +EP T +A
Sbjct: 517 HQSTSSEPASSAPNSNSSPNSSGMSPAVTSYLSNISEPFTFSA 559


>AC024843-10|AAF60845.2|  526|Caenorhabditis elegans Hypothetical
           protein Y61A9LA.1 protein.
          Length = 526

 Score = 27.5 bits (58), Expect = 5.8
 Identities = 11/35 (31%), Positives = 24/35 (68%)
 Frame = +3

Query: 348 AMALGAVQVAGSVLASSIVERAGRKPLLLTTALVS 452
           + A G +++  +++   +V+R GR+PL++ + LVS
Sbjct: 360 SFATGLLRLPFTLVPVFLVDRLGRRPLIIVSMLVS 394


>Z50071-4|CAA90409.2| 1301|Caenorhabditis elegans Hypothetical
           protein T07D4.3 protein.
          Length = 1301

 Score = 27.1 bits (57), Expect = 7.7
 Identities = 14/34 (41%), Positives = 21/34 (61%)
 Frame = +3

Query: 378 GSVLASSIVERAGRKPLLLTTALVSGAXMCALAT 479
           G +LA   +E    K L+L TAL +G+ MC +A+
Sbjct: 861 GKMLARMPIEPVIAKVLILGTALGAGSVMCDVAS 894


>Z46381-4|CAA86519.2|  604|Caenorhabditis elegans Hypothetical
           protein M01F1.5 protein.
          Length = 604

 Score = 27.1 bits (57), Expect = 7.7
 Identities = 18/76 (23%), Positives = 36/76 (47%)
 Frame = +3

Query: 261 GAIPVLNFAGEIFTLAAGGARPPLSPNQQAMALGAVQVAGSVLASSIVERAGRKPLLLTT 440
           G   V+ + G I  + + G +   +    ++   A+   G+ +  ++VER GR+ LLL +
Sbjct: 297 GINTVMYYTGNI--IRSAGVKDNHTTIWISVGTSAINFLGTFIPIALVERVGRRVLLLVS 354

Query: 441 ALVSGAXMCALATWFL 488
            +     + A+   FL
Sbjct: 355 MIGVILFLIAMGVSFL 370


>U41105-5|AAA82398.1|  390|Caenorhabditis elegans Hypothetical
           protein T02G5.7 protein.
          Length = 390

 Score = 27.1 bits (57), Expect = 7.7
 Identities = 17/46 (36%), Positives = 29/46 (63%), Gaps = 1/46 (2%)
 Frame = +3

Query: 291 EIFTLAAGGARPPLSPNQQAMA-LGAVQVAGSVLASSIVERAGRKP 425
           ++F L+  GAR P+   + + A  GAV++ G+V A + +ER+G  P
Sbjct: 5   KVFILS--GARTPIGAYRGSFANFGAVEL-GTVAAKAAIERSGVAP 47


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,137,012
Number of Sequences: 27780
Number of extensions: 102132
Number of successful extensions: 468
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 450
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 468
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 967231538
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)