Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= maV32476
         (683 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z69664-5|CAE17882.2|  360|Caenorhabditis elegans Hypothetical pr...    31   0.77 
AF039053-3|AAC25880.2|  349|Caenorhabditis elegans Hypothetical ...    28   5.4  
Z99288-1|CAB16545.2|  339|Caenorhabditis elegans Hypothetical pr...    27   9.4  
Z81086-2|CAB03121.3| 1045|Caenorhabditis elegans Hypothetical pr...    27   9.4  
AF106573-5|AAF02104.2|  358|Caenorhabditis elegans Seven tm rece...    27   9.4  
AF016687-5|AAC48093.1|  709|Caenorhabditis elegans Hypothetical ...    27   9.4  

>Z69664-5|CAE17882.2|  360|Caenorhabditis elegans Hypothetical
           protein K04D7.6 protein.
          Length = 360

 Score = 31.1 bits (67), Expect = 0.77
 Identities = 23/54 (42%), Positives = 27/54 (50%), Gaps = 2/54 (3%)
 Frame = +2

Query: 419 ELTNASSLITSVALAP--VEDSIGSFTTTAGAATIVLEPTDTSSLITSVTLASR 574
           E T    LI   AL P   E SI   TTTA A  IV EPT +SS    + + S+
Sbjct: 258 EATPVFILIAFGALMPDLKEWSISKTTTTAEATIIVTEPTSSSSSNRPIPIVSQ 311


>AF039053-3|AAC25880.2|  349|Caenorhabditis elegans Hypothetical
           protein C45H4.13 protein.
          Length = 349

 Score = 28.3 bits (60), Expect = 5.4
 Identities = 14/37 (37%), Positives = 21/37 (56%)
 Frame = +1

Query: 175 YGFRFNNHNFFCNYFWLNSF*VNCRRSCGYSSFSLWG 285
           YG+ +NN+ +  NY+  NS+     RSC   S+S  G
Sbjct: 311 YGYGYNNNYYSGNYYCCNSY-----RSCWRQSYSCSG 342


>Z99288-1|CAB16545.2|  339|Caenorhabditis elegans Hypothetical
           protein ZK262.1 protein.
          Length = 339

 Score = 27.5 bits (58), Expect = 9.4
 Identities = 12/27 (44%), Positives = 15/27 (55%)
 Frame = +1

Query: 145 SCSGFCSDSFYGFRFNNHNFFCNYFWL 225
           SC  F + S  G   N  N FCN+FW+
Sbjct: 107 SCQ-FLTISIAGIFENRFNTFCNFFWV 132


>Z81086-2|CAB03121.3| 1045|Caenorhabditis elegans Hypothetical
           protein F53B6.2a protein.
          Length = 1045

 Score = 27.5 bits (58), Expect = 9.4
 Identities = 13/43 (30%), Positives = 19/43 (44%), Gaps = 1/43 (2%)
 Frame = +1

Query: 391 CSGFYFNSFRAHQCLVINYFGSTCSR*RLNW-IIYNHSRCCNN 516
           C G   +SFR   C V    G TC   +  W +   ++ C +N
Sbjct: 135 CDGLISSSFRFDACGVCGGRGDTCDNGKFIWKVSEEYTACASN 177


>AF106573-5|AAF02104.2|  358|Caenorhabditis elegans Seven tm
           receptor protein 79 protein.
          Length = 358

 Score = 27.5 bits (58), Expect = 9.4
 Identities = 17/54 (31%), Positives = 23/54 (42%)
 Frame = +1

Query: 190 NNHNFFCNYFWLNSF*VNCRRSCGYSSFSLWGCYNYSFRYSICENFRTQILWRF 351
           N  NF C   W+          CGYS  SL     ++FR+ +  N    + WRF
Sbjct: 85  NRFNFPCLGVWM--LLATNWICCGYSILSLNA--QFAFRWIVMSNSGKNLFWRF 134


>AF016687-5|AAC48093.1|  709|Caenorhabditis elegans Hypothetical
           protein T21D12.11 protein.
          Length = 709

 Score = 27.5 bits (58), Expect = 9.4
 Identities = 22/75 (29%), Positives = 35/75 (46%)
 Frame = +2

Query: 428 NASSLITSVALAPVEDSIGSFTTTAGAATIVLEPTDTSSLITSVTLASR*RLNYIIYNNS 607
           N+SS      L P   S+GS + ++ AA+ +      SSLI S T       + +  +N+
Sbjct: 90  NSSSSSVGAGLTPGNGSVGSTSNSSSAASSIQNIGLNSSLINSNTNNLSSSSHSMSGSNN 149

Query: 608 RCCNNSFWNPRYLII 652
              NN+  N  YL +
Sbjct: 150 NNSNNNVVN-NYLTV 163


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,432,735
Number of Sequences: 27780
Number of extensions: 212892
Number of successful extensions: 592
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 550
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 590
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1560745544
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)