Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV32476
         (683 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014298-1861|AAF48238.3|  625|Drosophila melanogaster CG12723-P...    30   2.6  
AY118534-1|AAM49903.1|  331|Drosophila melanogaster LD26412p pro...    29   5.9  
AE014134-777|AAF50977.1|  331|Drosophila melanogaster CG2976-PA ...    29   5.9  
AY071278-1|AAL48900.1|  347|Drosophila melanogaster RE30702p pro...    29   7.8  

>AE014298-1861|AAF48238.3|  625|Drosophila melanogaster CG12723-PA
           protein.
          Length = 625

 Score = 30.3 bits (65), Expect = 2.6
 Identities = 13/34 (38%), Positives = 19/34 (55%)
 Frame = -3

Query: 354 TEAPQDLSTKILADAVPEAVIVTAPEAETAITTG 253
           T     L  + +A++ P A +VT PE E  +TTG
Sbjct: 51  TSEDAPLQEESVAESAPTASVVTEPETEVEVTTG 84


>AY118534-1|AAM49903.1|  331|Drosophila melanogaster LD26412p
           protein.
          Length = 331

 Score = 29.1 bits (62), Expect = 5.9
 Identities = 10/18 (55%), Positives = 13/18 (72%)
 Frame = +2

Query: 617 NNSFWNPRYLIINYFGST 670
           NNS WN R+ +I +FG T
Sbjct: 186 NNSAWNQRFFVIKHFGFT 203


>AE014134-777|AAF50977.1|  331|Drosophila melanogaster CG2976-PA
           protein.
          Length = 331

 Score = 29.1 bits (62), Expect = 5.9
 Identities = 10/18 (55%), Positives = 13/18 (72%)
 Frame = +2

Query: 617 NNSFWNPRYLIINYFGST 670
           NNS WN R+ +I +FG T
Sbjct: 186 NNSAWNQRFFVIKHFGFT 203


>AY071278-1|AAL48900.1|  347|Drosophila melanogaster RE30702p
           protein.
          Length = 347

 Score = 28.7 bits (61), Expect = 7.8
 Identities = 14/52 (26%), Positives = 20/52 (38%)
 Frame = +1

Query: 364 CWFSHNLGCCSGFYFNSFRAHQCLVINYFGSTCSR*RLNWIIYNHSRCCNNS 519
           C  +HN  C +  Y      H  L  N   + C+    N    NH+  C N+
Sbjct: 214 CTNNHNNLCTNNHYNLCTNNHNNLCTNNHNNLCTNNHYNLCTNNHNNLCTNN 265


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,770,020
Number of Sequences: 53049
Number of extensions: 385458
Number of successful extensions: 1150
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1047
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1149
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2992560750
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)