Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV32515
         (303 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF134820-1|AAD40235.1|  166|Apis mellifera putative Ets-family p...    21   3.3  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             21   3.3  
AY855337-1|AAW47987.1|  510|Apis mellifera tyrosine hydroxylase ...    20   7.7  
AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    20   7.7  
AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice...    20   7.7  
AY268030-1|AAP23055.1|  602|Apis mellifera dorsal protein protein.     20   7.7  
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    20   7.7  

>AF134820-1|AAD40235.1|  166|Apis mellifera putative Ets-family
           protein protein.
          Length = 166

 Score = 21.0 bits (42), Expect = 3.3
 Identities = 11/28 (39%), Positives = 15/28 (53%)
 Frame = +2

Query: 2   PSFTIEEPCIASRSILPRSLISKHQCAE 85
           PSF+  E C  S + LP  +   HQ A+
Sbjct: 140 PSFSTGERCRISSNFLPNKM---HQVAK 164


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 21.0 bits (42), Expect = 3.3
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = +1

Query: 70  ASVCRISLTGHAPIVIASVYLPP 138
           ASV   +LTG  P ++    LPP
Sbjct: 469 ASVVAAALTGTYPTLLPQWCLPP 491


>AY855337-1|AAW47987.1|  510|Apis mellifera tyrosine hydroxylase
           protein.
          Length = 510

 Score = 19.8 bits (39), Expect = 7.7
 Identities = 10/28 (35%), Positives = 13/28 (46%)
 Frame = +2

Query: 59  LISKHQCAESH*RDTRRSLSRPFIFHRI 142
           L+ KH CAE      +    + F  HRI
Sbjct: 250 LVPKHACAEYRRNFKKMQEEKIFEPHRI 277


>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
           receptor 1 protein.
          Length = 843

 Score = 19.8 bits (39), Expect = 7.7
 Identities = 7/10 (70%), Positives = 7/10 (70%)
 Frame = +1

Query: 211 LNCKHIRWNS 240
           L   HIRWNS
Sbjct: 504 LAINHIRWNS 513


>AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice
           variant B protein.
          Length = 810

 Score = 19.8 bits (39), Expect = 7.7
 Identities = 8/21 (38%), Positives = 10/21 (47%)
 Frame = -3

Query: 301 YRRRDHRLTRQAACHSGLWCV 239
           YR   H L  + AC  G+  V
Sbjct: 109 YRPHPHNLVGKEACKQGVCTV 129


>AY268030-1|AAP23055.1|  602|Apis mellifera dorsal protein protein.
          Length = 602

 Score = 19.8 bits (39), Expect = 7.7
 Identities = 8/21 (38%), Positives = 10/21 (47%)
 Frame = -3

Query: 301 YRRRDHRLTRQAACHSGLWCV 239
           YR   H L  + AC  G+  V
Sbjct: 109 YRPHPHNLVGKEACKQGVCTV 129


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 19.8 bits (39), Expect = 7.7
 Identities = 7/10 (70%), Positives = 7/10 (70%)
 Frame = +1

Query: 211 LNCKHIRWNS 240
           L   HIRWNS
Sbjct: 594 LAINHIRWNS 603


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 82,125
Number of Sequences: 438
Number of extensions: 1641
Number of successful extensions: 8
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 49
effective length of database: 124,881
effective search space used:  6368931
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)