Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV32531
(630 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
09_03_0117 - 12486672-12486818,12487438-12487488,12487583-124877... 288 2e-78
10_02_0022 - 4290708-4290788,4291254-4291305,4291396-4291484,429... 264 4e-71
06_01_0262 - 1930552-1930632,1931096-1931152,1931236-1931287,193... 241 2e-64
03_02_0477 - 8770905-8770985,8771164-8771361,8771939-8772025,877... 192 2e-49
03_02_0365 - 7816966-7817046,7817441-7817492,7817590-7817678,781... 153 8e-38
07_03_0627 - 20061951-20062391,20062912-20062960,20063386-200638... 29 3.0
02_05_0063 - 25523140-25524405 29 3.0
01_01_0796 + 6190931-6192745 29 4.0
03_03_0152 + 14908778-14909344 28 5.3
07_03_0482 + 18589573-18589728,18589889-18590065,18590518-185906... 28 7.0
11_01_0660 + 5382460-5382764,5383854-5384348,5384454-5384541,538... 27 9.3
05_04_0312 - 20123892-20124085,20124183-20124508,20124728-201247... 27 9.3
>09_03_0117 -
12486672-12486818,12487438-12487488,12487583-12487729,
12488037-12488354,12488450-12488604,12488941-12489248,
12490644-12491038
Length = 506
Score = 288 bits (707), Expect = 2e-78
Identities = 142/209 (67%), Positives = 170/209 (81%), Gaps = 1/209 (0%)
Frame = +2
Query: 5 VIKSIKARQIFDSRGNPTVEVDLVTELG-LFRAAVPSGASTGVHEALELRDNIKSEYHGK 181
V++SI+ARQI DSRGNPTVEVDLV G L R+AVPSGASTG++EALELRD + Y GK
Sbjct: 50 VVRSIRARQIVDSRGNPTVEVDLVAGDGRLHRSAVPSGASTGIYEALELRDGDGAAYGGK 109
Query: 182 GVLTAIKNINELIAPELTKANLEVTQQREIDELMLKLDGTENKSKLGANAILGVSLTVAX 361
GVL A++NINE+IAP+L ++V Q ++D +ML +DGT NKSKLGANAILGVSL+V
Sbjct: 110 GVLNAVRNINEVIAPKLV--GVDVRNQSDVDAIMLDIDGTPNKSKLGANAILGVSLSVCR 167
Query: 362 AGAAKKNVPLYKHLADLAGNNDIVLPVPAFNVINGGSHAGNKLAMQEFMIFPTGASTFSE 541
AGA K VPLYKH+ +LAG ++V+PVPAFNVINGGSHAGN LAMQEFM+ P GAS+FSE
Sbjct: 168 AGAGAKEVPLYKHIQELAGTKELVMPVPAFNVINGGSHAGNNLAMQEFMLLPVGASSFSE 227
Query: 542 AMRMGSEVYHHLKKIIKEKFGLDSTAVGD 628
A+RMGSEVYH LK IIK K+G D+ VGD
Sbjct: 228 ALRMGSEVYHALKGIIKAKYGQDACNVGD 256
>10_02_0022 -
4290708-4290788,4291254-4291305,4291396-4291484,
4291565-4291615,4291699-4291893,4292010-4292090,
4292190-4292252,4292480-4292554,4292630-4292710,
4292784-4292888,4292977-4293057,4293156-4293242,
4293322-4293369,4293923-4293987,4294109-4294172,
4294828-4294896
Length = 428
Score = 264 bits (647), Expect = 4e-71
Identities = 140/215 (65%), Positives = 166/215 (77%), Gaps = 8/215 (3%)
Frame = +2
Query: 8 IKSIKARQIFDSRGNPTVEVDLVTELGLF-RAAVPSGASTGVHEALELRDNIKSEYHGKG 184
I S+KARQIFDSRGNPTVEVD+ G F RAAVPSGASTGV+EALELRD S+Y GKG
Sbjct: 5 IVSVKARQIFDSRGNPTVEVDVCCSDGTFARAAVPSGASTGVYEALELRDG-GSDYLGKG 63
Query: 185 VLTAIKNINELIAPELTKANLEVTQQREIDELMLK-LDGTEN-----KSKLGANAILGVS 346
V A+ N+N +IAP L + T Q E+D M++ LDGT+N K KLGANAIL VS
Sbjct: 64 VSKAVDNVNSVIAPALI--GKDPTSQAELDNFMVQQLDGTKNEWGWCKQKLGANAILAVS 121
Query: 347 LTVAXAGAAKKNVPLYKHLADLAGNNDIVLPVPAFNVINGGSHAGNKLAMQ-EFMIFPTG 523
L + AGA K +PLY+H+A+LAGN +VLPVPAFNVINGGSHAGNKLAMQ EFMI PTG
Sbjct: 122 LAICKAGAIIKKIPLYQHIANLAGNKQLVLPVPAFNVINGGSHAGNKLAMQAEFMILPTG 181
Query: 524 ASTFSEAMRMGSEVYHHLKKIIKEKFGLDSTAVGD 628
A++F EAM+MG EVYH+LK +IK+K+G D+T VGD
Sbjct: 182 AASFKEAMKMGVEVYHNLKSVIKKKYGQDATNVGD 216
>06_01_0262 -
1930552-1930632,1931096-1931152,1931236-1931287,
1931373-1931461,1931551-1931601,1931696-1931890,
1932015-1932095,1932205-1932267,1933045-1933119,
1933194-1933352,1933353-1933463,1933536-1933616,
1933721-1933807,1933920-1933967,1934357-1934421,
1935002-1935065,1935220-1935288
Length = 475
Score = 241 bits (591), Expect = 2e-64
Identities = 142/245 (57%), Positives = 167/245 (68%), Gaps = 36/245 (14%)
Frame = +2
Query: 2 MVIKSIKARQIFDSRGNPTVEVDLVTELGLF-RAAVPSGASTGVHEALELRDNIKSEYHG 178
+ I+S+KARQIFDSRGNPTVEVD+ G F R AVPSGASTG++EALELRD S+Y G
Sbjct: 3 VTIQSVKARQIFDSRGNPTVEVDVGLSDGSFARGAVPSGASTGIYEALELRDG-GSDYLG 61
Query: 179 KGVLTAIKNINELIAPELTKANLEVTQQREIDELMLK-LDGTEN-----KSKLGANAILG 340
KGVL A+ N+N +I P L + T+Q +ID M++ LDGT N K KLGANAIL
Sbjct: 62 KGVLKAVSNVNTIIGPALI--GKDPTEQVDIDNFMVQQLDGTSNNWGWCKQKLGANAILA 119
Query: 341 VSLTVAXAGAAKKNVPLYK---HLADLAGNNDIVLPVPAFNVINGGSHAGNKLAM----- 496
VSL V AGA K +PLY+ H+A+LAGN +VLPVPAFNVINGGSHAGNKLAM
Sbjct: 120 VSLAVCKAGAMVKKIPLYQKLQHIANLAGNKTLVLPVPAFNVINGGSHAGNKLAMQVKYC 179
Query: 497 ---------------------QEFMIFPTGASTFSEAMRMGSEVYHHLKKIIKEKFGLDS 613
QEFMI PTGAS+F EAM+MG EVYHHLK IIK+K+G D+
Sbjct: 180 LNNKTMSMHDSVIFSAHLAAVQEFMILPTGASSFKEAMKMGVEVYHHLKSIIKKKYGQDA 239
Query: 614 TAVGD 628
T VGD
Sbjct: 240 TNVGD 244
>03_02_0477 -
8770905-8770985,8771164-8771361,8771939-8772025,
8772094-8772179,8772270-8772368,8772431-8772551,
8773251-8773331,8773643-8773723,8773972-8774088,
8774185-8774256,8774621-8775055
Length = 485
Score = 192 bits (468), Expect = 2e-49
Identities = 95/208 (45%), Positives = 133/208 (63%)
Frame = +2
Query: 5 VIKSIKARQIFDSRGNPTVEVDLVTELGLFRAAVPSGASTGVHEALELRDNIKSEYHGKG 184
VI S++ARQI D RG P VEV L T + RA+ + + A +RD K + +
Sbjct: 46 VITSVRARQILDGRGEPAVEVSLHTNKAVHRASAAAADAPEGAAADAVRDAEKRKLLARA 105
Query: 185 VLTAIKNINELIAPELTKANLEVTQQREIDELMLKLDGTENKSKLGANAILGVSLTVAXA 364
V A++ IN+ ++ L ++ QQ +ID+ ++ LD +K+++G N++L VS+ A
Sbjct: 106 VADAVRVINDKVSEALV--GMDPQQQSQIDQAIMDLDKAHHKAEIGVNSMLAVSIAACKA 163
Query: 365 GAAKKNVPLYKHLADLAGNNDIVLPVPAFNVINGGSHAGNKLAMQEFMIFPTGASTFSEA 544
GAA+K VPLYKH+A+L G + LP+PA VINGG+HAGN L +QE MI P GA F EA
Sbjct: 164 GAAEKEVPLYKHIAELVGKSATTLPIPAITVINGGTHAGNSLPIQEIMILPVGAKNFEEA 223
Query: 545 MRMGSEVYHHLKKIIKEKFGLDSTAVGD 628
M+MGSE YHHLK II EK+G +S +GD
Sbjct: 224 MQMGSETYHHLKDIILEKYGSNSCNIGD 251
>03_02_0365 -
7816966-7817046,7817441-7817492,7817590-7817678,
7817762-7817854,7817900-7818094,7818172-7818249,
7818353-7818415,7818806-7818880,7818958-7819038,
7819329-7819409,7819516-7819602,7819682-7819729,
7820317-7820381,7820566-7820629,7821254-7821322
Length = 406
Score = 153 bits (372), Expect = 8e-38
Identities = 104/210 (49%), Positives = 131/210 (62%), Gaps = 3/210 (1%)
Frame = +2
Query: 8 IKSIKARQIFDSRGNPTVEVDLVTELGLF-RAAVPSGASTGVHEALELRDNIKSEYHGKG 184
I+S+KARQIFDSRGNPTVEVD+ G F RAAVPSGASTGV+EALELRD S+Y GKG
Sbjct: 5 IQSVKARQIFDSRGNPTVEVDICCSDGTFARAAVPSGASTGVYEALELRDG-GSDYLGKG 63
Query: 185 VLTAIKNINELIAPELTKANLEVTQQREIDELMLK-LDGTENKSKLG-ANAILGVSLTVA 358
VL A+ N+N +I P L + T+Q ID M++ LDGT K++ G LG + +A
Sbjct: 64 VLKAVDNVNSIIGPALI--GKDPTEQTVIDNFMVQQLDGT--KNEWGWCKQKLGANAILA 119
Query: 359 XAGAAKKNVPLYKHLADLAGNNDIVLPVPAFNVINGGSHAGNKLAMQEFMIFPTGASTFS 538
+ A K AG I+ +P + QEFMI PTGAS+F
Sbjct: 120 VSLALCK-----------AGA--IIKKIPLY---------------QEFMILPTGASSFK 151
Query: 539 EAMRMGSEVYHHLKKIIKEKFGLDSTAVGD 628
EAM+MG EVYH+LK +IK+K+G D+T VGD
Sbjct: 152 EAMKMGVEVYHNLKSVIKKKYGQDATNVGD 181
>07_03_0627 - 20061951-20062391,20062912-20062960,20063386-20063851,
20063933-20064139,20064267-20064405,20065146-20065282,
20065414-20065657,20065808-20065969,20066049-20066167,
20066240-20066314,20066327-20066500,20066607-20066769,
20067211-20067420,20067515-20067668,20067761-20067839,
20067999-20068146,20068501-20068671,20068771-20069385
Length = 1250
Score = 29.1 bits (62), Expect = 3.0
Identities = 16/48 (33%), Positives = 26/48 (54%)
Frame = +2
Query: 86 GLFRAAVPSGASTGVHEALELRDNIKSEYHGKGVLTAIKNINELIAPE 229
GL +A + SGA + A+E D+ YHG V +++N +IA +
Sbjct: 1124 GLVKAFMDSGAKAVISSAMEPPDSQSIVYHGMEVNGSLENGKFVIADD 1171
>02_05_0063 - 25523140-25524405
Length = 421
Score = 29.1 bits (62), Expect = 3.0
Identities = 24/84 (28%), Positives = 31/84 (36%), Gaps = 1/84 (1%)
Frame = -1
Query: 576 KWWYTSEPILMASLKVDAPVGKIMNSCMASLFPACDPPLITLKAGTGRTMSLFPAKSAKC 397
K W + + KV P + + C A P PP G G S + K A
Sbjct: 138 KRWMDAHQVYAQLEKVFGPARRDLLRCSAEFLPKGPPPEFAEDPGAGPGPSSWKRKRAAA 197
Query: 396 LYSGTFFL-AAPALATVKETPRIA 328
+ TF A + TVK PR A
Sbjct: 198 AAANTFAADAVKPIRTVK--PRAA 219
>01_01_0796 + 6190931-6192745
Length = 604
Score = 28.7 bits (61), Expect = 4.0
Identities = 17/75 (22%), Positives = 36/75 (48%)
Frame = +2
Query: 86 GLFRAAVPSGASTGVHEALELRDNIKSEYHGKGVLTAIKNINELIAPELTKANLEVTQQR 265
GLF+ A TG A+ + D +S++H G T ++ ++ ++ +A E
Sbjct: 29 GLFKCASDLSILTGASVAVVIEDQNRSKFHAVGTPTVQAVVDAALSSDVEEAAAEARPVA 88
Query: 266 EIDELMLKLDGTENK 310
+ ++LM ++ E +
Sbjct: 89 D-EQLMERIAPLERE 102
>03_03_0152 + 14908778-14909344
Length = 188
Score = 28.3 bits (60), Expect = 5.3
Identities = 18/40 (45%), Positives = 21/40 (52%)
Frame = -1
Query: 480 PACDPPLITLKAGTGRTMSLFPAKSAKCLYSGTFFLAAPA 361
PA D + LK TG L PA+ A CL+ G AAPA
Sbjct: 44 PASDEAIEALKDVTGDIDQL-PAECAICLHGGLDAAAAPA 82
>07_03_0482 +
18589573-18589728,18589889-18590065,18590518-18590688,
18590913-18591029,18591614-18591742,18592210-18592311,
18592412-18592498,18592585-18592638,18594880-18595016,
18595181-18595235,18596133-18596188,18596275-18596334,
18596442-18596529,18596634-18597371,18597451-18597511,
18598301-18598403,18599180-18599311,18599393-18599477
Length = 835
Score = 27.9 bits (59), Expect = 7.0
Identities = 12/37 (32%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Frame = -3
Query: 184 SLAMIFTLDVISQFKS-FMNTSGCTRGYSCPEQAKLC 77
SLA+ +DV+ + S + + + CT+G+ P +LC
Sbjct: 658 SLALPVAMDVVDEILSNYKSNAVCTKGHQFPRGNRLC 694
>11_01_0660 +
5382460-5382764,5383854-5384348,5384454-5384541,
5384629-5384691,5384965-5385125,5385214-5385289,
5385395-5385454,5385555-5385662,5385746-5385982,
5386192-5386307,5386756-5386813
Length = 588
Score = 27.5 bits (58), Expect = 9.3
Identities = 13/37 (35%), Positives = 23/37 (62%), Gaps = 2/37 (5%)
Frame = +2
Query: 149 RDNIKSEYHGKGVL--TAIKNINELIAPELTKANLEV 253
RD + + GKG + T+ ++++ L P+LT NL+V
Sbjct: 518 RDTFPTSFDGKGAMVQTSNRSLSPLRDPDLTMRNLQV 554
>05_04_0312 -
20123892-20124085,20124183-20124508,20124728-20124732,
20125063-20125670,20125744-20125884,20126067-20126194,
20126288-20126329,20126613-20126755
Length = 528
Score = 27.5 bits (58), Expect = 9.3
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = -1
Query: 528 DAPVGKIMNSCMASLFPACDPPLITLKA 445
DA + ++ N C+ LFPA D L +KA
Sbjct: 375 DAEINEMANDCLKKLFPAAD-DLTAIKA 401
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,953,703
Number of Sequences: 37544
Number of extensions: 334405
Number of successful extensions: 823
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 790
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 809
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1537558360
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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