Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV32531
(630 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z68318-8|CAH10783.1| 465|Caenorhabditis elegans Hypothetical pr... 312 1e-85
Z68318-2|CAA92692.1| 434|Caenorhabditis elegans Hypothetical pr... 312 1e-85
Z68318-3|CAD57704.1| 337|Caenorhabditis elegans Hypothetical pr... 193 8e-50
Z82266-16|CAJ80812.1| 423|Caenorhabditis elegans Hypothetical p... 29 3.6
Z68213-10|CAJ80816.1| 423|Caenorhabditis elegans Hypothetical p... 29 3.6
U56864-1|AAB04059.1| 355|Caenorhabditis elegans EGL-30 protein. 28 4.8
AY008139-1|AAG32092.1| 355|Caenorhabditis elegans heterotrimeri... 28 4.8
AF003739-2|AAM15593.1| 303|Caenorhabditis elegans Egg laying de... 28 4.8
AF003739-1|AAB58071.1| 355|Caenorhabditis elegans Egg laying de... 28 4.8
>Z68318-8|CAH10783.1| 465|Caenorhabditis elegans Hypothetical
protein T21B10.2c protein.
Length = 465
Score = 312 bits (766), Expect = 1e-85
Identities = 151/209 (72%), Positives = 173/209 (82%)
Frame = +2
Query: 2 MVIKSIKARQIFDSRGNPTVEVDLVTELGLFRAAVPSGASTGVHEALELRDNIKSEYHGK 181
M I I ARQI+DSRGNPTVEVDL TE G+FRAAVPSGASTGVHEALELRD K+ + GK
Sbjct: 32 MPITKIHARQIYDSRGNPTVEVDLFTEKGVFRAAVPSGASTGVHEALELRDGDKAVHLGK 91
Query: 182 GVLTAIKNINELIAPELTKANLEVTQQREIDELMLKLDGTENKSKLGANAILGVSLTVAX 361
GVL A+ NINE IAP L +VT Q++ID+ M+ LDG+ENK LGANAILGVSL VA
Sbjct: 92 GVLKAVSNINEKIAPALIAKGFDVTAQKDIDDFMMALDGSENKGNLGANAILGVSLAVAK 151
Query: 362 AGAAKKNVPLYKHLADLAGNNDIVLPVPAFNVINGGSHAGNKLAMQEFMIFPTGASTFSE 541
AGA K +PLYK++A+LAG +VLPVPAFNVINGGSHAGNKLAMQEFMI P GAS+F+E
Sbjct: 152 AGAVHKGLPLYKYIAELAGTGKVVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASSFAE 211
Query: 542 AMRMGSEVYHHLKKIIKEKFGLDSTAVGD 628
AMRMGSEVYHHLK IK+++GLD+TAVGD
Sbjct: 212 AMRMGSEVYHHLKAEIKKRYGLDATAVGD 240
>Z68318-2|CAA92692.1| 434|Caenorhabditis elegans Hypothetical
protein T21B10.2a protein.
Length = 434
Score = 312 bits (766), Expect = 1e-85
Identities = 151/209 (72%), Positives = 173/209 (82%)
Frame = +2
Query: 2 MVIKSIKARQIFDSRGNPTVEVDLVTELGLFRAAVPSGASTGVHEALELRDNIKSEYHGK 181
M I I ARQI+DSRGNPTVEVDL TE G+FRAAVPSGASTGVHEALELRD K+ + GK
Sbjct: 1 MPITKIHARQIYDSRGNPTVEVDLFTEKGVFRAAVPSGASTGVHEALELRDGDKAVHLGK 60
Query: 182 GVLTAIKNINELIAPELTKANLEVTQQREIDELMLKLDGTENKSKLGANAILGVSLTVAX 361
GVL A+ NINE IAP L +VT Q++ID+ M+ LDG+ENK LGANAILGVSL VA
Sbjct: 61 GVLKAVSNINEKIAPALIAKGFDVTAQKDIDDFMMALDGSENKGNLGANAILGVSLAVAK 120
Query: 362 AGAAKKNVPLYKHLADLAGNNDIVLPVPAFNVINGGSHAGNKLAMQEFMIFPTGASTFSE 541
AGA K +PLYK++A+LAG +VLPVPAFNVINGGSHAGNKLAMQEFMI P GAS+F+E
Sbjct: 121 AGAVHKGLPLYKYIAELAGTGKVVLPVPAFNVINGGSHAGNKLAMQEFMILPVGASSFAE 180
Query: 542 AMRMGSEVYHHLKKIIKEKFGLDSTAVGD 628
AMRMGSEVYHHLK IK+++GLD+TAVGD
Sbjct: 181 AMRMGSEVYHHLKAEIKKRYGLDATAVGD 209
>Z68318-3|CAD57704.1| 337|Caenorhabditis elegans Hypothetical
protein T21B10.2b protein.
Length = 337
Score = 193 bits (471), Expect = 8e-50
Identities = 96/143 (67%), Positives = 111/143 (77%)
Frame = +2
Query: 2 MVIKSIKARQIFDSRGNPTVEVDLVTELGLFRAAVPSGASTGVHEALELRDNIKSEYHGK 181
M I I ARQI+DSRGNPTVEVDL TE G+FRAAVPSGASTGVHEALELRD K+ + GK
Sbjct: 1 MPITKIHARQIYDSRGNPTVEVDLFTEKGVFRAAVPSGASTGVHEALELRDGDKAVHLGK 60
Query: 182 GVLTAIKNINELIAPELTKANLEVTQQREIDELMLKLDGTENKSKLGANAILGVSLTVAX 361
GVL A+ NINE IAP L +VT Q++ID+ M+ LDG+ENK LGANAILGVSL VA
Sbjct: 61 GVLKAVSNINEKIAPALIAKGFDVTAQKDIDDFMMALDGSENKGNLGANAILGVSLAVAK 120
Query: 362 AGAAKKNVPLYKHLADLAGNNDI 430
AGA K +PLYK++A+LAG I
Sbjct: 121 AGAVHKGLPLYKYIAELAGTGKI 143
>Z82266-16|CAJ80812.1| 423|Caenorhabditis elegans Hypothetical
protein C01F6.6c protein.
Length = 423
Score = 28.7 bits (61), Expect = 3.6
Identities = 31/160 (19%), Positives = 62/160 (38%)
Frame = +2
Query: 134 EALELRDNIKSEYHGKGVLTAIKNINELIAPELTKANLEVTQQREIDELMLKLDGTENKS 313
E ++ R I E H ++ N P L +++V ++REI ++ T ++
Sbjct: 267 ERVDTRPVINVETHHHHEEVSVPKSNGYDVPPLNPHSIQVNEEREISKMT-----TTTRT 321
Query: 314 KLGANAILGVSLTVAXAGAAKKNVPLYKHLADLAGNNDIVLPVPAFNVINGGSHAGNKLA 493
+ N+ + A + + +H ++ P P N + G A +
Sbjct: 322 ETITNSNSAYQYKYVPSYATESHQKHEQHSQTHHHHHQHQQPSPLSNGSSHGYAASSTSG 381
Query: 494 MQEFMIFPTGASTFSEAMRMGSEVYHHLKKIIKEKFGLDS 613
+ I+ A E +RM + +H + + EK+ L S
Sbjct: 382 YDDDDIYHLSAREARERLRMKNRKHHLHEMSLNEKYQLVS 421
>Z68213-10|CAJ80816.1| 423|Caenorhabditis elegans Hypothetical
protein C01F6.6c protein.
Length = 423
Score = 28.7 bits (61), Expect = 3.6
Identities = 31/160 (19%), Positives = 62/160 (38%)
Frame = +2
Query: 134 EALELRDNIKSEYHGKGVLTAIKNINELIAPELTKANLEVTQQREIDELMLKLDGTENKS 313
E ++ R I E H ++ N P L +++V ++REI ++ T ++
Sbjct: 267 ERVDTRPVINVETHHHHEEVSVPKSNGYDVPPLNPHSIQVNEEREISKMT-----TTTRT 321
Query: 314 KLGANAILGVSLTVAXAGAAKKNVPLYKHLADLAGNNDIVLPVPAFNVINGGSHAGNKLA 493
+ N+ + A + + +H ++ P P N + G A +
Sbjct: 322 ETITNSNSAYQYKYVPSYATESHQKHEQHSQTHHHHHQHQQPSPLSNGSSHGYAASSTSG 381
Query: 494 MQEFMIFPTGASTFSEAMRMGSEVYHHLKKIIKEKFGLDS 613
+ I+ A E +RM + +H + + EK+ L S
Sbjct: 382 YDDDDIYHLSAREARERLRMKNRKHHLHEMSLNEKYQLVS 421
>U56864-1|AAB04059.1| 355|Caenorhabditis elegans EGL-30 protein.
Length = 355
Score = 28.3 bits (60), Expect = 4.8
Identities = 18/50 (36%), Positives = 24/50 (48%)
Frame = -1
Query: 612 ESNPNFSLMIFFKWWYTSEPILMASLKVDAPVGKIMNSCMASLFPACDPP 463
ES F +I + W+ S IL + K D KI+ S +A FP D P
Sbjct: 246 ESKALFRTIITYPWFTNSSVILFLNKK-DLLEEKILYSHLADYFPEYDGP 294
>AY008139-1|AAG32092.1| 355|Caenorhabditis elegans heterotrimeric G
protein alphasubunit protein.
Length = 355
Score = 28.3 bits (60), Expect = 4.8
Identities = 18/50 (36%), Positives = 24/50 (48%)
Frame = -1
Query: 612 ESNPNFSLMIFFKWWYTSEPILMASLKVDAPVGKIMNSCMASLFPACDPP 463
ES F +I + W+ S IL + K D KI+ S +A FP D P
Sbjct: 246 ESKALFRTIITYPWFTNSSVILFLNKK-DLLEEKILYSHLADYFPEYDGP 294
>AF003739-2|AAM15593.1| 303|Caenorhabditis elegans Egg laying
defective protein 30,isoform b protein.
Length = 303
Score = 28.3 bits (60), Expect = 4.8
Identities = 18/50 (36%), Positives = 24/50 (48%)
Frame = -1
Query: 612 ESNPNFSLMIFFKWWYTSEPILMASLKVDAPVGKIMNSCMASLFPACDPP 463
ES F +I + W+ S IL + K D KI+ S +A FP D P
Sbjct: 194 ESKALFRTIITYPWFTNSSVILFLNKK-DLLEEKILYSHLADYFPEYDGP 242
>AF003739-1|AAB58071.1| 355|Caenorhabditis elegans Egg laying
defective protein 30,isoform a protein.
Length = 355
Score = 28.3 bits (60), Expect = 4.8
Identities = 18/50 (36%), Positives = 24/50 (48%)
Frame = -1
Query: 612 ESNPNFSLMIFFKWWYTSEPILMASLKVDAPVGKIMNSCMASLFPACDPP 463
ES F +I + W+ S IL + K D KI+ S +A FP D P
Sbjct: 246 ESKALFRTIITYPWFTNSSVILFLNKK-DLLEEKILYSHLADYFPEYDGP 294
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,102,584
Number of Sequences: 27780
Number of extensions: 279178
Number of successful extensions: 870
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 849
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 870
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1385109898
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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