Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV32513
         (738 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_01_0102 + 769442-770159,770710-770805,771340-771363,771470-77...    30   2.2  
09_02_0535 - 10346395-10346705,10347100-10347175,10348931-103490...    28   6.7  
02_01_0362 + 2607097-2607371,2607766-2608612,2608842-2608910,260...    28   8.9  
01_01_0117 + 864966-865686,866860-866883,867006-868063                 28   8.9  
01_01_0106 + 788967-789555,790139-790162,790339-791411                 28   8.9  

>01_01_0102 +
           769442-770159,770710-770805,771340-771363,771470-772542
          Length = 636

 Score = 29.9 bits (64), Expect = 2.2
 Identities = 11/24 (45%), Positives = 14/24 (58%)
 Frame = +3

Query: 204 LLRNVLIVCFGCYHWNSKDRPDNT 275
           ++R + IV   C  WN KDRP  T
Sbjct: 584 MVRQLAIVALWCIQWNPKDRPSMT 607


>09_02_0535 -
           10346395-10346705,10347100-10347175,10348931-10349070,
           10349294-10349578,10349677-10349718,10350963-10351461,
           10351557-10351723,10352128-10352412,10352695-10352836
          Length = 648

 Score = 28.3 bits (60), Expect = 6.7
 Identities = 13/43 (30%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
 Frame = -2

Query: 383 LRSERFVLTLSHKALRALIVTL-R*FQCRNNRSIPRTRIVGAI 258
           L+   F+     K L  +++T+ + F C+ N+S  RT + GA+
Sbjct: 498 LKLSEFLTYAKDKELSGIMITIEQWFHCKENQSRERTAVCGAV 540


>02_01_0362 +
           2607097-2607371,2607766-2608612,2608842-2608910,
           2609968-2610202,2610454-2610536,2610924-2611046,
           2611326-2611379
          Length = 561

 Score = 27.9 bits (59), Expect = 8.9
 Identities = 16/74 (21%), Positives = 35/74 (47%)
 Frame = +2

Query: 14  IEEHHDLFIIYCYQN*IISS*LAHDYVTPSWRQSWIRPWSECGCSELVSLQAYLENVRVL 193
           + + H  +I   +Q+ ++S  L+H Y   +W Q+  R    C  +E  S  + ++  R+ 
Sbjct: 293 VGDQHGDWIAIAHQHPLLSMQLSHGYRISNWSQATYRRDGYCHRTEPGSKYSIVQTHRIY 352

Query: 194 DRFTSTQRPHSLFW 235
            ++     P ++ W
Sbjct: 353 HQYFPRTLP-AMMW 365


>01_01_0117 + 864966-865686,866860-866883,867006-868063
          Length = 600

 Score = 27.9 bits (59), Expect = 8.9
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = +3

Query: 204 LLRNVLIVCFGCYHWNSKDRPDNT 275
           ++R + IV   C  WN K+RP  T
Sbjct: 548 MVRQLAIVALWCIQWNPKNRPSMT 571


>01_01_0106 + 788967-789555,790139-790162,790339-791411
          Length = 561

 Score = 27.9 bits (59), Expect = 8.9
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = +3

Query: 207 LRNVLIVCFGCYHWNSKDRPDNT 275
           +R + IV   C  WN K+RP  T
Sbjct: 510 VRKLAIVALWCIQWNPKNRPSTT 532


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,331,236
Number of Sequences: 37544
Number of extensions: 355665
Number of successful extensions: 734
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 724
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 734
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1945321620
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)