Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= maV32500
(559 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81054-12|CAB61006.1| 1781|Caenorhabditis elegans Hypothetical p... 32 0.32
Z81032-6|CAB60991.1| 1781|Caenorhabditis elegans Hypothetical pr... 32 0.32
AF038576-1|AAC38973.1| 1781|Caenorhabditis elegans CED-5 protein. 32 0.32
AF519108-1|AAM74222.1| 909|Caenorhabditis elegans EOR-1 protein. 29 2.3
AF502568-1|AAM74151.1| 909|Caenorhabditis elegans EOR-1 protein. 29 2.3
AF100669-8|AAK39268.1| 909|Caenorhabditis elegans Egl-1 suppres... 29 2.3
Z93392-1|CAB07687.2| 1737|Caenorhabditis elegans Hypothetical pr... 28 5.2
Z83219-9|CAB05699.2| 1737|Caenorhabditis elegans Hypothetical pr... 28 5.2
Z81562-1|CAB04560.2| 367|Caenorhabditis elegans Hypothetical pr... 28 5.2
AL032648-9|CAB54460.1| 1737|Caenorhabditis elegans Hypothetical ... 28 5.2
Z81562-7|CAB04561.1| 367|Caenorhabditis elegans Hypothetical pr... 27 6.9
AF016685-7|AAG24151.1| 341|Caenorhabditis elegans Seven tm rece... 27 6.9
Z81457-5|CAB03817.2| 584|Caenorhabditis elegans Hypothetical pr... 27 9.1
>Z81054-12|CAB61006.1| 1781|Caenorhabditis elegans Hypothetical
protein C02F4.1 protein.
Length = 1781
Score = 31.9 bits (69), Expect = 0.32
Identities = 12/34 (35%), Positives = 22/34 (64%)
Frame = +2
Query: 233 KNV*MFHNEKPMYANELKISLVICSPQNFALRFL 334
K++ ++H +KPM+ +KI+L C+ + LR L
Sbjct: 469 KSIVVYHTDKPMWTEPIKIALPSCASHDVYLRIL 502
>Z81032-6|CAB60991.1| 1781|Caenorhabditis elegans Hypothetical
protein C02F4.1 protein.
Length = 1781
Score = 31.9 bits (69), Expect = 0.32
Identities = 12/34 (35%), Positives = 22/34 (64%)
Frame = +2
Query: 233 KNV*MFHNEKPMYANELKISLVICSPQNFALRFL 334
K++ ++H +KPM+ +KI+L C+ + LR L
Sbjct: 469 KSIVVYHTDKPMWTEPIKIALPSCASHDVYLRIL 502
>AF038576-1|AAC38973.1| 1781|Caenorhabditis elegans CED-5 protein.
Length = 1781
Score = 31.9 bits (69), Expect = 0.32
Identities = 12/34 (35%), Positives = 22/34 (64%)
Frame = +2
Query: 233 KNV*MFHNEKPMYANELKISLVICSPQNFALRFL 334
K++ ++H +KPM+ +KI+L C+ + LR L
Sbjct: 469 KSIVVYHTDKPMWTEPIKIALPSCASHDVYLRIL 502
>AF519108-1|AAM74222.1| 909|Caenorhabditis elegans EOR-1 protein.
Length = 909
Score = 29.1 bits (62), Expect = 2.3
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = +1
Query: 64 RTHTAARGHFTHLCTRSYIKRLTSRRSPRAH 156
RTH A R H +C R +I++ R R H
Sbjct: 616 RTHMAVRAHLCKICGRGFIEKSHLVRHERIH 646
>AF502568-1|AAM74151.1| 909|Caenorhabditis elegans EOR-1 protein.
Length = 909
Score = 29.1 bits (62), Expect = 2.3
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = +1
Query: 64 RTHTAARGHFTHLCTRSYIKRLTSRRSPRAH 156
RTH A R H +C R +I++ R R H
Sbjct: 616 RTHMAVRAHLCKICGRGFIEKSHLVRHERIH 646
>AF100669-8|AAK39268.1| 909|Caenorhabditis elegans Egl-1
suppressor/dio uptake defective/raf enhancer protein 1
protein.
Length = 909
Score = 29.1 bits (62), Expect = 2.3
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = +1
Query: 64 RTHTAARGHFTHLCTRSYIKRLTSRRSPRAH 156
RTH A R H +C R +I++ R R H
Sbjct: 616 RTHMAVRAHLCKICGRGFIEKSHLVRHERIH 646
>Z93392-1|CAB07687.2| 1737|Caenorhabditis elegans Hypothetical
protein Y48E1A.1a protein.
Length = 1737
Score = 27.9 bits (59), Expect = 5.2
Identities = 10/15 (66%), Positives = 12/15 (80%)
Frame = +2
Query: 110 VRTLKGLLREGPHAH 154
V +KGLLR+GPH H
Sbjct: 516 VNEMKGLLRQGPHQH 530
>Z83219-9|CAB05699.2| 1737|Caenorhabditis elegans Hypothetical
protein Y48E1A.1a protein.
Length = 1737
Score = 27.9 bits (59), Expect = 5.2
Identities = 10/15 (66%), Positives = 12/15 (80%)
Frame = +2
Query: 110 VRTLKGLLREGPHAH 154
V +KGLLR+GPH H
Sbjct: 516 VNEMKGLLRQGPHQH 530
>Z81562-1|CAB04560.2| 367|Caenorhabditis elegans Hypothetical
protein K03D7.2 protein.
Length = 367
Score = 27.9 bits (59), Expect = 5.2
Identities = 13/35 (37%), Positives = 22/35 (62%), Gaps = 2/35 (5%)
Frame = -1
Query: 496 HVFCIRLLLYTI--VFHETIVLFKCSKAINFKVFM 398
HV + L++ T+ V H TI+ KC +A++ VF+
Sbjct: 36 HVHFVALIVGTVLGVIHLTILTRKCMRALSINVFL 70
>AL032648-9|CAB54460.1| 1737|Caenorhabditis elegans Hypothetical
protein Y48E1A.1a protein.
Length = 1737
Score = 27.9 bits (59), Expect = 5.2
Identities = 10/15 (66%), Positives = 12/15 (80%)
Frame = +2
Query: 110 VRTLKGLLREGPHAH 154
V +KGLLR+GPH H
Sbjct: 516 VNEMKGLLRQGPHQH 530
>Z81562-7|CAB04561.1| 367|Caenorhabditis elegans Hypothetical
protein K03D7.11 protein.
Length = 367
Score = 27.5 bits (58), Expect = 6.9
Identities = 13/35 (37%), Positives = 21/35 (60%), Gaps = 2/35 (5%)
Frame = -1
Query: 496 HVFCIRLLLYTI--VFHETIVLFKCSKAINFKVFM 398
HV + L++ T+ V H TI+ KC +A+ VF+
Sbjct: 36 HVHFVALIVGTVLGVIHLTILTRKCMRALRINVFL 70
>AF016685-7|AAG24151.1| 341|Caenorhabditis elegans Seven tm
receptor protein 86 protein.
Length = 341
Score = 27.5 bits (58), Expect = 6.9
Identities = 18/65 (27%), Positives = 29/65 (44%), Gaps = 4/65 (6%)
Frame = +2
Query: 266 MYANELKISLVICSP-QNFALRFLITAISIGFCKMIYLQYLSLVLH---KYFKINSFRTF 433
M A+ + S V+ + + R+L I FC + L LV+H +Y + F+
Sbjct: 61 MMAHSTETSFVVFDLYEGYVSRYLAPIFLIDFCAFYFTLILLLVVHFIYRYVVVCDFKKM 120
Query: 434 EQNNG 448
E NG
Sbjct: 121 EYFNG 125
>Z81457-5|CAB03817.2| 584|Caenorhabditis elegans Hypothetical
protein C01G12.7 protein.
Length = 584
Score = 27.1 bits (57), Expect = 9.1
Identities = 10/35 (28%), Positives = 20/35 (57%)
Frame = +2
Query: 350 IGFCKMIYLQYLSLVLHKYFKINSFRTFEQNNGFM 454
IGF +I++ YL++ K++ N R+ E ++
Sbjct: 198 IGFALLIFVMYLAIFCFKFYWNNKTRSIEWGRSYV 232
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,126,098
Number of Sequences: 27780
Number of extensions: 283249
Number of successful extensions: 638
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 626
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 638
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1144922904
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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