Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV32540
         (606 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT029645-1|ABL75704.1|  269|Drosophila melanogaster IP17216p pro...   224   8e-59
AE014296-329|AAF47545.1|  277|Drosophila melanogaster CG7977-PA ...   224   8e-59
DQ450529-1|ABE27283.1|  277|Drosophila melanogaster L23A ribosom...   222   3e-58
AF080130-1|AAD19340.1|  269|Drosophila melanogaster ribosomal pr...   217   7e-57
BT021430-1|AAX33578.1|  290|Drosophila melanogaster GM06171p pro...    57   2e-08
AY051483-1|AAK92907.1|  684|Drosophila melanogaster GH14368p pro...    29   6.5  
AE014296-433|AAF47628.1|  684|Drosophila melanogaster CG5714-PA ...    29   6.5  
EF078695-1|ABK63801.1|  786|Drosophila melanogaster Yurt delta p...    28   8.6  
BT015265-1|AAT94494.1|  972|Drosophila melanogaster LD33734p pro...    28   8.6  
AY061133-1|AAL28681.1|  729|Drosophila melanogaster LD11531p pro...    28   8.6  
AE014297-1692|AAF54951.1|  972|Drosophila melanogaster CG9764-PA...    28   8.6  

>BT029645-1|ABL75704.1|  269|Drosophila melanogaster IP17216p
           protein.
          Length = 269

 Score =  224 bits (547), Expect = 8e-59
 Identities = 103/136 (75%), Positives = 118/136 (86%)
 Frame = -3

Query: 427 ALKAQRKVVKGEHGKRVRKIRNSVHFRRPKTFEPPRHPKYPRKSLXKRNRMDAYNIIKFP 248
           A K Q+K++KG  G R RKIR +VHFRRP T + PR PKYPRKS+  RNRMDAYNIIK+P
Sbjct: 134 AKKVQKKIIKGAFGTRARKIRTNVHFRRPTTLKLPRSPKYPRKSVPTRNRMDAYNIIKYP 193

Query: 247 LTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTLIRPDGKKKAYVRL 68
           LT+EAAMKKIEDNNTLVF+ H  ANK+H++AAV+KLYDI VAKVN LIRPDG+KKAYVRL
Sbjct: 194 LTTEAAMKKIEDNNTLVFLTHLRANKNHVRAAVRKLYDIKVAKVNVLIRPDGQKKAYVRL 253

Query: 67  ARDYDALDVANKIGII 20
           ARDYDALD+ANKIGII
Sbjct: 254 ARDYDALDIANKIGII 269


>AE014296-329|AAF47545.1|  277|Drosophila melanogaster CG7977-PA
           protein.
          Length = 277

 Score =  224 bits (547), Expect = 8e-59
 Identities = 103/136 (75%), Positives = 118/136 (86%)
 Frame = -3

Query: 427 ALKAQRKVVKGEHGKRVRKIRNSVHFRRPKTFEPPRHPKYPRKSLXKRNRMDAYNIIKFP 248
           A K Q+K++KG  G R RKIR +VHFRRP T + PR PKYPRKS+  RNRMDAYNIIK+P
Sbjct: 142 AKKVQKKIIKGAFGTRARKIRTNVHFRRPTTLKLPRSPKYPRKSVPTRNRMDAYNIIKYP 201

Query: 247 LTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTLIRPDGKKKAYVRL 68
           LT+EAAMKKIEDNNTLVF+ H  ANK+H++AAV+KLYDI VAKVN LIRPDG+KKAYVRL
Sbjct: 202 LTTEAAMKKIEDNNTLVFLTHLRANKNHVRAAVRKLYDIKVAKVNVLIRPDGQKKAYVRL 261

Query: 67  ARDYDALDVANKIGII 20
           ARDYDALD+ANKIGII
Sbjct: 262 ARDYDALDIANKIGII 277


>DQ450529-1|ABE27283.1|  277|Drosophila melanogaster L23A ribosomal
           protein naturalvariant protein.
          Length = 277

 Score =  222 bits (543), Expect = 3e-58
 Identities = 103/136 (75%), Positives = 117/136 (86%)
 Frame = -3

Query: 427 ALKAQRKVVKGEHGKRVRKIRNSVHFRRPKTFEPPRHPKYPRKSLXKRNRMDAYNIIKFP 248
           A K Q+K++KG  G R RKIR +VHFRRP T + PR PKYPRKS+  RNRMDAYNIIK+P
Sbjct: 142 AKKVQKKIIKGAFGTRARKIRANVHFRRPTTLKLPRSPKYPRKSVPTRNRMDAYNIIKYP 201

Query: 247 LTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTLIRPDGKKKAYVRL 68
           LT+EAAMKKIEDNNTLVF+ H  ANK H++AAV+KLYDI VAKVN LIRPDG+KKAYVRL
Sbjct: 202 LTTEAAMKKIEDNNTLVFLTHLRANKSHVRAAVRKLYDIKVAKVNVLIRPDGQKKAYVRL 261

Query: 67  ARDYDALDVANKIGII 20
           ARDYDALD+ANKIGII
Sbjct: 262 ARDYDALDIANKIGII 277


>AF080130-1|AAD19340.1|  269|Drosophila melanogaster ribosomal
           protein L23a protein.
          Length = 269

 Score =  217 bits (531), Expect = 7e-57
 Identities = 102/136 (75%), Positives = 117/136 (86%)
 Frame = -3

Query: 427 ALKAQRKVVKGEHGKRVRKIRNSVHFRRPKTFEPPRHPKYPRKSLXKRNRMDAYNIIKFP 248
           A K Q+K++K   G R RKIR +VHFRRP T + PR PKYPRKS+  RNRMDAYNIIK+P
Sbjct: 135 AKKVQKKIIKA-FGTRARKIRTNVHFRRPTTLKLPRSPKYPRKSVPTRNRMDAYNIIKYP 193

Query: 247 LTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDINVAKVNTLIRPDGKKKAYVRL 68
           LT+EAAMKKIEDNNTLVF+ H  ANK+H++AAV+KLYDI VAKVN LIRPDG+KKAYVRL
Sbjct: 194 LTTEAAMKKIEDNNTLVFLTHLRANKNHVRAAVRKLYDIKVAKVNVLIRPDGQKKAYVRL 253

Query: 67  ARDYDALDVANKIGII 20
           ARDYDALD+ANKIGII
Sbjct: 254 ARDYDALDIANKIGII 269


>BT021430-1|AAX33578.1|  290|Drosophila melanogaster GM06171p
           protein.
          Length = 290

 Score = 56.8 bits (131), Expect = 2e-08
 Identities = 36/104 (34%), Positives = 56/104 (53%), Gaps = 2/104 (1%)
 Frame = -2

Query: 311 VPKKVSA*EKSHGCLQHH*IPSHV*SSNEED*R*QHLGLYCPHK-CKQAPYQGC-SQETL 138
           VP+++ A ++ HG +QHH +P+     +EED   QH GL  PH   +Q   + C S + L
Sbjct: 163 VPQEIGAHQEPHGRVQHHQVPTDHRGGHEEDRGQQHPGL--PHTPARQQEPRACRSAQAL 220

Query: 137 *YKCC*SQHSHQA*W*EESVXXXXXXXXRIGRCQQNWHHINCSI 6
            ++    + +H A W EE +        R G CQQ+ HHI+ +I
Sbjct: 221 RHQGGQGERAHPARWPEEGLCAPGARLRRPGHCQQDRHHISAAI 264


>AY051483-1|AAK92907.1|  684|Drosophila melanogaster GH14368p
           protein.
          Length = 684

 Score = 28.7 bits (61), Expect = 6.5
 Identities = 21/76 (27%), Positives = 36/76 (47%)
 Frame = -1

Query: 327 LLGTLSTQESLCXREIAWMPTTSLNSLSRLKQQ*RRLKITTPWSLLSTQVQTSTISRLQS 148
           L   LS Q+ L  + + W  T  ++   R K+Q   LK+ +   +L+TQ +     +L+ 
Sbjct: 290 LYAMLSHQQYLPEKRLGWHLTDPVSEPERYKEQLLGLKLASGLEILATQAKRVEGQQLED 349

Query: 147 RNSMI*MLLKSTLSSG 100
             +     L+S LS G
Sbjct: 350 LPAWR-SYLRSLLSKG 364


>AE014296-433|AAF47628.1|  684|Drosophila melanogaster CG5714-PA
           protein.
          Length = 684

 Score = 28.7 bits (61), Expect = 6.5
 Identities = 21/76 (27%), Positives = 36/76 (47%)
 Frame = -1

Query: 327 LLGTLSTQESLCXREIAWMPTTSLNSLSRLKQQ*RRLKITTPWSLLSTQVQTSTISRLQS 148
           L   LS Q+ L  + + W  T  ++   R K+Q   LK+ +   +L+TQ +     +L+ 
Sbjct: 290 LYAMLSHQQYLPEKRLGWHLTDPVSEPERYKEQLLGLKLASGLEILATQAKRVEGQQLED 349

Query: 147 RNSMI*MLLKSTLSSG 100
             +     L+S LS G
Sbjct: 350 LPAWR-SYLRSLLSKG 364


>EF078695-1|ABK63801.1|  786|Drosophila melanogaster Yurt delta
           protein.
          Length = 786

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 21/76 (27%), Positives = 35/76 (46%), Gaps = 8/76 (10%)
 Frame = -3

Query: 265 NIIKFPLTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDIN--------VAKVNT 110
           +I+K P  S  A + I D N++   ++ + +  H    +K+L + N        +A VNT
Sbjct: 603 SIVKDPSPSVLANEAINDANSIRVTINKTFDMDHNTETLKRLSNANEKPNNQVKLANVNT 662

Query: 109 LIRPDGKKKAYVRLAR 62
              P G  K  +  AR
Sbjct: 663 TALPPGNIKCNILKAR 678


>BT015265-1|AAT94494.1|  972|Drosophila melanogaster LD33734p
           protein.
          Length = 972

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 21/76 (27%), Positives = 35/76 (46%), Gaps = 8/76 (10%)
 Frame = -3

Query: 265 NIIKFPLTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDIN--------VAKVNT 110
           +I+K P  S  A + I D N++   ++ + +  H    +K+L + N        +A VNT
Sbjct: 603 SIVKDPSPSVLANEAINDANSIRVTINKTFDMDHNTETLKRLSNANEKPNNQVKLANVNT 662

Query: 109 LIRPDGKKKAYVRLAR 62
              P G  K  +  AR
Sbjct: 663 TALPPGNIKCNILKAR 678


>AY061133-1|AAL28681.1|  729|Drosophila melanogaster LD11531p
           protein.
          Length = 729

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 21/76 (27%), Positives = 35/76 (46%), Gaps = 8/76 (10%)
 Frame = -3

Query: 265 NIIKFPLTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDIN--------VAKVNT 110
           +I+K P  S  A + I D N++   ++ + +  H    +K+L + N        +A VNT
Sbjct: 360 SIVKDPSPSVLANEAINDANSIRVTINKTFDMDHNTETLKRLSNANEKPNNQVKLANVNT 419

Query: 109 LIRPDGKKKAYVRLAR 62
              P G  K  +  AR
Sbjct: 420 TALPPGNIKCNILKAR 435


>AE014297-1692|AAF54951.1|  972|Drosophila melanogaster CG9764-PA
           protein.
          Length = 972

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 21/76 (27%), Positives = 35/76 (46%), Gaps = 8/76 (10%)
 Frame = -3

Query: 265 NIIKFPLTSEAAMKKIEDNNTLVFIVHTSANKHHIKAAVKKLYDIN--------VAKVNT 110
           +I+K P  S  A + I D N++   ++ + +  H    +K+L + N        +A VNT
Sbjct: 603 SIVKDPSPSVLANEAINDANSIRVTINKTFDMDHNTETLKRLSNANEKPNNQVKLANVNT 662

Query: 109 LIRPDGKKKAYVRLAR 62
              P G  K  +  AR
Sbjct: 663 TALPPGNIKCNILKAR 678


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,389,255
Number of Sequences: 53049
Number of extensions: 399607
Number of successful extensions: 1158
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1143
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1158
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2482967880
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)