Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV32528
(343 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U31851-1|AAC50244.1| 230|Homo sapiens dystonin isoform 2 protein. 31 1.2
BC100827-1|AAI00828.1| 727|Homo sapiens synaptic vesicle glycop... 31 1.2
BC100826-1|AAI00827.1| 727|Homo sapiens synaptic vesicle glycop... 31 1.2
BC100825-1|AAI00826.1| 727|Homo sapiens synaptic vesicle glycop... 31 1.2
BC100824-1|AAI00825.1| 727|Homo sapiens synaptic vesicle glycop... 31 1.2
AL590037-1|CAI12111.1| 689|Homo sapiens dystonin protein. 31 1.2
AL590005-1|CAI14987.1| 689|Homo sapiens dystonin protein. 31 1.2
AL512422-1|CAI14340.1| 689|Homo sapiens dystonin protein. 31 1.2
AL096710-1|CAI22042.1| 689|Homo sapiens dystonin protein. 31 1.2
AB028977-1|BAA83006.1| 480|Homo sapiens KIAA1054 protein protein. 31 1.2
CR457086-1|CAG33367.1| 683|Homo sapiens SV2B protein. 29 5.0
BC071562-1|AAH71562.2| 1235|Homo sapiens NOTCH2 protein protein. 29 5.0
BC030011-1|AAH30011.1| 683|Homo sapiens SV2B protein protein. 29 5.0
AL596222-1|CAH70182.1| 2471|Homo sapiens Notch homolog 2 (Drosop... 29 5.0
AL512503-1|CAH72483.1| 2471|Homo sapiens Notch homolog 2 (Drosop... 29 5.0
AL359752-4|CAI18974.1| 2471|Homo sapiens Notch homolog 2 (Drosop... 29 5.0
AF315356-1|AAG37073.1| 2471|Homo sapiens NOTCH2 protein protein. 29 5.0
AF308601-1|AAA36377.2| 2471|Homo sapiens NOTCH 2 protein. 29 5.0
AB018278-1|BAA34455.2| 707|Homo sapiens KIAA0735 protein protein. 29 5.0
BC128212-1|AAI28213.1| 172|Homo sapiens achaete-scute complex h... 28 6.6
BC128211-1|AAI28212.1| 172|Homo sapiens achaete-scute complex h... 28 6.6
AY238895-1|AAP69222.1| 172|Homo sapiens achaete-scute-like prot... 28 6.6
>U31851-1|AAC50244.1| 230|Homo sapiens dystonin isoform 2 protein.
Length = 230
Score = 30.7 bits (66), Expect = 1.2
Identities = 15/39 (38%), Positives = 21/39 (53%)
Frame = -3
Query: 296 RGGGVRAEPRHVRRHLADVRLGVVVRARPLVETIEHLRE 180
R G RA PRH+RR +A + +P+VE + H E
Sbjct: 76 RSEGFRASPRHLRRRVAAAAAARLEEVKPVVE-VHHQSE 113
>BC100827-1|AAI00828.1| 727|Homo sapiens synaptic vesicle
glycoprotein 2C protein.
Length = 727
Score = 30.7 bits (66), Expect = 1.2
Identities = 13/31 (41%), Positives = 19/31 (61%), Gaps = 2/31 (6%)
Frame = +3
Query: 156 GYYGLMMWFPEMFN--RFDEWSRTHDNAEAD 242
GYYGL +WFP++ + DE++ N E D
Sbjct: 446 GYYGLSVWFPDVIKPLQSDEYALLTRNVERD 476
>BC100826-1|AAI00827.1| 727|Homo sapiens synaptic vesicle
glycoprotein 2C protein.
Length = 727
Score = 30.7 bits (66), Expect = 1.2
Identities = 13/31 (41%), Positives = 19/31 (61%), Gaps = 2/31 (6%)
Frame = +3
Query: 156 GYYGLMMWFPEMFN--RFDEWSRTHDNAEAD 242
GYYGL +WFP++ + DE++ N E D
Sbjct: 446 GYYGLSVWFPDVIKPLQSDEYALLTRNVERD 476
>BC100825-1|AAI00826.1| 727|Homo sapiens synaptic vesicle
glycoprotein 2C protein.
Length = 727
Score = 30.7 bits (66), Expect = 1.2
Identities = 13/31 (41%), Positives = 19/31 (61%), Gaps = 2/31 (6%)
Frame = +3
Query: 156 GYYGLMMWFPEMFN--RFDEWSRTHDNAEAD 242
GYYGL +WFP++ + DE++ N E D
Sbjct: 446 GYYGLSVWFPDVIKPLQSDEYALLTRNVERD 476
>BC100824-1|AAI00825.1| 727|Homo sapiens synaptic vesicle
glycoprotein 2C protein.
Length = 727
Score = 30.7 bits (66), Expect = 1.2
Identities = 13/31 (41%), Positives = 19/31 (61%), Gaps = 2/31 (6%)
Frame = +3
Query: 156 GYYGLMMWFPEMFN--RFDEWSRTHDNAEAD 242
GYYGL +WFP++ + DE++ N E D
Sbjct: 446 GYYGLSVWFPDVIKPLQSDEYALLTRNVERD 476
>AL590037-1|CAI12111.1| 689|Homo sapiens dystonin protein.
Length = 689
Score = 30.7 bits (66), Expect = 1.2
Identities = 15/39 (38%), Positives = 21/39 (53%)
Frame = -3
Query: 296 RGGGVRAEPRHVRRHLADVRLGVVVRARPLVETIEHLRE 180
R G RA PRH+RR +A + +P+VE + H E
Sbjct: 70 RSEGFRASPRHLRRRVAAAAAARLEEVKPVVE-VHHQSE 107
>AL590005-1|CAI14987.1| 689|Homo sapiens dystonin protein.
Length = 689
Score = 30.7 bits (66), Expect = 1.2
Identities = 15/39 (38%), Positives = 21/39 (53%)
Frame = -3
Query: 296 RGGGVRAEPRHVRRHLADVRLGVVVRARPLVETIEHLRE 180
R G RA PRH+RR +A + +P+VE + H E
Sbjct: 70 RSEGFRASPRHLRRRVAAAAAARLEEVKPVVE-VHHQSE 107
>AL512422-1|CAI14340.1| 689|Homo sapiens dystonin protein.
Length = 689
Score = 30.7 bits (66), Expect = 1.2
Identities = 15/39 (38%), Positives = 21/39 (53%)
Frame = -3
Query: 296 RGGGVRAEPRHVRRHLADVRLGVVVRARPLVETIEHLRE 180
R G RA PRH+RR +A + +P+VE + H E
Sbjct: 70 RSEGFRASPRHLRRRVAAAAAARLEEVKPVVE-VHHQSE 107
>AL096710-1|CAI22042.1| 689|Homo sapiens dystonin protein.
Length = 689
Score = 30.7 bits (66), Expect = 1.2
Identities = 15/39 (38%), Positives = 21/39 (53%)
Frame = -3
Query: 296 RGGGVRAEPRHVRRHLADVRLGVVVRARPLVETIEHLRE 180
R G RA PRH+RR +A + +P+VE + H E
Sbjct: 70 RSEGFRASPRHLRRRVAAAAAARLEEVKPVVE-VHHQSE 107
>AB028977-1|BAA83006.1| 480|Homo sapiens KIAA1054 protein protein.
Length = 480
Score = 30.7 bits (66), Expect = 1.2
Identities = 13/31 (41%), Positives = 19/31 (61%), Gaps = 2/31 (6%)
Frame = +3
Query: 156 GYYGLMMWFPEMFN--RFDEWSRTHDNAEAD 242
GYYGL +WFP++ + DE++ N E D
Sbjct: 199 GYYGLSVWFPDVIKPLQSDEYALLTRNVERD 229
>CR457086-1|CAG33367.1| 683|Homo sapiens SV2B protein.
Length = 683
Score = 28.7 bits (61), Expect = 5.0
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = +3
Query: 159 YYGLMMWFPEMFNRFDE 209
YYGL +WFP+M F +
Sbjct: 404 YYGLTVWFPDMIRYFQD 420
>BC071562-1|AAH71562.2| 1235|Homo sapiens NOTCH2 protein protein.
Length = 1235
Score = 28.7 bits (61), Expect = 5.0
Identities = 16/50 (32%), Positives = 24/50 (48%), Gaps = 1/50 (2%)
Frame = -1
Query: 322 SECMCESHCAAAEC-VPNRVTYDVTSQMSASALSCVRDHSSKRLNISGNH 176
S+C+C S A A C VPN V+ D+ + + + HS +N H
Sbjct: 1085 SQCLCPSGWAGAYCDVPN-VSCDIAASRRGVLVEHLCQHSGVCINAGNTH 1133
>BC030011-1|AAH30011.1| 683|Homo sapiens SV2B protein protein.
Length = 683
Score = 28.7 bits (61), Expect = 5.0
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = +3
Query: 159 YYGLMMWFPEMFNRFDE 209
YYGL +WFP+M F +
Sbjct: 404 YYGLTVWFPDMIRYFQD 420
>AL596222-1|CAH70182.1| 2471|Homo sapiens Notch homolog 2 (Drosophila)
protein.
Length = 2471
Score = 28.7 bits (61), Expect = 5.0
Identities = 16/50 (32%), Positives = 24/50 (48%), Gaps = 1/50 (2%)
Frame = -1
Query: 322 SECMCESHCAAAEC-VPNRVTYDVTSQMSASALSCVRDHSSKRLNISGNH 176
S+C+C S A A C VPN V+ D+ + + + HS +N H
Sbjct: 1085 SQCLCPSGWAGAYCDVPN-VSCDIAASRRGVLVEHLCQHSGVCINAGNTH 1133
>AL512503-1|CAH72483.1| 2471|Homo sapiens Notch homolog 2 (Drosophila)
protein.
Length = 2471
Score = 28.7 bits (61), Expect = 5.0
Identities = 16/50 (32%), Positives = 24/50 (48%), Gaps = 1/50 (2%)
Frame = -1
Query: 322 SECMCESHCAAAEC-VPNRVTYDVTSQMSASALSCVRDHSSKRLNISGNH 176
S+C+C S A A C VPN V+ D+ + + + HS +N H
Sbjct: 1085 SQCLCPSGWAGAYCDVPN-VSCDIAASRRGVLVEHLCQHSGVCINAGNTH 1133
>AL359752-4|CAI18974.1| 2471|Homo sapiens Notch homolog 2 (Drosophila)
protein.
Length = 2471
Score = 28.7 bits (61), Expect = 5.0
Identities = 16/50 (32%), Positives = 24/50 (48%), Gaps = 1/50 (2%)
Frame = -1
Query: 322 SECMCESHCAAAEC-VPNRVTYDVTSQMSASALSCVRDHSSKRLNISGNH 176
S+C+C S A A C VPN V+ D+ + + + HS +N H
Sbjct: 1085 SQCLCPSGWAGAYCDVPN-VSCDIAASRRGVLVEHLCQHSGVCINAGNTH 1133
>AF315356-1|AAG37073.1| 2471|Homo sapiens NOTCH2 protein protein.
Length = 2471
Score = 28.7 bits (61), Expect = 5.0
Identities = 16/50 (32%), Positives = 24/50 (48%), Gaps = 1/50 (2%)
Frame = -1
Query: 322 SECMCESHCAAAEC-VPNRVTYDVTSQMSASALSCVRDHSSKRLNISGNH 176
S+C+C S A A C VPN V+ D+ + + + HS +N H
Sbjct: 1085 SQCLCPSGWAGAYCDVPN-VSCDIAASRRGVLVEHLCQHSGVCINAGNTH 1133
>AF308601-1|AAA36377.2| 2471|Homo sapiens NOTCH 2 protein.
Length = 2471
Score = 28.7 bits (61), Expect = 5.0
Identities = 16/50 (32%), Positives = 24/50 (48%), Gaps = 1/50 (2%)
Frame = -1
Query: 322 SECMCESHCAAAEC-VPNRVTYDVTSQMSASALSCVRDHSSKRLNISGNH 176
S+C+C S A A C VPN V+ D+ + + + HS +N H
Sbjct: 1085 SQCLCPSGWAGAYCDVPN-VSCDIAASRRGVLVEHLCQHSGVCINAGNTH 1133
>AB018278-1|BAA34455.2| 707|Homo sapiens KIAA0735 protein protein.
Length = 707
Score = 28.7 bits (61), Expect = 5.0
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = +3
Query: 159 YYGLMMWFPEMFNRFDE 209
YYGL +WFP+M F +
Sbjct: 428 YYGLTVWFPDMIRYFQD 444
>BC128212-1|AAI28213.1| 172|Homo sapiens achaete-scute complex
homolog 4 (Drosophila) protein.
Length = 172
Score = 28.3 bits (60), Expect = 6.6
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = -3
Query: 266 HVRRHLADVRLGVVVRARPLVETIEHLRE 180
H+ R LAD RL V R ++ I+HL+E
Sbjct: 98 HLPRELADKRLSKVETLRAAIDYIKHLQE 126
>BC128211-1|AAI28212.1| 172|Homo sapiens achaete-scute complex
homolog 4 (Drosophila) protein.
Length = 172
Score = 28.3 bits (60), Expect = 6.6
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = -3
Query: 266 HVRRHLADVRLGVVVRARPLVETIEHLRE 180
H+ R LAD RL V R ++ I+HL+E
Sbjct: 98 HLPRELADKRLSKVETLRAAIDYIKHLQE 126
>AY238895-1|AAP69222.1| 172|Homo sapiens achaete-scute-like protein
4 protein.
Length = 172
Score = 28.3 bits (60), Expect = 6.6
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = -3
Query: 266 HVRRHLADVRLGVVVRARPLVETIEHLRE 180
H+ R LAD RL V R ++ I+HL+E
Sbjct: 98 HLPRELADKRLSKVETLRAAIDYIKHLQE 126
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 38,703,131
Number of Sequences: 237096
Number of extensions: 648975
Number of successful extensions: 1944
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 1904
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1944
length of database: 76,859,062
effective HSP length: 80
effective length of database: 57,891,382
effective search space used: 1910415606
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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