Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV32479
         (325 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z68213-3|CAA92438.1|  223|Caenorhabditis elegans Hypothetical pr...    29   0.58 
AL031632-7|CAA21009.2| 1528|Caenorhabditis elegans Hypothetical ...    27   2.3  
Z92815-4|CAB07294.2| 2175|Caenorhabditis elegans Hypothetical pr...    27   4.1  
U67953-4|AAL13329.1|  732|Caenorhabditis elegans Hypothetical pr...    27   4.1  
AL031635-5|CAA21042.1| 1113|Caenorhabditis elegans Hypothetical ...    27   4.1  
AC024811-5|AAF60775.1|  285|Caenorhabditis elegans Collagen prot...    26   5.4  
Z81118-1|CAB03329.1|  478|Caenorhabditis elegans Hypothetical pr...    26   7.2  
Z78065-1|CAD54154.1|  547|Caenorhabditis elegans Hypothetical pr...    26   7.2  
AJ000537-1|CAA04170.1|  478|Caenorhabditis elegans GluClalpha2B ...    26   7.2  
Z79696-1|CAB01972.1| 1584|Caenorhabditis elegans Hypothetical pr...    25   9.5  
Z75541-4|CAA99858.1|  146|Caenorhabditis elegans Hypothetical pr...    25   9.5  
Z66563-2|CAA91469.3| 2557|Caenorhabditis elegans Hypothetical pr...    25   9.5  
Z22178-2|CAA80154.1|  261|Caenorhabditis elegans Hypothetical pr...    25   9.5  
U97552-8|AAB52863.2|  131|Caenorhabditis elegans Hypothetical pr...    25   9.5  
AF047661-4|AAC04435.2|  931|Caenorhabditis elegans Hypothetical ...    25   9.5  

>Z68213-3|CAA92438.1|  223|Caenorhabditis elegans Hypothetical
           protein C01F6.5 protein.
          Length = 223

 Score = 29.5 bits (63), Expect = 0.58
 Identities = 11/22 (50%), Positives = 18/22 (81%)
 Frame = -1

Query: 307 GTSGPPQRPGAQAQRETLGVRS 242
           GT+GP +RP AQ +R++ G+R+
Sbjct: 38  GTAGPSRRPTAQPRRQSGGIRT 59


>AL031632-7|CAA21009.2| 1528|Caenorhabditis elegans Hypothetical
           protein Y32B12B.4 protein.
          Length = 1528

 Score = 27.5 bits (58), Expect = 2.3
 Identities = 14/35 (40%), Positives = 17/35 (48%)
 Frame = -2

Query: 291 HRGPAPRHSEKHSASEADRAERLLPGALRDAPSPE 187
           H GP     E+H  +E D  E LL G L D P  +
Sbjct: 258 HSGPVAMKMEEHEETEEDFLE-LLNGTLDDVPDSD 291


>Z92815-4|CAB07294.2| 2175|Caenorhabditis elegans Hypothetical
           protein W01F3.3 protein.
          Length = 2175

 Score = 26.6 bits (56), Expect = 4.1
 Identities = 13/33 (39%), Positives = 18/33 (54%)
 Frame = -3

Query: 296 TTTEARRPGTARNTRRPKPTELSVCCRERSETP 198
           TTT  +RP T   T  P+P E     +E++E P
Sbjct: 163 TTTTTKRPPTTTTTEDPQPFEFHE-LQEQAENP 194


>U67953-4|AAL13329.1|  732|Caenorhabditis elegans Hypothetical
           protein ZC13.3 protein.
          Length = 732

 Score = 26.6 bits (56), Expect = 4.1
 Identities = 9/16 (56%), Positives = 13/16 (81%)
 Frame = -3

Query: 278 RPGTARNTRRPKPTEL 231
           RP T + T++PKPTE+
Sbjct: 189 RPWTVKQTKKPKPTEV 204


>AL031635-5|CAA21042.1| 1113|Caenorhabditis elegans Hypothetical
           protein Y47D3B.7 protein.
          Length = 1113

 Score = 26.6 bits (56), Expect = 4.1
 Identities = 10/37 (27%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
 Frame = -2

Query: 303 HQDHHRGPAPRHSEKHSASEA-DRAERLLPGALRDAP 196
           +  HH+ P P H   H   +  +  E++   ++ DAP
Sbjct: 220 YSQHHQSPPPHHHHHHPMPKIHENPEQVASPSIEDAP 256


>AC024811-5|AAF60775.1|  285|Caenorhabditis elegans Collagen protein
           48 protein.
          Length = 285

 Score = 26.2 bits (55), Expect = 5.4
 Identities = 11/20 (55%), Positives = 12/20 (60%)
 Frame = -1

Query: 325 GAEP*AGTSGPPQRPGAQAQ 266
           G +   G SGPP RPGA  Q
Sbjct: 205 GGDAPPGPSGPPGRPGAPGQ 224


>Z81118-1|CAB03329.1|  478|Caenorhabditis elegans Hypothetical
           protein R11G10.1b protein.
          Length = 478

 Score = 25.8 bits (54), Expect = 7.2
 Identities = 11/25 (44%), Positives = 14/25 (56%)
 Frame = -2

Query: 303 HQDHHRGPAPRHSEKHSASEADRAE 229
           H  H R  +  HS KH+AS +D  E
Sbjct: 19  HAYHSRPKSEEHSPKHAASSSDLFE 43


>Z78065-1|CAD54154.1|  547|Caenorhabditis elegans Hypothetical
           protein T09E8.1d protein.
          Length = 547

 Score = 25.8 bits (54), Expect = 7.2
 Identities = 12/27 (44%), Positives = 13/27 (48%), Gaps = 1/27 (3%)
 Frame = -2

Query: 321 QSREQGHQDHHRGPAPRH-SEKHSASE 244
           Q+    H  HH  PAPRH S  H   E
Sbjct: 31  QNGNSHHHHHHLPPAPRHLSSSHHQIE 57


>AJ000537-1|CAA04170.1|  478|Caenorhabditis elegans GluClalpha2B
           protein protein.
          Length = 478

 Score = 25.8 bits (54), Expect = 7.2
 Identities = 11/25 (44%), Positives = 14/25 (56%)
 Frame = -2

Query: 303 HQDHHRGPAPRHSEKHSASEADRAE 229
           H  H R  +  HS KH+AS +D  E
Sbjct: 19  HAYHSRPKSEEHSPKHAASSSDLFE 43


>Z79696-1|CAB01972.1| 1584|Caenorhabditis elegans Hypothetical
           protein F54F3.1 protein.
          Length = 1584

 Score = 25.4 bits (53), Expect = 9.5
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = -2

Query: 321 QSREQGHQDHHRGPAPRHSEKHS 253
           Q++EQ HQ HH+   P+   + S
Sbjct: 328 QAQEQHHQQHHQPDQPQQQPQRS 350


>Z75541-4|CAA99858.1|  146|Caenorhabditis elegans Hypothetical
           protein F52B5.6 protein.
          Length = 146

 Score = 25.4 bits (53), Expect = 9.5
 Identities = 11/38 (28%), Positives = 20/38 (52%)
 Frame = -3

Query: 314 VSRDIRTTTEARRPGTARNTRRPKPTELSVCCRERSET 201
           V +++RT+   RRP T    R P+    S   R++ ++
Sbjct: 26  VRKNVRTSVHFRRPKTLVTARAPRYARKSAPARDKLDS 63


>Z66563-2|CAA91469.3| 2557|Caenorhabditis elegans Hypothetical protein
            F46C3.3 protein.
          Length = 2557

 Score = 25.4 bits (53), Expect = 9.5
 Identities = 13/42 (30%), Positives = 18/42 (42%)
 Frame = -2

Query: 321  QSREQGHQDHHRGPAPRHSEKHSASEADRAERLLPGALRDAP 196
            QSR + H   HR   P   E++ A  +   + L P   R  P
Sbjct: 1499 QSRHRTHDRSHRHHVPSGVERYMAKRSPSVDILKPPMSRRTP 1540


>Z22178-2|CAA80154.1|  261|Caenorhabditis elegans Hypothetical
           protein F54C8.2 protein.
          Length = 261

 Score = 25.4 bits (53), Expect = 9.5
 Identities = 12/28 (42%), Positives = 19/28 (67%), Gaps = 1/28 (3%)
 Frame = +2

Query: 194 DGASLSAPGSKRSALSASDAECF-SLCL 274
           DG+SL +  SKR+ L+ +D + +  LCL
Sbjct: 231 DGSSLISAHSKRATLTTTDVQLYRRLCL 258


>U97552-8|AAB52863.2|  131|Caenorhabditis elegans Hypothetical
           protein W05H7.1 protein.
          Length = 131

 Score = 25.4 bits (53), Expect = 9.5
 Identities = 11/39 (28%), Positives = 20/39 (51%)
 Frame = -3

Query: 320 RAVSRDIRTTTEARRPGTARNTRRPKPTELSVCCRERSE 204
           RA+ R  + T + R+    R  +R +  ++   CRER +
Sbjct: 79  RAIRRQKKLTQKRRKMLVEREVKRRRVAKMFFACRERRQ 117


>AF047661-4|AAC04435.2|  931|Caenorhabditis elegans Hypothetical
           protein M70.1 protein.
          Length = 931

 Score = 25.4 bits (53), Expect = 9.5
 Identities = 11/20 (55%), Positives = 14/20 (70%)
 Frame = -2

Query: 261 KHSASEADRAERLLPGALRD 202
           KHSASEA R E+L+  +  D
Sbjct: 376 KHSASEAARLEKLIENSRND 395


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,535,178
Number of Sequences: 27780
Number of extensions: 104750
Number of successful extensions: 558
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 483
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 557
length of database: 12,740,198
effective HSP length: 71
effective length of database: 10,767,818
effective search space used: 387641448
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)