Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV32531
         (630 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ667183-1|ABG75735.1|  463|Apis mellifera GABA-gated ion channe...    22   5.7  
AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine beta-sy...    22   5.7  
AF393497-1|AAL60422.1|  143|Apis mellifera odorant binding prote...    21   7.5  
AB207270-1|BAE72137.1|  429|Apis mellifera broad-complex protein.      21   7.5  
L10710-1|AAA27730.1|  382|Apis mellifera hyaluronidase protein.        21   9.9  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             21   9.9  

>DQ667183-1|ABG75735.1|  463|Apis mellifera GABA-gated ion channel
           protein.
          Length = 463

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 10/28 (35%), Positives = 16/28 (57%), Gaps = 1/28 (3%)
 Frame = -1

Query: 459 ITLKAGTGRTMSLFPAKSAKC-LYSGTF 379
           +T+KAG    +  FP  + +C L  G+F
Sbjct: 124 LTIKAGCPMNLENFPMDTQRCPLQFGSF 151


>AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine
           beta-synthase protein.
          Length = 504

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 8/11 (72%), Positives = 9/11 (81%)
 Frame = -2

Query: 416 QPNQPSACTAE 384
           QPN+PS CT E
Sbjct: 5   QPNRPSYCTWE 15


>AF393497-1|AAL60422.1|  143|Apis mellifera odorant binding protein
           ASP5 protein.
          Length = 143

 Score = 21.4 bits (43), Expect = 7.5
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = +1

Query: 193 RNQKYQ*TDCS*TYQ 237
           RN++Y   DC  TYQ
Sbjct: 113 RNEEYTGDDCQKTYQ 127


>AB207270-1|BAE72137.1|  429|Apis mellifera broad-complex protein.
          Length = 429

 Score = 21.4 bits (43), Expect = 7.5
 Identities = 10/30 (33%), Positives = 16/30 (53%)
 Frame = -1

Query: 120 DAPEGTAARNKPSSVTRSTSTVGLPRESKI 31
           D P  +A+ N+  + +  TST     E+KI
Sbjct: 271 DRPPASASSNEHEAESEHTSTPNFLSEAKI 300


>L10710-1|AAA27730.1|  382|Apis mellifera hyaluronidase protein.
          Length = 382

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 9/15 (60%), Positives = 10/15 (66%), Gaps = 1/15 (6%)
 Frame = -2

Query: 428 CHYFQPNQPSA-CTA 387
           C+   PNQPSA C A
Sbjct: 221 CYNLTPNQPSAQCEA 235


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 8/20 (40%), Positives = 10/20 (50%)
 Frame = -2

Query: 143 QELHEHQWMHQRVQLPGTSQ 84
           Q+LH HQ  H + Q     Q
Sbjct: 812 QQLHHHQSTHPQAQAQAQPQ 831


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 169,163
Number of Sequences: 438
Number of extensions: 3307
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18826962
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)