Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV32527
         (590 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z70270-4|CAA94225.1|  615|Caenorhabditis elegans Hypothetical pr...    30   1.4  
U52003-8|AAM97990.1|  441|Caenorhabditis elegans Hypothetical pr...    29   2.5  
U52003-7|AAM97989.1|  555|Caenorhabditis elegans Hypothetical pr...    29   2.5  
AL021489-2|CAA16370.1|  333|Caenorhabditis elegans Hypothetical ...    28   5.7  
L39927-1|AAA98784.1|  344|Caenorhabditis elegans cathepsin B-lik...    27   7.5  
L39896-1|AAA98786.1|  344|Caenorhabditis elegans cathepsin B-lik...    27   7.5  
AF016426-3|AAB65346.1|  344|Caenorhabditis elegans Cysteine prot...    27   7.5  

>Z70270-4|CAA94225.1|  615|Caenorhabditis elegans Hypothetical
           protein C53D6.6 protein.
          Length = 615

 Score = 29.9 bits (64), Expect = 1.4
 Identities = 12/19 (63%), Positives = 12/19 (63%)
 Frame = +3

Query: 207 LRNVLIVCFGCYHWNSKDR 263
           LRNV  V  GCY WN  DR
Sbjct: 168 LRNVEYVGLGCYSWNKDDR 186


>U52003-8|AAM97990.1|  441|Caenorhabditis elegans Hypothetical
           protein ZK381.5b protein.
          Length = 441

 Score = 29.1 bits (62), Expect = 2.5
 Identities = 14/31 (45%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
 Frame = -3

Query: 213 CVEVKRSSTRTFSR*ACKLT-SSEQPHSDQG 124
           C++   SS+ TFS   C+L+ SS+ PH  QG
Sbjct: 178 CLKCFHSSSSTFSCTTCRLSFSSDTPHMSQG 208


>U52003-7|AAM97989.1|  555|Caenorhabditis elegans Hypothetical
           protein ZK381.5a protein.
          Length = 555

 Score = 29.1 bits (62), Expect = 2.5
 Identities = 14/31 (45%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
 Frame = -3

Query: 213 CVEVKRSSTRTFSR*ACKLT-SSEQPHSDQG 124
           C++   SS+ TFS   C+L+ SS+ PH  QG
Sbjct: 292 CLKCFHSSSSTFSCTTCRLSFSSDTPHMSQG 322


>AL021489-2|CAA16370.1|  333|Caenorhabditis elegans Hypothetical
           protein Y44A6C.2 protein.
          Length = 333

 Score = 27.9 bits (59), Expect = 5.7
 Identities = 8/28 (28%), Positives = 20/28 (71%)
 Frame = +2

Query: 233 WVLPLELEGSPRQYVFVVSTDYFDTEIN 316
           W++P +LE    + V++  +D++D+++N
Sbjct: 169 WMVPSDLEEMENKIVYLDKSDFYDSDMN 196


>L39927-1|AAA98784.1|  344|Caenorhabditis elegans cathepsin B-like
           cysteine proteinaseprotein.
          Length = 344

 Score = 27.5 bits (58), Expect = 7.5
 Identities = 12/37 (32%), Positives = 21/37 (56%)
 Frame = -1

Query: 287 IPRTRIVGAILRVPVVAPKTDYEDVA*K*NDRVPGHF 177
           IP+ +I   ++ V  + P  D + VA + +D +P HF
Sbjct: 50  IPKEKITKKLMDVKYLVPHKDEDIVATEVSDAIPDHF 86


>L39896-1|AAA98786.1|  344|Caenorhabditis elegans cathepsin B-like
           cysteine proteinaseprotein.
          Length = 344

 Score = 27.5 bits (58), Expect = 7.5
 Identities = 12/37 (32%), Positives = 21/37 (56%)
 Frame = -1

Query: 287 IPRTRIVGAILRVPVVAPKTDYEDVA*K*NDRVPGHF 177
           IP+ +I   ++ V  + P  D + VA + +D +P HF
Sbjct: 50  IPKEKITKKLMDVKYLVPHKDEDIVATEVSDAIPDHF 86


>AF016426-3|AAB65346.1|  344|Caenorhabditis elegans Cysteine
           protease related protein 5 protein.
          Length = 344

 Score = 27.5 bits (58), Expect = 7.5
 Identities = 12/37 (32%), Positives = 21/37 (56%)
 Frame = -1

Query: 287 IPRTRIVGAILRVPVVAPKTDYEDVA*K*NDRVPGHF 177
           IP+ +I   ++ V  + P  D + VA + +D +P HF
Sbjct: 50  IPKEKITKKLMDVKYLVPHKDEDIVATEVSDAIPDHF 86


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,981,091
Number of Sequences: 27780
Number of extensions: 235460
Number of successful extensions: 452
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 447
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 452
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1247656244
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)