Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV32531
(630 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC1815.01 |eno101|eno1|enolase|Schizosaccharomyces pombe|chr 2... 277 7e-76
SPBPB21E7.01c |eno102|eno1, SPBPB8B6.07c, eno1|enolase |Schizosa... 253 1e-68
SPBC4B4.10c |mug77|atg5|autophagy associated protein Atg5 |Schiz... 31 0.14
SPCC1442.06 |||20S proteasome component alpha 2|Schizosaccharomy... 28 0.97
SPAC23G3.08c |ubp7||ubiquitin C-terminal hydrolase Ubp7|Schizosa... 27 1.7
SPAPB21F2.02 |||Dopey family protein|Schizosaccharomyces pombe|c... 26 3.9
SPCC290.03c |nup186||nucleoporin Nup186|Schizosaccharomyces pomb... 26 5.2
SPCC569.03 |||DUF1773 family protein 4|Schizosaccharomyces pombe... 26 5.2
SPAC823.12 |||zinc finger protein Pep5/Vps11 |Schizosaccharomyce... 26 5.2
SPBC2F12.05c |||sterol binding ankyrin repeat protein|Schizosacc... 25 9.0
SPMIT.06 |||mitochondrial DNA binding endonuclease|Schizosacchar... 25 9.0
>SPBC1815.01 |eno101|eno1|enolase|Schizosaccharomyces pombe|chr
2|||Manual
Length = 439
Score = 277 bits (680), Expect = 7e-76
Identities = 133/210 (63%), Positives = 165/210 (78%), Gaps = 1/210 (0%)
Frame = +2
Query: 2 MVIKSIKARQIFDSRGNPTVEVDLVTELGLFRAAVPSGASTGVHEALELRDNIKSEYHGK 181
M I+ + ARQI+DSRGNPTVEVDL TE G+ RA VPSGASTG+ EALE+RD K+++ GK
Sbjct: 1 MAIQKVFARQIYDSRGNPTVEVDLTTETGIHRAIVPSGASTGIWEALEMRDGDKTKWGGK 60
Query: 182 GVLTAIKNINELIAPELTKANLEVTQQREIDELMLKLDGTENKSKLGANAILGVSLTVAX 361
GVL A+ N+N +IAP + KANL+VT Q+ DE +LKLDGTENKSKLGANAILGVS+ +
Sbjct: 61 GVLKAVGNVNNIIAPAVVKANLDVTDQKAADEFLLKLDGTENKSKLGANAILGVSMAICR 120
Query: 362 AGAAKKNVPLYKHLADLAG-NNDIVLPVPAFNVINGGSHAGNKLAMQEFMIFPTGASTFS 538
AGAA+K +PL+K++A+ G VLPVP+FNV+NGGSHAG LA QEFMI PTGA +FS
Sbjct: 121 AGAAQKKLPLWKYIAENFGTKGPYVLPVPSFNVLNGGSHAGGDLAFQEFMILPTGAPSFS 180
Query: 539 EAMRMGSEVYHHLKKIIKEKFGLDSTAVGD 628
EAMR G+E YH LK I K+++G + VGD
Sbjct: 181 EAMRWGAETYHTLKSIAKKRYGSSAGNVGD 210
>SPBPB21E7.01c |eno102|eno1, SPBPB8B6.07c, eno1|enolase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 440
Score = 253 bits (620), Expect = 1e-68
Identities = 122/208 (58%), Positives = 156/208 (75%), Gaps = 1/208 (0%)
Frame = +2
Query: 8 IKSIKARQIFDSRGNPTVEVDLVTELGLFRAAVPSGASTGVHEALELRDNIKSEYHGKGV 187
I+ I +R I+DSRGNPTVEV+L TELG FR+ VPSGASTG EA ELRDN K+++ GKGV
Sbjct: 4 IQKIYSRSIYDSRGNPTVEVELTTELGTFRSMVPSGASTGEWEAKELRDNDKNKWGGKGV 63
Query: 188 LTAIKNINELIAPELTKANLEVTQQREIDELMLKLDGTENKSKLGANAILGVSLTVAXAG 367
A+ N+N +I P L K+++++T QR IDE M+KLDGT +KSKLGAN+I+GVS+ VA A
Sbjct: 64 TIAVHNVNNIIGPALVKSDIKITDQRGIDEFMIKLDGTNDKSKLGANSIVGVSMAVARAA 123
Query: 368 AAKKNVPLYKHLADLAGNNDI-VLPVPAFNVINGGSHAGNKLAMQEFMIFPTGASTFSEA 544
AA +PLY+++ LAG+ +PVP+FNV+NGG HAG LA QEFMI P A TFSE
Sbjct: 124 AAFLKIPLYEYIGKLAGSKTTECIPVPSFNVLNGGRHAGGDLAFQEFMIMPIKAPTFSEG 183
Query: 545 MRMGSEVYHHLKKIIKEKFGLDSTAVGD 628
+R GSEVYH LK + K+K+G + VGD
Sbjct: 184 LRWGSEVYHTLKALAKKKYGASAGNVGD 211
>SPBC4B4.10c |mug77|atg5|autophagy associated protein Atg5
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 261
Score = 31.1 bits (67), Expect = 0.14
Identities = 15/45 (33%), Positives = 24/45 (53%)
Frame = -1
Query: 555 PILMASLKVDAPVGKIMNSCMASLFPACDPPLITLKAGTGRTMSL 421
PI+ S + + +G+ +N + LFP+CD LI G T+ L
Sbjct: 192 PIIQTSAPLGSSLGEFLNKRLPDLFPSCDKFLIVKPVIHGITIFL 236
>SPCC1442.06 |||20S proteasome component alpha 2|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 245
Score = 28.3 bits (60), Expect = 0.97
Identities = 22/72 (30%), Positives = 32/72 (44%)
Frame = +2
Query: 38 DSRGNPTVEVDLVTELGLFRAAVPSGASTGVHEALELRDNIKSEYHGKGVLTAIKNINEL 217
D +G +VD ++A +ST LE R N + E V TAI + E
Sbjct: 140 DEKGPSLYQVDPSGTYFAWKATAIGKSSTAAKTFLEKRYNDELELDD-AVHTAILALKET 198
Query: 218 IAPELTKANLEV 253
ELT+ N+E+
Sbjct: 199 FEGELTEDNIEI 210
>SPAC23G3.08c |ubp7||ubiquitin C-terminal hydrolase
Ubp7|Schizosaccharomyces pombe|chr 1|||Manual
Length = 875
Score = 27.5 bits (58), Expect = 1.7
Identities = 15/57 (26%), Positives = 26/57 (45%)
Frame = +2
Query: 305 NKSKLGANAILGVSLTVAXAGAAKKNVPLYKHLADLAGNNDIVLPVPAFNVINGGSH 475
N S L A++ + + ++ K ++K ++AG N P FNV N +H
Sbjct: 418 NSSPLAASSTKSLPSSELLDSSSDKGQQVFKGQHEVAGTNSFEDPNSHFNVSNSSNH 474
>SPAPB21F2.02 |||Dopey family protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1687
Score = 26.2 bits (55), Expect = 3.9
Identities = 10/26 (38%), Positives = 17/26 (65%)
Frame = -3
Query: 310 FVLSAIQLKHEFINLSLLGYFKVGFG 233
F +S+I+ KH++IN+ Y +G G
Sbjct: 113 FSISSIKTKHDYINIIKKHYVSLGVG 138
>SPCC290.03c |nup186||nucleoporin Nup186|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1647
Score = 25.8 bits (54), Expect = 5.2
Identities = 18/77 (23%), Positives = 34/77 (44%)
Frame = +2
Query: 47 GNPTVEVDLVTELGLFRAAVPSGASTGVHEALELRDNIKSEYHGKGVLTAIKNINELIAP 226
G P + ++ LG F + S S + ++ + + +E H + K +NE +A
Sbjct: 1109 GEPILTQQVIQNLGGFSSEEVSMVSRCIRSRTQIMNMLATEIHYAASVGQNKYLNEYVA- 1167
Query: 227 ELTKANLEVTQQREIDE 277
L + N E T E+ +
Sbjct: 1168 SLIRTN-EKTHSTELSQ 1183
>SPCC569.03 |||DUF1773 family protein 4|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 396
Score = 25.8 bits (54), Expect = 5.2
Identities = 17/57 (29%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
Frame = +2
Query: 152 DNIKSEY-HGKGVLTAIKNINELIAPELTKANLEVTQQRE-IDELMLKLDGTENKSK 316
D++K E KG +T +KN + + E T EVT ++ I +L K+D + +++
Sbjct: 225 DSVKGEMAEMKGEMTIMKNDIDSVKGETTTLKGEVTAMKDSISQLDRKIDLLDQRTE 281
>SPAC823.12 |||zinc finger protein Pep5/Vps11 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 906
Score = 25.8 bits (54), Expect = 5.2
Identities = 9/26 (34%), Positives = 20/26 (76%)
Frame = -3
Query: 469 SSIDHIESWYR*NNVIISSQISQVLV 392
+S+++++SWY+ N I++ +SQ L+
Sbjct: 775 ASLENVDSWYQDINEIVNIIVSQRLI 800
>SPBC2F12.05c |||sterol binding ankyrin repeat
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1310
Score = 25.0 bits (52), Expect = 9.0
Identities = 19/42 (45%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Frame = +2
Query: 377 KNVPLYKHLADLAGNNDIVLPVPAFNVINGG-SHAGNKLAMQ 499
KN PL HLA +AG DIV + IN +A NK A Q
Sbjct: 89 KNTPL--HLAAMAGRQDIVEALLLHPDINYNLVNANNKKAYQ 128
>SPMIT.06 |||mitochondrial DNA binding
endonuclease|Schizosaccharomyces pombe|chr
mitochondrial|||Manual
Length = 807
Score = 25.0 bits (52), Expect = 9.0
Identities = 19/70 (27%), Positives = 35/70 (50%), Gaps = 2/70 (2%)
Frame = +2
Query: 107 PSGASTGVHEALELRDNIKSEYHGKGVLTAIKNINEL--IAPELTKANLEVTQQREIDEL 280
P A+ +H+ E +N+KSE+ KG + A K +E + + KA E + I ++
Sbjct: 429 PILANIYLHQLDEFIENLKSEFDYKGPI-ARKRTSESRHLHYLMAKAKRENADSKTIRKI 487
Query: 281 MLKLDGTENK 310
+++ NK
Sbjct: 488 AIEMRNVPNK 497
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,551,003
Number of Sequences: 5004
Number of extensions: 49075
Number of successful extensions: 112
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 108
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 110
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 279695522
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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