Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV32487
         (543 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U58755-10|AAB00699.1| 2761|Caenorhabditis elegans Hypothetical p...    29   2.2  
AC024848-4|AAK68543.2| 1020|Caenorhabditis elegans Hypothetical ...    29   2.2  
Z99286-2|CAH60793.1|  310|Caenorhabditis elegans Hypothetical pr...    28   3.8  
AF000196-7|AAC24251.2|  706|Caenorhabditis elegans Hypothetical ...    28   5.0  
Z72511-3|CAA96657.1|  610|Caenorhabditis elegans Hypothetical pr...    27   8.7  
AC006672-7|AAM98004.1|  668|Caenorhabditis elegans Hypothetical ...    27   8.7  

>U58755-10|AAB00699.1| 2761|Caenorhabditis elegans Hypothetical
            protein C34D4.14 protein.
          Length = 2761

 Score = 29.1 bits (62), Expect = 2.2
 Identities = 21/68 (30%), Positives = 29/68 (42%), Gaps = 5/68 (7%)
 Frame = +1

Query: 46   SVTKPKPAGTDDGFKGEGAACGTSVVKVAHQMISSRSPRGFTVASPSEDATAPDPQHY-- 219
            SV    PAGT       G A G   +   + +   +   G +VAS  + A+A   QH   
Sbjct: 1686 SVKNTTPAGTPSSGGSSGGAIGKKSMSTTNLVDERQKTSGPSVASTGQAASAESLQHQTP 1745

Query: 220  ---NLMAR 234
               NL+AR
Sbjct: 1746 SLENLLAR 1753


>AC024848-4|AAK68543.2| 1020|Caenorhabditis elegans Hypothetical
            protein Y67D8A.1 protein.
          Length = 1020

 Score = 29.1 bits (62), Expect = 2.2
 Identities = 14/54 (25%), Positives = 22/54 (40%), Gaps = 1/54 (1%)
 Frame = +3

Query: 195  HRSGPPAL*PDGTSRQQESPRHAGSLAPFQSHHQEEEEWQ-PLLHITVRANRRP 353
            HR   P +   G +  ++  RH G  +    HH   ++ Q PLL +       P
Sbjct: 933  HRGKMPKIAYTGRASSEKKKRHVGGSSSSSQHHHHHQQQQTPLLRLATPLTPEP 986


>Z99286-2|CAH60793.1|  310|Caenorhabditis elegans Hypothetical
           protein Y7A9C.8 protein.
          Length = 310

 Score = 28.3 bits (60), Expect = 3.8
 Identities = 17/47 (36%), Positives = 26/47 (55%)
 Frame = -2

Query: 152 REDII*CATFTTEVPHAAPSPLKPSSVPAGFGFVTEFTAVLIGAMPW 12
           +E II C  F++ V +    P KP   P  +GF+  F A+L  +MP+
Sbjct: 159 KEFIILCV-FSSRVKYERVDPYKP---PCYYGFILFFHALLFFSMPF 201


>AF000196-7|AAC24251.2|  706|Caenorhabditis elegans Hypothetical
           protein B0041.2a protein.
          Length = 706

 Score = 27.9 bits (59), Expect = 5.0
 Identities = 15/60 (25%), Positives = 25/60 (41%)
 Frame = +3

Query: 138 DDIFSVSARVHGGVAVRGRHRSGPPAL*PDGTSRQQESPRHAGSLAPFQSHHQEEEEWQP 317
           DD++  S    G     G H S  P     G ++ Q   R  G    ++ + Q +++ QP
Sbjct: 123 DDLYDPSGYGGGAGGGGGHHPSHMPPYGQRGNNQNQYGNRMQGGQGGYRGNQQRQQQQQP 182


>Z72511-3|CAA96657.1|  610|Caenorhabditis elegans Hypothetical
           protein F55A11.3 protein.
          Length = 610

 Score = 27.1 bits (57), Expect = 8.7
 Identities = 19/61 (31%), Positives = 26/61 (42%), Gaps = 2/61 (3%)
 Frame = +1

Query: 28  INTAVNSVTKPKPAGTDDGFKGEGAACGTSVVKVAHQMI--SSRSPRGFTVASPSEDATA 201
           I  A  +  +P+P    D  + E     T  V    Q I  +S +P  F   SPS  +TA
Sbjct: 510 IQLATVTPIRPRPVVPSDESEQEAPGPSTDQVTSEEQEIPATSSAPSIFRTESPSTSSTA 569

Query: 202 P 204
           P
Sbjct: 570 P 570


>AC006672-7|AAM98004.1|  668|Caenorhabditis elegans Hypothetical
           protein K08D12.6 protein.
          Length = 668

 Score = 27.1 bits (57), Expect = 8.7
 Identities = 18/63 (28%), Positives = 25/63 (39%)
 Frame = +1

Query: 22  APINTAVNSVTKPKPAGTDDGFKGEGAACGTSVVKVAHQMISSRSPRGFTVASPSEDATA 201
           AP   A  +   P PA TD G++ +  A G   V  A    ++ +P    V        A
Sbjct: 516 APAPAAAPAPAAPAPAATDSGYRSKRNAYGDEQVTPA-PAAAAEAPADAPVEQAPVAVPA 574

Query: 202 PDP 210
           P P
Sbjct: 575 PAP 577


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.310    0.126    0.369 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,729,815
Number of Sequences: 27780
Number of extensions: 218064
Number of successful extensions: 634
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 609
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 633
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1091917214
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)